LOC110530936 (LOC106573926)


Basic Information

Item Value
gene id LOC110530936
gene name LOC106573926
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 15976376 ~ 15990475 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952238.1
CAGTCGCATGTACTTTTCCCTCTTCTGTGAGAGGGTGGGACTCCAGTAGTTTACATGACATTGGCTGAACTTTGCCTGTGCTGTAAGGTGCTCAAGAGACcgtaatatatatatagagttaGAGCGATAGATAGAAAGTGGGAGACAAGACATCAGACAGAGAAGAAAAACTGTTTGTCTTGTTCGCTGTATACCGCTTAAGAGACTCTCAGTTGCCGCATCTGatgattaccaggatgtgttgACCCAGAATGAGGGAGACCTGATAGGGTGCCACTCTCTCCTGCTTAGTGCCTCAGAAATCTCACTGTCTACACAGGAAGACACCACAACCCAAGGAACCACGGACAGCACACCCAGAAAGTGGCTGCTGCAGCCCATGTCACCCAAATTGGAGCAGACAACAGATCTTCGCACCATGCTCAGCCCCACCACGGACGAGCCCTTCAGCCTGGACCAGAGCTGGACCTACAACAGGAATGGCAACTCTTCTGCTTTCAGTTTCGACAGCATCTCCGTAAACCACACCCGGTCCACGGTTGTCGTATCTTCCCAGCAAAAAGaggtgcaggccaggcaggtGGTGGTGTCGGAGGAAAACTGCGGCATCACCAGCGAAGACTGGCAAGCCAGCAGCTCTAGCAGTCCCAGCAGCACAGGCTCCTACTGCGGGTTCTACTCATTCGTGGACAATCCTGCAAGCCCCGAGGCAGAGCTGAATGAAGCCTGGACGTTGTCCCCGGAAAGGCAAGCCACCCTGAAAGAGGAACACAGCTTCAAACTGCAGACGTATGTTGGTGGGAAGAAGCCAGGGAGTCTGTTCAAGGAGGACAAGGACTCCCGCTACCAGGTGAAAACAGACAACGGTGCCCAATtgaaggcagaggaggaggagaagaaactTGGGAAGGAGATCATGCATAGTCATGCCCCCCCAAAAACTGCCACCTACAAGGAACAGTGGAGTGCACTGAGCTTGTCACCCAACAAGCTGCTGGAAGGGTTCAGCTTGTGCTATGGTCCAACCAGTAGTAAATCTGAGCCCACACCAGCAGCCGAGGCTGGTACCATCGACAATGAGCAGATAAACTTCAGCGCAGCGCGAGAGCAGTTCCTAAAGATGGAACAGTCCAGGCTCAACCCCTTTCTGCAGAGTCCCAGCTCTCTAAAACCACAAGGAAGACGGTGGCAGTCAGAAGACAGCTTGCTATCACCAAAGAGTGCAAAAAAAGAAGACCACTCTACAGTATGGTTGAACCAAAGTCCGACACCAGTGAAACAGCAGGATGAAGGGGAAGTCATCACTGCCGGAAAGGTGACAGTGTACCACACAGAGGAGAAGGTAACCAAGAGCCAGGGTAGTCTGCTTTATGACCTTGACTCTGGACTGGAGGATCTATCAGGGGACCCCAGTGTTGGCTACACAAGTGATGTAAGCATATCCAATGACAACTCTCAACCAGAAAGCAAGGCCACCCAATCGGTAAGTGGTCACAGAGAGACGCCCATTGAGAGGGAGATTCGTATCactcaggagagagaggagagccttCGGAAATTGCGGGGTATTAAGCACACCGATGTCCAGGAGATGGTGGAGATCAAGACCAAGTATCTGCTCTCCCAGCCTGCACCACCACGGACACCTGTCAGGTCCAAAGAGAATAATCGGGTGAGCTTCTTCATCCAGCGCGAGATTGAAAAGGACAGCCAGAGGGAAGTGGACCTGATGCACCAGGGGAGAGTCCCAAGTCTGTATGACAGGGGAACTCCACAGGAACTGGAGGATAGGAAGAAGATCTTTGAGCTGCCAGACCAACCTGGAGCCAAGGAGAAGAGGAAAAGGGCTTGGTCTTCACCCAGGGTCAATGGGAGGAGTAGCAGCTCAGATAGGGAAGGATTCCCTTCCACTTGCTTCCCTAACCGGCACTCAGAAGAGACAGAGTTGTACATCAGCCACATGAACACCGCTCCAAGCGTCAATACCACCAGCAAAGGCTGGGGTTCAGATTCCCAAGACTTCACCAGAGTACTGCCAAGTAGCCTCCCAGAGGAGAGTGTTACATTGAAAGGCCATGAGACCACAAAGGCGGCAAGCTCTAAAGTCACAATAGTGGTGAAGACGACAAGTACTAGCGAAATAGTAAATGACCCATCGTGGTTAGTGCAAAGAAAGGAGCCAGTTCCAGCCAAAAGCTCCTCAGCTAAAGAAGCCTCCTTTTCGTACTCTCCGTCCTCCCCTACACCCACTGCTTCTGCAGTTCAGGGGTCTGAGCCGAATGATAAGCTTTTTCAAACCTGGAGGGCGCACCTGAATTCTGGTAGCCCGAGACCTCAAAGACCAAATGCTCCAGATGTTATCCAGAAGGAGATTGAGCAGGATCTAAAACGCGAGCAGGAGCACCGGGAACTCCGGGAATCCTGTGGCCTGTCCGCCTCTATGGAAGGAAACCTGGACTGTGTAGGACGAGACGCTAAAGACACACATCAATCGCAAAGCCTGCAAAGGGTCATCGTGGAACAGGAAGACTCTGTCTTCTATGAGAGCCCTTCACTTCTTGTAGAGCAGACAAGCTTGACCAGACGGCCCTCTTCCTTTATCACTCCAGTATCAATGCTAGATAAAACAGACAGCGCAGCTCCCTTTTCCCCTTCCATTCGTCCCACTGCCCGACTTCCCTCCTTTTCCATAGTGACCGCCCAGCCATGGGGCTGTCCAAGGCCCACCTCCCCCGTGGATAGCAGGGTTTCCCCCATGTTGCCTGCCAGCCCATGGGCAGAGACAGGTGGCTCCCCTGGGACACCCACACAAAAGGGCCTGACCGAGACATTGCTAGAGGattttgaggagaggagagtcaaactgaagctggaagaGAACGCTTATGCAGGAATTCAGTGCATTGATGATGTGAATAATGAGGTCTTGGAGGCCACCCGGATCACCAGGCACAAAAACAAGCGGGCACTGCGCTGGGAGGCTGGTGACTACACCAACGAGTACCAGTCCTCTCCCCTGGAGGGCATGGTGAGAGAGGGCagaaaggagaagagatgaaAAACAGTCATCTTAGGGTTGTCCCATCTCAGCACATATGAATATACGCTCTGACTACACACTACCAAACCTGCTGGACATATTGATTGGTCCACTTTGTGATAAACTCCTCATCCATCAACATCAGCCACCTACTAGAGCAGGTGACCTTCCACGATTTAAAAGAAAAAAGACAAGTGAactgaaaaaaaatattcaaTAAAGACAGGACAAGTTTTAAATGCCATCGGAGGTGGATTGCAGGAAGGGAATTTAAGAGGAGTTCTGTGCCTGCTAAGAATGCACATTAGCGTATGAGTTATTTTTAAGTCTGGCAGTCACTGGCTGCTAGGTAACTTTGATTAGGCCTATCCGCCTTCAAATGACTGCATAGAAAAAAATGACAGAGCTATTTTTGTCTTGTCAGTTGTGCTTTGCAAAGCAAAAACAAGCAAGAAACCATCAGATATCCATGATGTACGGTTTTATATGGTTCAAATTTCCAAACCAATATCCAATCCAATGAAGCACTTGCAGTACCGTCTTCTAGAAATGTTGACATTTGTCTGATTATTATATTAATTAAGAGCTACAGCAGATAGCAGTATGTTTGTGTTCTTAATTTGACTTGAATGTGCTTTGACGGCAGAAATTAGTATACAACTTCTGACCTAACTGGTCAGGTCCTTATTGCCTTTcttagggctcgattcaatccgtatcACGTACAATCTGCAGTGTAGCGTGATTGAAATTGAAAAGGCAATGTTAACGCAGTCAACTACATTCATAGTAAATGCTGCacgtcggctcaatcggaaatgacgGTACCTTTACATTTTAATTGTGCCATCTTCTGTGACatggattgaatcgagcccttgTGAGATATGTACAGTTAGAAAGATTCCTTGCTTACCAGTCGGCTACTGTAAATGACAAACAAGTTTGATCACACTCTAAACCTGACTGTTTGCAACATGACAAGACATGCTTTTTATATAGACTATTGTAAGAGATACTGCTGAAAATAGGCCAGGTAATGTAGATCTTATAAGAGATTCAACTCTGCTACATTTGGTGGCAATGGTGGGATCCACTACTTATACAAGCGGTGACGTCAAATCGGATGCAATGTGGAAGTTGATCAAATGATAGTGAATCTCAAACTATCAAATGGGGTAAAACGTCGCCATCTGCTGGGTAGACAATTGAACTGCTTGTAGGGGATTTGAGAGTGTCGCTGTAAAGTTAAAACATATTTAATCCCTATTTACACCTTGCATTAACATGATAGTCCAATTGTAGGAATACATCTCGTCTGAAAAAAAGTAGAGATGAGTTATACTTCATGGGTTTGAAGGACAATGATGTATCCCAATTTCACCCACATTCATGCATCAGTGTGCCTGTACCCTAAAGCTGTTGCAGTATAGGGAACTGCTAGGCACAACACAAACCAAATCCCCACCCACCCCCCATGACCTTCCCCTCTAATTTGtttgagaaagaggagagaggacacaagGAATTGAGGAGAGACTGCAGTCGATTTTAAAAGCGAGTCAAGTCTAAcggatctacaaatcaccttatTTCATAAATAACTACAATTGTTTTTTCAGTCGGTCATAATTTAGCTATGAAAAATCACAGTTTTGATGCTCTTGAACACTGCCAATAATTTACTTTCTCATTCCAGCCGGGATTCAATCCGACCGTATATGGTCGATCGACAATGCAGCTTTAAAAGGTAGATGCCGATTGAGTCATTGCAGCTTTGCCCGTGAATATGATCTCCACGAacgcaggaacattgcctttaaaagctgcAATGCCTCGAACCCACAATTGGATAGAATCCCGACCTCAAATGTTTGACAGCACTGGCAGAACGAATGTGATTGGTTGGATGAAAGCTCAGTGCGCAGAGCTGAGTGACAGGTCAGTAGATGGAGTTTACAGGTaagagtcaaataaagaaaaGGCTCTCAGGGAGGGAGGTTGGAGGGCGCAAGGTCGCCAGTTTAAATACCATTGTGGCTTTTGTTTCCCAACCTTAAAAATACTTAACTAATCACATTTCTAATCTACTGGCCTTCTAAATGACTTGACAGCTTCATATGTGAAAAGAGAGGCACCCATCCCCATGCTGGCGCAGTGGACTAGGCACTGGGAAAGGGACCAGAAGGTCCCAGGCCCTAATCTTGCCTCGCTTTCATAGATCAAATAAATTTGTTCTATacta

Function

NR:

description
mitotic interactor and substrate of PLK1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952238.1 True 5285 mRNA 0.48 5 15976376 15990475

Neighbor

gene id symbol gene type direction distance location
ga45b LOC106573930 coding downstream 69237 15905184 ~ 15907139 (-)
LOC110490301 LOC106573931 coding downstream 293514 15638971 ~ 15682862 (-)
zgc:113223 LOC106573933 coding downstream 354735 15616446 ~ 15621641 (-)
LOC110490009 LOC106573934 coding downstream 381071 15588932 ~ 15595305 (-)
LOC110490068 LOC106573935 coding downstream 388996 15582052 ~ 15587380 (-)
LOC110490953 LOC106613612 coding upstream 4961 15995436 ~ 16075800 (-)
LOC110531327 LOC106573923 coding upstream 124317 16114792 ~ 16136293 (-)
LOC110491230 med16 coding upstream 159237 16149712 ~ 16157809 (-)
LOC110531395 LOC106613616 coding upstream 191039 16181514 ~ 16295527 (-)
LOC118941184 NA coding upstream 329280 16319755 ~ 16335818 (-)
G15067 NA non-coding downstream 21801 15954347 ~ 15954575 (-)
G14772 NA non-coding downstream 74690 15901457 ~ 15901686 (-)
G14763 NA non-coding downstream 78206 15897580 ~ 15898170 (-)
G14757 NA non-coding downstream 84946 15891223 ~ 15891430 (-)
G14749 NA non-coding downstream 95252 15880836 ~ 15881124 (-)
G15117 NA non-coding upstream 52949 16043424 ~ 16044070 (-)
G15194 LOC106573922 non-coding upstream 187802 16178277 ~ 16181159 (-)
G15199 NA non-coding upstream 194570 16185045 ~ 16185275 (-)
G15325 NA non-coding upstream 383171 16373646 ~ 16374031 (-)
LOC110488740 cdc14a other downstream 635495 15325555 ~ 15394233 (-)
LOC110488330 LOC106613586 other downstream 792834 15175297 ~ 15183693 (-)
G14120 antithrombin other downstream 802346 15114926 ~ 15174030 (-)
LOC110487385 LOC106574065 other downstream 1017108 14955950 ~ 14959313 (-)
G13196 LOC106574055 other downstream 1608043 14366290 ~ 14368501 (-)
G15470 NA other upstream 540572 16531047 ~ 16531476 (-)
LOC110492105 homer3 other upstream 870174 16838135 ~ 16871992 (-)
G16100 LOC106573897 other upstream 1140945 17131420 ~ 17136357 (-)
G16161 LOC106573901 other upstream 1264761 17255236 ~ 17257241 (-)

Expression


Co-expression Network