pex11g (pex11g)


Basic Information

Item Value
gene id pex11g
gene name pex11g
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 17436789 ~ 17439767 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021569921.2
ATATATCATTGAACACTTCCTGTTCAAAGTACAACACCAATTTTTCTGTGTCACAGATTGTAGAGGAAACCTGTTTTTGGTACTATTTCACACAATTTCGTGTGGATCTTCGAGCTGAAAAAGATGACATCTGTCACGTGCATTTACAGATCTTTGTTACTTTGACGCACAGTCATTGCTTTGACGTTGCAGTCAACACCGGCAggatcaatttgatttccattcgAGTGAACAGAGCTGTGTACACCTGACTTGCAGACCGCTACTAGTGTGTTTACATAATGCAAAATTCATTGGAGTCGCTTGTGAATGTGCTTGAGTCGTACAGAGGAAGAGATAAAGTGATAAGGACACTGTGCTATGGGTCCCAGCTGGTTGGTGGGGTTCTGTCTGAGAAGCCAGGGCTGTCATCCGCACAGCTTGGAAAGAGCCTCCTACTGTTCTCTGCACAGCTAAGCCACTGTCGGACTGTACTTCGACTCTTCGATGACCTCTCCATGCTCACATATTCACAAAGCTATGGTCTTGGAGCCGGGGAAGAAGATTCTGCACTGCGCTGGATGTCTGTGCTGAATAATGTGGCTGACCAGTTGTATTACCCTTGTGAACATATAGCGTGGGCTGCCGATGCCAAGATCATCAGTGCTAAGTCTGACAAATGGTGGCTACTAAGCGGTATACTCTGGGGAGTATCTCTGCTTTTAGGCGTTTTCAGGTCTATGAGGGTTGTCATGCTGCTGCGGAAGAAGTTAAGGAAGTCAACACGAGGCAACAGTAGTGAGGGAACTGTTGCCAGCAGGTCTCAGCTCCGGAGGCAGGTGCAAGGGGAGGTCCTCAGTATTCTCAGCAGCATGGCAGATCTGAGTAATGCCATTCATTGGATGCCCCCTGGTTTCCTCTGGGCAGGATGCTTTCCCAATTGGCTAGTTGGACTTATGGGCACCACGTCATCCCTGATTGGCTTGATCCAGATGGGTGCCAGTCAAGCAGTCACTGCCTAGTCTAATTGCTTTGACaaatcttttcttttttttgacTAGCACATTTGATAACCCAATCAGCATTTGTTGAAAAATCTACTGAAATTTGGGGAACATTCAACATCAAACCCTGTTCTGGATGACATCGTTGTGCCCAGTGTTGGTAATTAATGGTTTGTTTCTCTTTTCTTGACAAAGCTCCACAACCAGATGCAACAGTTGACTATTGTCTGTTTTTAAACCAACTGTTCAGTGGTGTTGAACATAGCCCAGACATATTTTAAGTTGACTTGTTACTAGTAGGAATACAGTAAAGCATGGGAAGCTCTGTCCGCCTGTGCTTGAGTTGAGTCATGTTCAGCTGGCCTACTGTTTCTCCTAGCTAGGCACTCCAATTATCTGTTATGACTCTCAGTATTTCTCACATAAACCCATGGAATGTGAAGTGAAAAAATATAGAATATCTATTACATTTTAATTAAATGAATGAACCTTTTtaacctatttttttttttttttagaattcTGAATGTTAGATATGAACAATATTGCTGTAACATTAATTGTTTGGCATTTTGGCACCaatcattttttttgtaaaattATAATCCTAACTTTATCTCAGAGTAGCAATTGCCCTTTCAGTATGGTTTTATGAACATTAGCAATCAAACAACGTCAACACAACATTTGTGGCTACTATTTCAACCACAAACAGGCTTGACAATGAAAATATCAGCTGCTGTGAACAGTGATGAATTGTAATTTTTGTTCATAATTTTCCTAGAATAAAATAGACAGTTAAATTACATAAT

Function

symbol description
pex11g Predicted to be involved in peroxisome fission. Predicted to be located in membrane and peroxisome. Predicted to be integral component of peroxisomal membrane. Predicted to be active in peroxisomal membrane. Orthologous to human PEX11G (peroxisomal biogenesis factor 11 gamma).

NR:

description
peroxisomal membrane protein 11C

GO:

id name namespace
GO:0016559 peroxisome fission biological_process
GO:0005779 integral component of peroxisomal membrane cellular_component

KEGG:

id description
K13353 PEX11C; peroxin-11C

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021569921.2 True 1795 mRNA 0.41 5 17436789 17439767

Neighbor

gene id symbol gene type direction distance location
LOC110494533 LOC106573888 coding upstream 340 17420396 ~ 17436449 (+)
slc35e1 LOC106573890 coding upstream 52381 17367049 ~ 17384408 (+)
LOC110494277 LOC106573893 coding upstream 79810 17348448 ~ 17356979 (+)
smim7 LOC106573893 coding upstream 88919 17344382 ~ 17347870 (+)
LOC110494078 LOC106573895 coding upstream 122863 17273600 ~ 17313926 (+)
si:ch73-40i7.5 apba1 coding downstream 2563 17442330 ~ 17456277 (+)
zgc:172302 LOC106573884 coding downstream 27891 17467658 ~ 17516649 (+)
r3hdm4 r3hdm4 coding downstream 78817 17518584 ~ 17525429 (+)
LOC110495217 LOC106573880 coding downstream 87036 17526803 ~ 17591008 (+)
ctdspl3 LOC106573883 coding downstream 151507 17591274 ~ 17596381 (+)
G15946 NA non-coding upstream 71166 17365338 ~ 17365623 (+)
G15944 NA non-coding upstream 74361 17362211 ~ 17362428 (+)
G15943 LOC106581475 non-coding upstream 75379 17361082 ~ 17361410 (+)
G15942 NA non-coding upstream 76683 17359169 ~ 17360106 (+)
G15909 NA non-coding upstream 78736 17357701 ~ 17358053 (+)
G16259 NA non-coding downstream 1410 17441177 ~ 17441511 (+)
G16281 NA non-coding downstream 26415 17466182 ~ 17466653 (+)
G16294 NA non-coding downstream 44511 17484278 ~ 17504919 (+)
G16365 NA non-coding downstream 172497 17612264 ~ 17612604 (+)
G16368 NA non-coding downstream 176570 17616337 ~ 17616569 (+)
LOC110492876 LOC106613263 other upstream 468999 16962997 ~ 16967790 (+)
LOC110492606 LOC106573909 other upstream 516380 16916482 ~ 16920945 (+)
LOC118941201 NA other upstream 855907 16578956 ~ 16592967 (+)
LOC110490510 LOC106573976 other upstream 1721107 15694810 ~ 15716774 (+)
sass6 sass6 other upstream 1968801 15447458 ~ 15468011 (+)
LOC110495874 LOC106573877 other downstream 214440 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 536197 17975918 ~ 17991176 (+)
G17420 NA other downstream 1442956 18882723 ~ 18956208 (+)
G18481 NA other downstream 2125082 19564849 ~ 19565221 (+)
LOC110502506 LOC106573550 other downstream 2129018 19568684 ~ 19575028 (+)

Expression


Co-expression Network