mydgf (LOC106573827)


Basic Information

Item Value
gene id mydgf
gene name LOC106573827
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 18876547 ~ 18888907 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961087.1
GCACTCGCATGAGTTATCGTTACATTGGCTAGTGCCGATGAACAAACGAAAACTGTGGAATTCAACGTAAAACCCGGCGGAATGGTGCACACGTTCTCTGAGAAAATGAGAGAATATGAATGTTCATTCACGTATGCATCACAAGGGGGAACCAACGAGCAATGGCTGATGAGTGTGGGCCTGAGCGACGACGACAGTCTGTTCTCCTGCTCTTTGTGGAGACCCCAAGGGAAGTCCTACCTGTTTTTCACACAGTTCAAGGCTGAGCTGAAAGGAGCTAAGATTGAGTATGCCAGTGCATATTCCCAGACTGTGGCGGGAGGACAGAGGGATGTGACTTTGAAGGAAGATGAATTCACTGTGGGGGATTCTACAGTGACCCACAAAGATGGGAAGTTCCGCGCTGAGCTCTCCAAACTGACTATTATTGGCCGGACACAACGCGATGAGCTTTGATTGGCTGGAAATCCGAATGACTGTTGTAATATCATCAAATGGTGACATCCAGGCGTGCTCTCAAGGCAGGCCATTGTGCTCTAATGTCGACAACAGTGGCAATTGAAGGACGATATTCAAGCACGAAGGACGATACAGTAATGAGTGACAGCCTTAGACCTTGGTGGTCTACAAATATGCTGTTgaataaatgtattgttttttatttGGAGTATTATGGCTTTACATGGAAAATTCATTATGTTCCATACTGTATGAGAATGCATATTGGGATGTCTGATCTTAACGGGTGTAGAGAGATATAGGTTCAGAGGATTTATTGGTCTTATGCTAAGCCAGGGAAATGTGAGTAATCATTTGTCTTCATCGTGCGCACGTTAAGATATATACATTTTTCCAATCTGCTTCTCTAAGCAAGTGAATGGTTAGTACAGATAATGTAGAGCATGGAGCCCCAGTTTCTATGTTCTTTTGATCTAGATAGAGCACCTGATTCAACCAACCAATCATCATTCAATGCAGTTGATTTAgtttttctccctcctctctcactcctaccAACAGTCTTAATGAAGCTAGGTGGAGCTTTAGAACAGATGCTTATTTGGCCTACCAGGATTAGAGACATATTGCCTTGATGTAGAGGATAGTTAGCTTGCCAGCACATACCAGGTTCATCCCTGTCTGTCTAGAGGAGGCCCTCACTCAGCGTTGATAGTGGAGTCCCTTGGCTCCCAAAAGGAAATACCACCGGGCACttgttttgttttatattttattttctaCTTCTTGGATTTCTAAATCACAATGTGCAACTGATGCTCCAATAAAAGTCATATTGTCTGGGAATGTGAAATGTGTGTTCTCATTTGTTTTGACACAGCTAATTGATCAGAATGTCCTTGCTAAGATGTCACACTGCTGTCCATGCTCAGGTTTGATGCTTTTCAGCTTGGATTACTTTCAGAGTTCTGTGTGCTGATCTCATGCTCTTTTTTTTATATTATTAGGACACACATTTTcagtccagcagattccaacaTTATTACGTTTCATATGAAAATGTAGCTATAACACAGACGAAATTCGATGTGCATAATGTTTTTGGAccgtttgcaaacaatgtaaaaaaaaagaatgatAAAATcgttgagttaataaagccgaatacaaacatgg
>XM_021576789.2
GAATTCCCTCATCACAGTTCCCTGTGACGACACTCGGCAGAGCACTCGCATGAGTTATCGGTAAGTAGCAGCAGACCAAAATGGCACAAAATAACTTTGCATTTCTTGCTTTGTTGGTTGTAACGTCAACAGTTACATTGGCTAGTGCCGATGAACAAACGAAAACTGTGGAATTCAACGTAAAACCCGGCGGAATGGTGCACACGTTCTCTGAGAAAATGAGAGAATATGAATGTTCATTCACGTATGCATCACAAGGGGGAACCAACGAGCAATGGCTGATGAGTGTGGGCCTGAGCGACGACGACAGTCTGTTCTCCTGCTCTTTGTGGAGACCCCAAGGGAAGTCCTACCTGTTTTTCACACAGTTCAAGGCTGAGCTGAAAGGAGCTAAGATTGAGTATGCCAGTGCATATTCCCAGACTGTGGCGGGAGGACAGAGGGATGTGACTTTGAAGGAAGATGAATTCACTGTGGGGGATTCTACAGTGACCCACAAAGATGGGAAGTTCCGCGCTGAGCTCTCCAAACTGACTATTATTGGCCGGACACAACGCGATGAGCTTTGATTGGCTGGAAATCCGAATGACTGTTGTAATATCATCAAATGGTGACATCCAGGCGTGCTCTCAAGGCAGGCCATTGTGCTCTAATGTCGACAACAGTGGCAATTGAAGGACGATATTCAAGCACGAAGGACGATACAGTAATGAGTGACAGCCTTAGACCTTGGTGGTCTACAAATATGCTGTTgaataaatgtattgttttttatttGGAGTATTATGGCTTTACATGGAAAATTCATTATGTTCCATACTGTATGAGAATGCATATTGGGATGTCTGATCTTAACGGGTGTAGAGAGATATAGGTTCAGAGGATTTATTGGTCTTATGCTAAGCCAGGGAAATGTGAGTAATCATTTGTCTTCATCGTGCGCACGTTAAGATATATACATTTTTCCAATCTGCTTCTCTAAGCAAGTGAATGGTTAGTACAGATAATGTAGAGCATGGAGCCCCAGTTTCTATGTTCTTTTGATCTAGATAGAGCACCTGATTCAACCAACCAATCATCATTCAATGCAGTTGATTTAgtttttctccctcctctctcactcctaccAACAGTCTTAATGAAGCTAGGTGGAGCTTTAGAACAGATGCTTATTTGGCCTACCAGGATTAGAGACATATTGCCTTGATGTAGAGGATAGTTAGCTTGCCAGCACATACCAGGTTCATCCCTGTCTGTCTAGAGGAGGCCCTCACTCAGCGTTGATAGTGGAGTCCCTTGGCTCCCAAAAGGAAATACCACCGGGCACttgttttgttttatattttattttctaCTTCTTGGATTTCTAAATCACAATGTGCAACTGATGCTCCAATAAAAGTCATATTGTCTGGGAATGTGAAATGTGTGTTCTCATTTGTTTTGACACAGCTAATTGATCAGAATGTCCTTGCTAAGATGTCACACTGCTGTCCATGCTCAGGTTTGATGCTTTTCAGCTTGGATTACTTTCAGAGTTCTGTGTGCTGATCTCATGCTCTTTTTTTTATATTATTAGGACACACATTTTcagtccagcagattccaacaTTATTACGTTTCATATGAAAATGTAGCTATAACACAGACGAAATTCGATGTGCATAATGTTTTTGGAccgtttgcaaacaatgtaaaaaaaaagaatgatAAAATcgttgagttaataaagccgaatacaaacatgg
>XM_036961058.1
GCCCCTCTGAATAACAGGGTGTGGTTTTGACTTAACTGCATTGGGAAAAAGAAAGACGCGGAATGGAGAGTGAACATTTAATTAGCacagacatggaacaggacaggaacagcgtcagaacaggtgattgagtccagCATACAAATGAGCGTCTGCCAAGAAGTCTCCCATCTGTCTAATACGCTCAATGAAGAGGGCCATAGAGTCAGTTACATTGGCTAGTGCCGATGAACAAACGAAAACTGTGGAATTCAACGTAAAACCCGGCGGAATGGTGCACACGTTCTCTGAGAAAATGAGAGAATATGAATGTTCATTCACGTATGCATCACAAGGGGGAACCAACGAGCAATGGCTGATGAGTGTGGGCCTGAGCGACGACGACAGTCTGTTCTCCTGCTCTTTGTGGAGACCCCAAGGGAAGTCCTACCTGTTTTTCACACAGTTCAAGGCTGAGCTGAAAGGAGCTAAGATTGAGTATGCCAGTGCATATTCCCAGACTGTGGCGGGAGGACAGAGGGATGTGACTTTGAAGGAAGATGAATTCACTGTGGGGGATTCTACAGTGACCCACAAAGATGGGAAGTTCCGCGCTGAGCTCTCCAAACTGACTATTATTGGCCGGACACAACGCGATGAGCTTTGATTGGCTGGAAATCCGAATGACTGTTGTAATATCATCAAATGGTGACATCCAGGCGTGCTCTCAAGGCAGGCCATTGTGCTCTAATGTCGACAACAGTGGCAATTGAAGGACGATATTCAAGCACGAAGGACGATACAGTAATGAGTGACAGCCTTAGACCTTGGTGGTCTACAAATATGCTGTTgaataaatgtattgttttttatttGGAGTATTATGGCTTTACATGGAAAATTCATTATGTTCCATACTGTATGAGAATGCATATTGGGATGTCTGATCTTAACGGGTGTAGAGAGATATAGGTTCAGAGGATTTATTGGTCTTATGCTAAGCCAGGGAAATGTGAGTAATCATTTGTCTTCATCGTGCGCACGTTAAGATATATACATTTTTCCAATCTGCTTCTCTAAGCAAGTGAATGGTTAGTACAGATAATGTAGAGCATGGAGCCCCAGTTTCTATGTTCTTTTGATCTAGATAGAGCACCTGATTCAACCAACCAATCATCATTCAATGCAGTTGATTTAgtttttctccctcctctctcactcctaccAACAGTCTTAATGAAGCTAGGTGGAGCTTTAGAACAGATGCTTATTTGGCCTACCAGGATTAGAGACATATTGCCTTGATGTAGAGGATAGTTAGCTTGCCAGCACATACCAGGTTCATCCCTGTCTGTCTAGAGGAGGCCCTCACTCAGCGTTGATAGTGGAGTCCCTTGGCTCCCAAAAGGAAATACCACCGGGCACttgttttgttttatattttattttctaCTTCTTGGATTTCTAAATCACAATGTGCAACTGATGCTCCAATAAAAGTCATATTGTCTGGGAATGTGAAATGTGTGTTCTCATTTGTTTTGACACAGCTAATTGATCAGAATGTCCTTGCTAAGATGTCACACTGCTGTCCATGCTCAGGTTTGATGCTTTTCAGCTTGGATTACTTTCAGAGTTCTGTGTGCTGATCTCATGCTCTTTTTTTTATATTATTAGGACACACATTTTcagtccagcagattccaacaTTATTACGTTTCATATGAAAATGTAGCTATAACACAGACGAAATTCGATGTGCATAATGTTTTTGGAccgtttgcaaacaatgtaaaaaaaaagaatgatAAAATcgttgagttaataaagccgaatacaaacatgg
>TU21090
CGACACTCGGCAGAGCACTCGCATGAGTTATCGAGAGAATATGAATGTTCATTCACGTATGCATCACAAGGGGGAACCAACGAGCAATGGCTGATGAGTGTGGGCCTGAGCGACGACGACAGTCTGTTCTCCTGCTCTTTGTGGAGACCCCAAGGGAAGTCCTACCTGTTTTTCACACAGTTCAAGGCTGAGCTGAAAGGAGCTAAGATTGAGTATGCCAGTGCATATTCCCAGACTGTGGCGGGAGGACAGAGGGATGTGACTTTGAAGGAAGATGAATTCACTGTGGGGGATTCTACAGTGACCCACAAAGATGGGAAGTTCCGCGCTGAGCTCTCCAAACTGACTATTATTGGCCGGACACAACGCGATGAGCTTTGATTGGCTGGAAATCCGAATGACTGTTGTAATATCATCAAATGGTGACATCCAGGCGTGCTCTCAAGGCAGGCCATTGTGCTCTAATGTCGACAACAGTGGCAATTGAAGGACGATATTCAAGCACGAAGGACGATACAGTAATGAGTGACAGCCTTAGACCTTGGTGGTCTACAAATATGCTGTTgaataaatgtattgttttttatttGGAGTATTATGGCTTTACATGGAAAATTCATTATGTTCCATACTGTATGAGAATGCATATTGGGATGTCTGATCTTAACGGGTGTAGAGAGATATAGGTTCAGAGGATTTATTGGTCTTATGCTAAGCCAGGGAAATGTGAGTAATCATTTGTCTTCATCGTGCGCACGTTAAGATATATACATTTTTCCAATCTGCTTCTCTAAGCAAGTGAATGGTTAGTACAGATAATGTAGAGCATGGAGCCCCAGTTTCTATGTTCTTTTGATCTAGATAGAGCACCTGATTCAACCAACCAATCATCATTCAATGCAGTTGATTTAgtttttctccctcctctctcactcctaccAACAGTCTTAATGAAGCTAGGTGGAGCTTTAGAACAGATGCTTATTTGGCCTACCAGGATTAGAGACATATTGCCTTGATGTAGAGGATAGTTAGCTTGCCAGCACATACCAGGTTCATCCCTGTCTGTCTAGAGGAGGCCCTCACTCAGCGTTGATAGTGGAGTCCCTTGGCTCCCAAAAGGAAATACCACCGGGCACttgttttgttttatattttattttctaCTTCTTGGATTTCTAAATCACAATGTGCAACTGATGCTCCAATAAAAGTCATATTGTCTGGGAA

Function

NR:

description
myeloid-derived growth factor-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961087.1 False 1635 mRNA 0.42 7 18876547 18885638
XM_021576789.2 False 1748 mRNA 0.42 6 18876547 18885679
XM_036961058.1 False 1825 mRNA 0.42 8 18876547 18888907
TU21090 True 1230 TUCP 0.36 6 18876877 18885652

Neighbor

gene id symbol gene type direction distance location
LOC110531991 LOC106573830 coding downstream 35058 18834162 ~ 18841489 (-)
LOC110499356 LOC106573829 coding downstream 50831 18768284 ~ 18825716 (-)
LOC118943879 NA coding downstream 184515 18690261 ~ 18692032 (-)
LOC110498717 LOC100380752 coding downstream 198108 18562439 ~ 18678439 (-)
LOC110498635 LOC100380752 coding downstream 360526 18512536 ~ 18516021 (-)
LOC110499862 LOC106573825 coding upstream 1913 18890820 ~ 18895770 (-)
LOC110499955 LOC106573823 coding upstream 16308 18905215 ~ 18921146 (-)
c1h19orf44 crt coding upstream 175838 19064745 ~ 19071856 (-)
LOC110501271 klf2 coding upstream 239676 19128583 ~ 19131233 (-)
LOC110501398 ap1m1 coding upstream 420798 19309705 ~ 19334685 (-)
G18033 NA non-coding downstream 37867 18822652 ~ 18838680 (-)
G18042 NA non-coding downstream 41015 18834672 ~ 18835532 (-)
G18039 NA non-coding downstream 46186 18828988 ~ 18830361 (-)
G17999 NA non-coding downstream 109836 18766059 ~ 18766711 (-)
G17906 NA non-coding downstream 319451 18556047 ~ 18557096 (-)
G18121 NA non-coding upstream 78470 18967377 ~ 18967832 (-)
G18123 NA non-coding upstream 82581 18971488 ~ 18974076 (-)
G18130 NA non-coding upstream 94508 18983415 ~ 18983825 (-)
G18136 NA non-coding upstream 105810 18994717 ~ 18995281 (-)
G18137 NA non-coding upstream 106612 18995519 ~ 18995727 (-)
LOC110497762 LOC106573859 other downstream 481687 18390123 ~ 18450517 (-)
LOC110497564 LOC106573866 other downstream 781609 18089520 ~ 18098678 (-)
G16161 LOC106573901 other downstream 1619306 17255236 ~ 17257241 (-)
G16100 LOC106573897 other downstream 1740190 17131420 ~ 17136357 (-)
LOC110492105 homer3 other downstream 2004619 16838135 ~ 16871992 (-)
LOC110502937 ccl25 other upstream 741586 19630376 ~ 19633058 (-)
G20266 NA other upstream 1910213 20799120 ~ 20800008 (-)
LOC118945319 NA other upstream 2196391 21085298 ~ 21089250 (-)
LOC110507736 LOC106573601 other upstream 2647026 21535882 ~ 21565723 (-)
G21993 NA other upstream 3492963 22381870 ~ 22382208 (-)

Expression


Co-expression Network