Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118942412 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 17428277 ~ 17436513 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005038398.1 | True | 101 | mRNA | 0.43 | 3 | 17428277 | 17436513 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531963 | LOC106573889 | coding | downstream | 35808 | 17390896 ~ 17392469 (-) |
| LOC118942066 | NA | coding | downstream | 62785 | 17362899 ~ 17365492 (-) |
| LOC110494221 | LOC100194656 | coding | downstream | 84727 | 17329927 ~ 17343550 (-) |
| comp | LOC106573894 | coding | downstream | 101518 | 17314484 ~ 17326759 (-) |
| LOC110493215 | LOC106573896 | coding | downstream | 207320 | 17173402 ~ 17220957 (-) |
| LOC110495007 | NA | coding | upstream | 80154 | 17516667 ~ 17518593 (-) |
| LOC110531970 | LOC106573879 | coding | upstream | 165199 | 17601712 ~ 17619924 (-) |
| LOC110495805 | LOC106573878 | coding | upstream | 200896 | 17637409 ~ 17644659 (-) |
| jak3 | jak3 | coding | upstream | 436083 | 17872596 ~ 17911527 (-) |
| LOC110497425 | LOC106573868 | coding | upstream | 573991 | 18008683 ~ 18058602 (-) |
| G16228 | NA | non-coding | downstream | 49916 | 17377755 ~ 17378361 (-) |
| G16220 | NA | non-coding | downstream | 65728 | 17362332 ~ 17362549 (-) |
| G16218 | NA | non-coding | downstream | 67504 | 17360516 ~ 17360773 (-) |
| G16216 | LOC106573893 | non-coding | downstream | 71299 | 17354402 ~ 17356978 (-) |
| G16209 | LOC106573893 | non-coding | downstream | 80408 | 17344408 ~ 17347869 (-) |
| G16271 | NA | non-coding | upstream | 11397 | 17447910 ~ 17448363 (-) |
| G16272 | NA | non-coding | upstream | 12530 | 17449043 ~ 17449261 (-) |
| G16274 | NA | non-coding | upstream | 15235 | 17451748 ~ 17452224 (-) |
| G16275 | NA | non-coding | upstream | 15960 | 17452473 ~ 17452740 (-) |
| G16277 | NA | non-coding | upstream | 16630 | 17453143 ~ 17453557 (-) |
| G16161 | LOC106573901 | other | downstream | 171036 | 17255236 ~ 17257241 (-) |
| G16100 | LOC106573897 | other | downstream | 291920 | 17131420 ~ 17136357 (-) |
| LOC110492105 | homer3 | other | downstream | 556349 | 16838135 ~ 16871992 (-) |
| G15470 | NA | other | downstream | 896801 | 16531047 ~ 16531476 (-) |
| LOC110531395 | LOC106613616 | other | downstream | 1211981 | 16181514 ~ 16295527 (-) |
| LOC110497564 | LOC106573866 | other | upstream | 653367 | 18089520 ~ 18098678 (-) |
| LOC110497762 | LOC106573859 | other | upstream | 953610 | 18390123 ~ 18450517 (-) |
| mydgf | LOC106573827 | other | upstream | 1440364 | 18876547 ~ 18888907 (-) |
| LOC110502937 | ccl25 | other | upstream | 2193980 | 19630376 ~ 19633058 (-) |
| G20266 | NA | other | upstream | 3362607 | 20799120 ~ 20800008 (-) |
