Item | Value |
---|---|
gene id | LOC110500115 |
gene name | LOC106573822 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048565.1 |
NCBI id | CM023219.2 |
chromosome length | 95772356 |
location | 18922258 ~ 18954045 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
zinc finger RNA-binding protein-like isoform X2 |
id | description |
---|---|
K13203 | ZFR; zinc finger RNA-binding protein |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036961390.1 | False | 4754 | mRNA | 0.51 | 19 | 18922258 | 18954045 |
XM_036961439.1 | False | 4751 | mRNA | 0.51 | 19 | 18922258 | 18954045 |
XM_036961486.1 | False | 4718 | mRNA | 0.51 | 19 | 18922258 | 18954045 |
XM_036961542.1 | True | 4715 | mRNA | 0.51 | 19 | 18922258 | 18954045 |
18,888,000
18,892,000
18,896,000
18,900,000
18,904,000
18,908,000
18,912,000
18,916,000
18,920,000
18,924,000
18,928,000
18,932,000
18,936,000
18,940,000
18,944,000
18,948,000
18,952,000
18,956,000
NC_048565.1
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gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110499562 | LOC106573826 | coding | upstream | 43341 | 18859952 ~ 18878917 (+) |
tnfaip8l1 | LOC106573828 | coding | upstream | 69304 | 18841198 ~ 18852954 (+) |
LOC110499138 | LOC106573831 | coding | upstream | 156301 | 18737655 ~ 18765957 (+) |
LOC110499030 | LOC106573833 | coding | upstream | 232036 | 18678540 ~ 18690222 (+) |
LOC110531985 | LOC106573857 | coding | upstream | 364199 | 18528546 ~ 18558059 (+) |
LOC110500236 | LOC106573821 | coding | downstream | 3882 | 18957927 ~ 18972186 (+) |
LOC110500307 | LOC106573820 | coding | downstream | 70171 | 19024216 ~ 19041967 (+) |
LOC110500387 | cherp | coding | downstream | 98530 | 19052575 ~ 19064650 (+) |
calr3a | crt | coding | downstream | 114947 | 19068992 ~ 19076771 (+) |
rad23ab | LOC106573817 | coding | downstream | 122779 | 19076824 ~ 19084655 (+) |
G17453 | NA | non-coding | upstream | 121339 | 18761536 ~ 18800919 (+) |
G17340 | NA | non-coding | upstream | 230495 | 18690274 ~ 18691763 (+) |
G17317 | LOC100380752 | non-coding | upstream | 344991 | 18574104 ~ 18577267 (+) |
G17143 | NA | non-coding | upstream | 640143 | 18281385 ~ 18282115 (+) |
G17062 | NA | non-coding | upstream | 744473 | 18177378 ~ 18177785 (+) |
G17555 | NA | non-coding | downstream | 29414 | 18983459 ~ 18983729 (+) |
G17561 | NA | non-coding | downstream | 36766 | 18990811 ~ 18991072 (+) |
G17566 | NA | non-coding | downstream | 40172 | 18994217 ~ 18994606 (+) |
G17567 | NA | non-coding | downstream | 45055 | 18999100 ~ 18999303 (+) |
G17576 | NA | non-coding | downstream | 54846 | 19008891 ~ 19009130 (+) |
ccdc124 | cc124 | other | upstream | 931082 | 17975918 ~ 17991176 (+) |
LOC110495874 | LOC106573877 | other | upstream | 1257250 | 17654164 ~ 17673094 (+) |
LOC110492876 | LOC106613263 | other | upstream | 1954468 | 16962997 ~ 16967790 (+) |
LOC110492606 | LOC106573909 | other | upstream | 2001849 | 16916482 ~ 16920945 (+) |
LOC118941201 | NA | other | upstream | 2341376 | 16578956 ~ 16592967 (+) |
G18481 | NA | other | downstream | 610804 | 19564849 ~ 19565221 (+) |
LOC110502506 | LOC106573550 | other | downstream | 614740 | 19568684 ~ 19575028 (+) |
LOC110503939 | LOC106573564 | other | downstream | 909746 | 19863734 ~ 19865619 (+) |
G19083 | NA | other | downstream | 961541 | 19915586 ~ 19915832 (+) |
G19359 | NA | other | downstream | 1288600 | 20242645 ~ 20242875 (+) |