LOC118942066


Basic Information

Item Value
gene id LOC118942066
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 17362899 ~ 17365492 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038000.1
gccaagcgcaACCACTACTATCAGTAACAATGTCAAAGCTGtgcaaaaaagtctgcaaacatcGCCGGTGTTTACAATACCGCTTTACCGGGCATGTACACGTTAAATTACCGCTTATTGTGATtcgcttgtgggcgtgctggcagtATTTTGACCGTGCGTAAAAAATTCAGCATAGTaagtttgtatgaaggtctgATTATTAAATGAGTTAATAGTTCAATAGTAATATCCTCAAACGCTCTGGTGACAAACTTTGCTACCCTGTTTCCTATTGTCGACATGgctgggagaacctattcaaGTGCCTGAGAACTAGGACCGCGCCAAGGGTTAACCTAATGTAtgttgtctcttcgtgtgcagATACCTTGTAAATGGAGATTCCTTCAAAACGATTGCCTACAGTTAACATGTAGAGCACTGcaaggttgggtgaccagggcCACCAGGGACTGCCTCCTGGAAGAATTCAGGTGTGTGAAGTCTACCTGTGTCCTGCataacttcatgaggatggacacgAGGACCAGGAGGGGATCTGCAGCTCGCCGCCATGTGCCAGAGGGGAAGTCTGCTGCTCTGCAGTATGTTTCAAGGATGGGGTCCAACAACGCAGCAAGAGAGGCAATCTGTGTGCGGGAGATCTTCACTTCCTACTTCTACTAAGAGGGTGCTGTTCCCTGACAATGCCtagactacactatgcacaaccaaaggCTATTTTAACAGCCATTCACATTGCAATAAGAGTATTCTTCCATTTACTTAGCtatgtcaactgcagttattCAATTCCCACTTTCTCTCCCTTTGATTTCAACTTCTCAGGTGAGGGTGCTGTTTAGGTAAGTGTGTGATGcctgtacaaaaacaaaacaggctaGTTTAAATCAACCATATTGAAAAAATGTAGAACAATTAGACACCCTATAGCCCAAACGCATGTATCAATCTGATTGATGTGTTGTGCAGTAAGCAGGCTCAGGTGTGTAACtggctccttccaccttcaaaAAATAGGCAAGGCCAACcatgtgtaacagatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgcaagggccgcggcttttgtggagcgatgggtaacgacgcttcgtagg

Function

NR:

description
uncharacterized protein LOC100191015

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038000.1 True 1157 mRNA 0.46 3 17362899 17365492

Neighbor

gene id symbol gene type direction distance location
LOC110494221 LOC100194656 coding downstream 19349 17329927 ~ 17343550 (-)
comp LOC106573894 coding downstream 36140 17314484 ~ 17326759 (-)
LOC110493215 LOC106573896 coding downstream 141942 17173402 ~ 17220957 (-)
LOC110493506 LOC106573900 coding downstream 189692 17140522 ~ 17173207 (-)
LOC110493631 LOC106573903 coding downstream 222507 17137016 ~ 17140392 (-)
LOC110531963 LOC106573889 coding upstream 25404 17390896 ~ 17392469 (-)
LOC118942412 NA coding upstream 62785 17428277 ~ 17436513 (-)
LOC110495007 NA coding upstream 151175 17516667 ~ 17518593 (-)
LOC110531970 LOC106573879 coding upstream 236220 17601712 ~ 17619924 (-)
LOC110495805 LOC106573878 coding upstream 271917 17637409 ~ 17644659 (-)
G16220 NA non-coding downstream 350 17362332 ~ 17362549 (-)
G16218 NA non-coding downstream 2126 17360516 ~ 17360773 (-)
G16216 LOC106573893 non-coding downstream 5921 17354402 ~ 17356978 (-)
G16209 LOC106573893 non-coding downstream 15030 17344408 ~ 17347869 (-)
G16208 NA non-coding downstream 18522 17344111 ~ 17344377 (-)
G16228 NA non-coding upstream 12263 17377755 ~ 17378361 (-)
G16271 NA non-coding upstream 82418 17447910 ~ 17448363 (-)
G16272 NA non-coding upstream 83551 17449043 ~ 17449261 (-)
G16274 NA non-coding upstream 86256 17451748 ~ 17452224 (-)
G16275 NA non-coding upstream 86981 17452473 ~ 17452740 (-)
G16161 LOC106573901 other downstream 105658 17255236 ~ 17257241 (-)
G16100 LOC106573897 other downstream 226542 17131420 ~ 17136357 (-)
LOC110492105 homer3 other downstream 490971 16838135 ~ 16871992 (-)
G15470 NA other downstream 831423 16531047 ~ 16531476 (-)
LOC110531395 LOC106613616 other downstream 1146603 16181514 ~ 16295527 (-)
LOC110497564 LOC106573866 other upstream 724388 18089520 ~ 18098678 (-)
LOC110497762 LOC106573859 other upstream 1024631 18390123 ~ 18450517 (-)
mydgf LOC106573827 other upstream 1511385 18876547 ~ 18888907 (-)
LOC110502937 ccl25 other upstream 2265001 19630376 ~ 19633058 (-)
G20266 NA other upstream 3433628 20799120 ~ 20800008 (-)

Expression


Co-expression Network