LOC118944537


Basic Information

Item Value
gene id LOC118944537
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 18215104 ~ 18217710 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039941.1
GTACAATGCATCATGGTACAATACATCATGGCACTGTGCCTCATTAGAATCAGCTGATATTCTGAGGAACTGGGCCTCTTTTGACACCCAATGGCTATCTAGTTTCAGTTGACAGCATCCTCGCTGGCCAAGGAGAGATCAGGGACTTCATCCAGACCAAACGTCTCTTTATAAAGTCTCTCTGTGGAGTCCTCATCTCCAGTCCTCCTATCATTGGTATTCTGTGGGAGAGCTGCTCGACCGCTGGGAGGATATGGTGGGCTGTGTACGATACGCTGTGCATTCACTGCTGATGAGTTGATGATGGTCACAGAGTTAAACAGAGTATGAAAACACCATCTCCCCTGGACGGACGTGACGGCCATCTTAACTTGTCCAGCACAGCACAGGTAGTAGAGTCAATGGGGAAATTTCTGGAGACCTACTGTCGCCCTTCTCTCAGTCCCACACTGACAGTATGATCCCATGTTTCCTAGTGGTCATTAGTTGTAGGGCCAGAGGCGTAAACCGACATAGTACATAAAGTATTAACCAAACAGCATTTGTCATTATAACTTGTTGTTTTATGCCTATgaagtctctgtgtgtgagtgaggaaaGAATACTAACAGGATAAGGTTGATTTATAAGATACATGGTTGTGTTCCCTAAAAGCAGCATTTCCATCATCATCACTCCTCATCTTCACTGGGGCTCTGAATAGACCAGCCACAGATGTGTTGAGCTTGTGATTAACGGCACAATGGGCTGTTtgttgctgcctctctctctccacctgggcCTCTGTAGATGGAATCATCCCTGGCAGCACTCATGACCAGCTTGAATCAGCCCTTCTGTTTGGGTCTGTTAATGATGTTGTCATTTCTATAGTACCTTCTGTCTTTATCCACTCTGATCTACCTGGCTTGGCTTGGCTTTAGCTAATGATCCATTTGAACAGCTGGACGTGTTAGTAAGGATGTTAGTGCCTTGCCTTGCTTAAGGGTACGCAGACCAACGAGCCAATGTGGCCCttcatgatcaaatcaaatcaaattgtatttatcacatgcgccgaatacaacaggtttcaccttacagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039941.1 True 1085 mRNA 0.46 3 18215104 18217710

Neighbor

gene id symbol gene type direction distance location
LOC110497564 LOC106573866 coding downstream 116426 18089520 ~ 18098678 (-)
LOC110497425 LOC106573868 coding downstream 156502 18008683 ~ 18058602 (-)
jak3 jak3 coding downstream 303577 17872596 ~ 17911527 (-)
LOC110495805 LOC106573878 coding downstream 570445 17637409 ~ 17644659 (-)
LOC110531970 LOC106573879 coding downstream 595180 17601712 ~ 17619924 (-)
xxylt1 LOC106573863 coding upstream 92978 18310688 ~ 18383077 (-)
LOC110497762 LOC106573859 coding upstream 173411 18390123 ~ 18450517 (-)
LOC110498635 LOC100380752 coding upstream 294826 18512536 ~ 18516021 (-)
LOC110498717 LOC100380752 coding upstream 344729 18562439 ~ 18678439 (-)
LOC118943879 NA coding upstream 472551 18690261 ~ 18692032 (-)
G17068 NA non-coding downstream 33916 18180971 ~ 18181188 (-)
G17067 NA non-coding downstream 34854 18180042 ~ 18180250 (-)
G17063 NA non-coding downstream 37277 18177611 ~ 18177827 (-)
G17056 NA non-coding downstream 40326 18173667 ~ 18174778 (-)
G17032 NA non-coding downstream 53468 18161407 ~ 18161636 (-)
G17773 LOC106573861 non-coding upstream 166601 18384311 ~ 18387905 (-)
G17865 LOC100136725 non-coding upstream 251072 18468782 ~ 18469768 (-)
G17837 NA non-coding upstream 270505 18488215 ~ 18488559 (-)
G16161 LOC106573901 other downstream 957863 17255236 ~ 17257241 (-)
G16100 LOC106573897 other downstream 1078747 17131420 ~ 17136357 (-)
LOC110492105 homer3 other downstream 1343176 16838135 ~ 16871992 (-)
G15470 NA other downstream 1683628 16531047 ~ 16531476 (-)
mydgf LOC106573827 other upstream 659167 18876547 ~ 18888907 (-)
LOC110502937 ccl25 other upstream 1412783 19630376 ~ 19633058 (-)
G20266 NA other upstream 2581410 20799120 ~ 20800008 (-)
LOC118945319 NA other upstream 2867588 21085298 ~ 21089250 (-)

Expression


Co-expression Network