Gene
RNA
| Item | Value |
|---|---|
| gene id | kcnn1b |
| gene name | kcnn1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 17993047 ~ 18002431 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| kcnn1 | Enables inward rectifier potassium channel activity and small conductance calcium-activated potassium channel activity. Involved in potassium ion transmembrane transport. Predicted to be located in cytoplasm. Predicted to be part of voltage-gated potassium channel complex. Predicted to be active in neuron projection; neuronal cell body; and plasma membrane. |
| description |
|---|
| small conductance calcium-activated potassium channel protein 2-like isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0006813 | potassium ion transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005516 | calmodulin binding | molecular_function |
| GO:0016286 | small conductance calcium-activated potassium channel activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005038787.1 | False | 6241 | mRNA | 0.44 | 7 | 17993047 | 18001455 |
| XM_021573172.2 | False | 5055 | mRNA | 0.46 | 9 | 17993055 | 18002431 |
| XM_021573328.2 | True | 2020 | mRNA | 0.48 | 7 | 17997092 | 18002431 |
17,984,000
17,986,000
17,988,000
17,990,000
17,992,000
17,994,000
17,996,000
17,998,000
18,000,000
18,002,000
18,004,000
18,006,000
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccdc124 | cc124 | coding | upstream | 4618 | 17975918 ~ 17991176 (+) |
| slc5a5 | slc5a5 | coding | upstream | 49548 | 17914509 ~ 17943499 (+) |
| LOC110496754 | b3gnt3 | coding | upstream | 132889 | 17856865 ~ 17860158 (+) |
| LOC118966550 | NA | coding | upstream | 137029 | 17842536 ~ 17856018 (+) |
| LOC118942967 | LOC106573872 | coding | upstream | 156108 | 17834974 ~ 17836939 (+) |
| LOC118943582 | NA | coding | downstream | 73546 | 18075977 ~ 18096407 (+) |
| LOC110497621 | LOC106573864 | coding | downstream | 104391 | 18106822 ~ 18108826 (+) |
| LOC110497920 | LOC106573861 | coding | downstream | 380937 | 18383368 ~ 18391532 (+) |
| LOC110498361 | LOC106573862 | coding | downstream | 460576 | 18463007 ~ 18471679 (+) |
| LOC110498532 | LOC106573857 | coding | downstream | 476668 | 18479099 ~ 18494177 (+) |
| G16809 | NA | non-coding | upstream | 18128 | 17974130 ~ 17974919 (+) |
| G16825 | NA | non-coding | upstream | 34425 | 17958398 ~ 17958622 (+) |
| G16510 | LOC100194703 | non-coding | upstream | 62463 | 17930238 ~ 17930584 (+) |
| G16505 | NA | non-coding | upstream | 67607 | 17924985 ~ 17925440 (+) |
| G16810 | NA | non-coding | downstream | 2847 | 18005278 ~ 18007518 (+) |
| G16811 | NA | non-coding | downstream | 6549 | 18008980 ~ 18011312 (+) |
| G16933 | NA | non-coding | downstream | 67007 | 18069438 ~ 18069653 (+) |
| G16946 | LOC106573866 | non-coding | downstream | 92234 | 18094665 ~ 18095197 (+) |
| G16962 | NA | non-coding | downstream | 118925 | 18121356 ~ 18121672 (+) |
| LOC110495874 | LOC106573877 | other | upstream | 328039 | 17654164 ~ 17673094 (+) |
| LOC110492876 | LOC106613263 | other | upstream | 1025257 | 16962997 ~ 16967790 (+) |
| LOC110492606 | LOC106573909 | other | upstream | 1072638 | 16916482 ~ 16920945 (+) |
| LOC118941201 | NA | other | upstream | 1412165 | 16578956 ~ 16592967 (+) |
| G17420 | NA | other | downstream | 880292 | 18882723 ~ 18956208 (+) |
| G18481 | NA | other | downstream | 1562418 | 19564849 ~ 19565221 (+) |
| LOC110502506 | LOC106573550 | other | downstream | 1566354 | 19568684 ~ 19575028 (+) |
| LOC110503939 | LOC106573564 | other | downstream | 1861360 | 19863734 ~ 19865619 (+) |
| G19083 | NA | other | downstream | 1913155 | 19915586 ~ 19915832 (+) |
