LOC110506380


Basic Information

Item Value
gene id LOC110506380
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 20885537 ~ 20902039 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002470964.2
CAGCCAGGAGGGAAAACCTGAATGCTTATGAGGGAGTGGGCGTATTAGTGAAGGCTGGACTAACGAGGATTGAAAACACTGTGAAACAAAAAGAAAAGGCTTCTTGCAGTCAGATTGCAGTTCCGGCCTCCTGatcatccgctcaagaaaaaattgTTGTCatggctggctgaaggactggaccaaggtgcagcatgGCACACTGTCTTTATACGATCAGCCATAGATACCACCAGACACCCAAAGTCCATTTCTCAGTTCCTATGACCTCTTGTAAGCGCCGTTGATGTCTTGATAGCATTTGATCAACATGTCCTTGAGAAGTGTAACCCTGCTTGGAAAGAAGGTGCAACACCCATGTGTCCTGATTCAACAGGTGAGTCATGTATAGcttctcccatttctctctaacTCATTCTCCATGTCGTTCACTCAAACTCACGTGTGCACATTtgcagagaagaggaagagattaGCCAATTACAGTCATTTCTAACAATGATTGTTGCAGGAATGATATGACAAACATCACCTTTGAAAAAGACAATATTTGATTGTCTCTTTAATGCCTCTTTACACATACTTATATTTTTGCATTTACTTTTCTTGGGGGATTCTCTGTCCGGGACAATGTCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002470964.2 True 638 mRNA 0.43 5 20885537 20902039

Neighbor

gene id symbol gene type direction distance location
LOC110532063 ncan coding downstream 42626 20586586 ~ 20842911 (-)
trnaa-agc NA coding downstream 357713 20527752 ~ 20527824 (-)
LOC110506262 LOC106573581 coding downstream 403725 20367990 ~ 20481812 (-)
LOC110505853 LOC106573580 coding downstream 523471 20320374 ~ 20362066 (-)
gpx4a LOC106573579 coding downstream 566789 20311803 ~ 20318748 (-)
rfxank rfxank coding upstream 17587 20919626 ~ 20922933 (-)
tmem221 LOC106573585 coding upstream 25770 20927809 ~ 20932452 (-)
LOC110532071 LOC106573588 coding upstream 86017 20988056 ~ 21005209 (-)
LOC118945319 NA coding upstream 185329 21085298 ~ 21089250 (-)
LOC110507379 LOC106573593 coding upstream 226148 21128187 ~ 21133777 (-)
G20307 NA non-coding downstream 22344 20862022 ~ 20863193 (-)
G20299 NA non-coding downstream 32654 20852451 ~ 20852883 (-)
G20273 NA non-coding downstream 75952 20809355 ~ 20809585 (-)
G20272 NA non-coding downstream 77424 20807885 ~ 20808113 (-)
G20224 NA non-coding downstream 161919 20723140 ~ 20723618 (-)
G20419 NA non-coding upstream 172860 21074899 ~ 21080084 (-)
G20423 NA non-coding upstream 192284 21094323 ~ 21094522 (-)
G20425 NA non-coding upstream 218863 21120902 ~ 21121351 (-)
G20456 LOC106573594 non-coding upstream 272445 21174484 ~ 21175171 (-)
G20266 NA other downstream 85529 20799120 ~ 20800008 (-)
LOC110502937 ccl25 other downstream 1252920 19630376 ~ 19633058 (-)
mydgf LOC106573827 other downstream 1999885 18876547 ~ 18888907 (-)
LOC110497762 LOC106573859 other downstream 2490677 18390123 ~ 18450517 (-)
LOC110497564 LOC106573866 other downstream 2790599 18089520 ~ 18098678 (-)
LOC110507736 LOC106573601 other upstream 633894 21535882 ~ 21565723 (-)
G21993 NA other upstream 1479831 22381870 ~ 22382208 (-)
G22350 LOC106573623 other upstream 1937806 22839845 ~ 22843305 (-)
G23394 NA other upstream 2721987 23624026 ~ 23624349 (-)

Expression


Co-expression Network