LOC110493709 (LOC106573901)


Basic Information

Item Value
gene id LOC110493709
gene name LOC106573901
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 17244353 ~ 17256260 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021568167.2
GCTCTGTCTTTCTACCTGACAAAAAACAAGAGTATGCTGACATTTCTCTCCCCACAGTTTCATTTACAAGAAGAGTAACTGAAACAGGTTTGAGGACATCTGCATGGAACAGTGTTAACAGTCCAGCAAACCCACGTCTCCTTGGCTATACGCAGACGGATCAACCCTGGATAACCACCTGTTTGGACACTTTACACACTAACTCCCTCAGGGGGTTGTTGAGGTGATGGAGGCAAAGGAACACTGGTCCCTGCCAAGGTTTCTGGTTCTTGCTATGGTAATAGCTCAAGGGACAACTTGTAAATGTCTTTCTAGTCCTCAATGCTACAAGAAAACTGAAAAAGCTACCACCTATACGTGTGAATGGACGTCTGGGTCTATGCAAAATGCCACCTATGAGCTTTTTTACAAGCGCTCCAATTCTACGGAAAATAAAAAATCATTGGGCAAAAATCAGCAGAGCTATATCTTTGTGAATGACGATAAAGTGCTCGAAAAAGTGCCCGTGGATCTATGGGTGGTTGCTTATATGGGCAACTGGAGCTGCCAGTCACTCAGTACCTCTGTTCGACTTAATGAAAGTgTTAAGTATGAAGCGCCCCAAAATATGTCTATGTCAAGATCCTCAAGTAATCTTACCCTCAGCTGGGTTAACAAGGAAGAAGTGAAAAATCACATGCCGGAAGATGTTGTATTAGAGGTCAAGTTCAGCACATTAGAGAAAACCTCCGGGGTATGGAACACAACTGAAACAGAAGTCAAACAAGCCATGGTCACTCTGGAGATTCTCCAGAACCAACACATGTACCAACTGCAGGTCAGACAAAAGTCCAAGCATGTCAAACGTCCCCTGTGGAGCGACTGGACTCCAATCTTGGACGTTCCCACTGAAATCCAAAATGCCACAGAGGTTAAGTGGACAGTGGAGGATTTTAACAACGGTACCCGACTCCTCAATCTGACTTGGGGTACACCACCTTATCCAGTCTCTGTGGGACAGGTGAATtacaacctctctctccatatttgGCCTTGCCAACTAAAGCGAAAGAACCACACCAATATCACTACCACTGAGTTTAGTGTTTATGTGACTTACTCTGCTGTCAGTGGTTACATTTTTGCCTTTAATAAGGTGGGAAAGTCATCGCAGACACATATCCTTGTCCCAGCAAAACATCTTACATATCCCAGgaagtCTTGGCCTGATGACAAACTCATCCCACGCAATTATAACCCTCGCCTTAAAAATTCCTGTCTGGAATGGTACAAGCTAACAGACGGAGAAACACAACCAGCCAAAGTGAATATATCAAAAATGATAAATGGAACAGTGGAGGAAACACTCAAATCTGTCAGACAAAAGATGGACGACTATGTACGTTACTTTTACCTCGTTCACAAACAAACTGATGGAAAGCCACAAACAACAGAAATGCGTCTCATGTACAAAAAAGAGGGTGCAGCTAGTAAGGCACCTGAGGATTTCACTGTTAAAGTAGTAACCAACTCTGCAGTGCTGCATTGGAAACCTATTCCTGTGCAAGACCAGCAAGGCTTCCTTACACACTACGAAGTCTGCTACACAAGAAGCCAAAATAATGGGGCCCACATTGAAATAAAAAAGTGTCACAACATTTCAGCATCAAAAACAGAGTACCTTATTCAAAACCTGACACCTGAGTCCGACTACAATATCTATCTTGCTGGAGCAACAGCTGCAGGCTCAGGACGAAATATATCTATCCATATCTTGACAAAGCCTCAACACAGGTCCATTACTGGCTGGATGATAGCTGGCAGAATTGTTTTAATTGCAATATTAATAACAATATGCTTATTTATCATCAAGAGACATAAAAGCAAGATCTTCCCACCAATACCACGTCCTATGGTCGCAGAGTCCAAGAACTATCGAGCGAGTACTCAGGACATGTATGAGATTAAGGAAGAGGTGCATGAGCTGCAGCTACATGACAAGAGCAGCCAAGATCCCAACCCTGAGGAAGCCACTCTCCTGGAGGTGTGTGAAGACGAGAACGAGAAGAGCCTTGGAGACTCCAGCACACCAGATGGAGTCAGTGACCCACTGACCTCTGATTTTAAGGGCCAGGTGTTAAGTTTAGAAACCGCCGATCCAAGCCAAGGAGAGATTGACTGTGAAGTCACCATGCTGATGTATAGGAACGGTCTGGTCTTTGATATGAAGGCAGACTCCACCGAGGATGTCGGGACGCCACTGTAGACATCACTGCGGTAGCACTTACTTAAAGACTGTAATTAAAATGCATTATGGTGCATTATAAGACTTGTCATAACTTAATCATGCAAGACCCCCTTAACATGGTGTATTGTAGTTTCCTATTGATCCTGAGTAAATAACAGCCATTTTGAGTCAGTTgagaaacatgacataatataagtaagcaataaggcccgaggggatgtggtatatggccaataccatggctaagagctgttcttagGCATAACACAGCACCCTTAGCTAtggtacattggccatataccacaaacccctgaggtgccttattgctattataaactggttactaagataattagaacagtaaacaagtaatTTTGTGTCATGCCCGTggttttcagccaatcagcattcagggcttgaacgaCCAGGTTTATAATAATCCTTACAATAACACATTATAAAaggtccaaatcaaatcaaatcaaatttatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaa

Function

NR:

description
interleukin-6 receptor subunit beta-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021568167.2 True 2778 mRNA 0.43 16 17244353 17256260

Neighbor

gene id symbol gene type direction distance location
LOC110493316 LOC106573897 coding upstream 107988 16982509 ~ 17136370 (+)
LOC110493012 NA coding upstream 263526 16976867 ~ 16980827 (+)
LOC110492876 LOC106613263 coding upstream 278496 16962997 ~ 16967790 (+)
LOC110492686 LOC106573907 coding upstream 308469 16933335 ~ 16935884 (+)
LOC110492606 LOC106573909 coding upstream 323408 16916482 ~ 16920945 (+)
klhl26 LOC106573902 coding downstream 7693 17263953 ~ 17272050 (+)
LOC110494078 LOC106573895 coding downstream 17340 17273600 ~ 17313926 (+)
smim7 LOC106573893 coding downstream 88122 17344382 ~ 17347870 (+)
LOC110494277 LOC106573893 coding downstream 92188 17348448 ~ 17356979 (+)
slc35e1 LOC106573890 coding downstream 110789 17367049 ~ 17384408 (+)
G15891 NA non-coding upstream 3736 17240391 ~ 17240617 (+)
G15743 NA non-coding upstream 270985 16973141 ~ 16973368 (+)
G15717 NA non-coding upstream 274130 16969905 ~ 16970223 (+)
G15708 NA non-coding upstream 287893 16956190 ~ 16956460 (+)
G15865 NA non-coding downstream 1168 17257428 ~ 17257827 (+)
G15928 NA non-coding downstream 58306 17314566 ~ 17314970 (+)
LOC118941201 NA other upstream 663471 16578956 ~ 16592967 (+)
LOC110490510 LOC106573976 other upstream 1528671 15694810 ~ 15716774 (+)
sass6 sass6 other upstream 1776365 15447458 ~ 15468011 (+)
LOC110495874 LOC106573877 other downstream 397947 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 719704 17975918 ~ 17991176 (+)
G17420 NA other downstream 1626463 18882723 ~ 18956208 (+)
G18481 NA other downstream 2308589 19564849 ~ 19565221 (+)
LOC110502506 LOC106573550 other downstream 2312525 19568684 ~ 19575028 (+)

Expression


Co-expression Network