Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110490953 |
| gene name | LOC106613612 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 15995436 ~ 16075800 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| paralemmin-1-like isoform X1 |
| id | description |
|---|---|
| K16519 | AKAP2; A-kinase anchor protein 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036952535.1 | False | 6471 | mRNA | 0.43 | 7 | 15995436 | 16075795 |
| XM_036952453.1 | False | 6628 | mRNA | 0.43 | 9 | 15995436 | 16075796 |
| XM_036952484.1 | False | 6550 | mRNA | 0.43 | 8 | 15995436 | 16075796 |
| XM_036952508.1 | False | 6550 | mRNA | 0.43 | 8 | 15995436 | 16075796 |
| XM_036952292.1 | False | 6762 | mRNA | 0.44 | 10 | 15995436 | 16075798 |
| XM_036952353.1 | False | 6684 | mRNA | 0.43 | 9 | 15995436 | 16075798 |
| XM_036952414.1 | True | 6683 | mRNA | 0.44 | 9 | 15995436 | 16075800 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530936 | LOC106573926 | coding | downstream | 4961 | 15976376 ~ 15990475 (-) |
| ga45b | LOC106573930 | coding | downstream | 88297 | 15905184 ~ 15907139 (-) |
| LOC110490301 | LOC106573931 | coding | downstream | 312574 | 15638971 ~ 15682862 (-) |
| zgc:113223 | LOC106573933 | coding | downstream | 373795 | 15616446 ~ 15621641 (-) |
| LOC110490009 | LOC106573934 | coding | downstream | 400131 | 15588932 ~ 15595305 (-) |
| LOC110531327 | LOC106573923 | coding | upstream | 38992 | 16114792 ~ 16136293 (-) |
| LOC110491230 | med16 | coding | upstream | 73912 | 16149712 ~ 16157809 (-) |
| LOC110531395 | LOC106613616 | coding | upstream | 105714 | 16181514 ~ 16295527 (-) |
| LOC118941184 | NA | coding | upstream | 243955 | 16319755 ~ 16335818 (-) |
| LOC110531543 | NA | coding | upstream | 263447 | 16339247 ~ 16415642 (-) |
| G15067 | NA | non-coding | downstream | 40861 | 15954347 ~ 15954575 (-) |
| G14772 | NA | non-coding | downstream | 93750 | 15901457 ~ 15901686 (-) |
| G14763 | NA | non-coding | downstream | 97266 | 15897580 ~ 15898170 (-) |
| G14757 | NA | non-coding | downstream | 104006 | 15891223 ~ 15891430 (-) |
| G14749 | NA | non-coding | downstream | 114312 | 15880836 ~ 15881124 (-) |
| G15194 | LOC106573922 | non-coding | upstream | 102477 | 16178277 ~ 16181159 (-) |
| G15199 | NA | non-coding | upstream | 109245 | 16185045 ~ 16185275 (-) |
| G15325 | NA | non-coding | upstream | 297846 | 16373646 ~ 16374031 (-) |
| G15348 | NA | non-coding | upstream | 312527 | 16388327 ~ 16388623 (-) |
| LOC110488740 | cdc14a | other | downstream | 654555 | 15325555 ~ 15394233 (-) |
| LOC110488330 | LOC106613586 | other | downstream | 811894 | 15175297 ~ 15183693 (-) |
| G14120 | antithrombin | other | downstream | 821406 | 15114926 ~ 15174030 (-) |
| LOC110487385 | LOC106574065 | other | downstream | 1036168 | 14955950 ~ 14959313 (-) |
| G13196 | LOC106574055 | other | downstream | 1627103 | 14366290 ~ 14368501 (-) |
| G15470 | NA | other | upstream | 455247 | 16531047 ~ 16531476 (-) |
| LOC110492105 | homer3 | other | upstream | 784849 | 16838135 ~ 16871992 (-) |
| G16100 | LOC106573897 | other | upstream | 1055620 | 17131420 ~ 17136357 (-) |
| G16161 | LOC106573901 | other | upstream | 1179436 | 17255236 ~ 17257241 (-) |
