tmem221 (LOC106573585)


Basic Information

Item Value
gene id tmem221
gene name LOC106573585
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 20927809 ~ 20932452 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021586079.2
TCTAACTTGTATAAATTTGTATAGTTTCCCCCCGGCTGTGGACTGCTTCGGACGAGCACATCAACGCATTGTTCCGGAGAATCCAAGTGAAAAGTCCATTGTTGTTGCGAAGTTTTTAATCTGGGGATTTAAAGAACATCACATGCTCGGCTGGGGGAGTGGGTGCTCGCGCACAATACGCAAATAACACTCTAATTCCATGATCGGACTCTAAATCACAGGTTTCTTACCTTTTCCTATTCAAAACATTTTTCTACACTTAAAACTACATTTTATGTTAGTTTGAAGCCTTTGGAAAAGAGGACCGCAAGAAGGATCCGGAGGATAAAGTGGATTCCCACCGCGATAACTTTTTCCAAGGAAGACAAGTGCGTCGACGTCAGTCCGTGATTTATTACCCAAATATGACGGTTTACAGCCAGCGGTCTTTGATGGTCCTTGCTTTATTAGGGATCCTATCAGGGATTATGTCTCTGCTATCGGTCAATCTGATTTTCCATTTACAAACACAACAGATTGCTGTGAAGGAATCTCCCCCCACCATCTCCATCGTGCCAACTAATGTTTGGGCAGTGCTGATGCCAGTGTCTACAGTGCTTTCTGCTCTGTCTCTCACGCTCAATTTGAGCTCTGTCGTGGTCTGCCTTCTGCACAGCTACTTTACAACCGAGATATGCAGAGGAGAAGATGATACTGAAAGAGCAGACTGGTTCCTATTGGATAGCCGAGCTGTCCGACATGTGGCCATCGGACTATTTTGCCTTGGGGTTTCAGTATACTTAGCAGctaTGTCCATCTACATGCTGCTGGTGTTTGAGGTAGAGACAGGCATAGCGAGCGCATGCGTACTGGCCTCGGGCATCCTGATTCTGCTGATGATCGTGATTCACTCCCTGGTCAAAGCCGCCCGTACCGCCCAACACTACCGCGGTGGGGAACACACTGACACCTTGTACCAGAACCAGCACGGTGGGAGCACCCCTGCCGCCCGGCAAGGCAAGCTCCAAGACGGGGAAAAACCCAGGAGGCACCGCAACAACTCCCAACTCCACCGGCATTTGTCCTACCCCCCTCCCTGCACCGACCCTAAGCAGCATCACCAGCATCAGTACTCCCCATCCCACAGCCCTCAGAGCCACAGCAGTGACAAGGAGGGCTACAGTAGCGGTGGAAGTGGTTCTAGAATGCACAGGACCCTGTCAACAGAGTCAGGGCTGCTGCAGTCTCCATCTAAGCCCTGGAATGGCATTAACAATGAGATGCGGAGCGTGCTGGCCCGCAAGTCAGGAGCCTCCAGTAAAGACTCTACTCTGGTGTAACCTGACCTACAAAGTCTTAGCAGTTAGTACATTCCTAACCAACCATCAAACGTTCCGAAGAATACAGTATGGATAGAAAATATCTGAAGCTATTTAAAAGCTCTGAGCTATCCCTTCATGATCCAAGcaccactaatactattactGTACATTTCAATACAGACATACAGTGAAACTGTCATTTTAATACACCTTTCCTAACATCTCGTTCCCTTATTGCCTTTGTATTGACTTTTTACACAGAAACCATCACTATTAAACCCTCTAGAATGTTTACGTACTGGTATTCCAATGGAAAATGTTAGTAACTTATAGCTACAGCTAATGCTATAGTTGCTACGTGATTATACAATTTAACAAGTGGCAGAGAAATGCTTTATATTTTCAAAGTTGTTTGGTAAAGACCAAAAGGTGGTCTTTGAAATATATTGCCAAAACTGTATATTACACAATGTGTAGATAAATTTGGTAGTGTTTAGTCTGCATACTGTGAAACAAACATAAGTCATAACTTTGAATAAAGGTTGTGAGTATGTTGATACAAAACACTGTGTAAAAAATAAAGTGGAGCATTTTAAGTAAACCAGTATTAGCACATTCAGCTTCATTCTAGTGCACTTACTTGAAAGTCAAGAGAGTGCCTAGAAGTCCTTGAGTCCAAGTATAGCTTTGAGTGATGCCTGAGGAACGACTAACCTTGGACAGCGTCTTCCAGAGGTCAGGAGGAAGTGGATGGGGGATGTGGTGGAGTGGCAGGGGGAATGGGAGAGGGGGTCGCTTCATGTGCGCTGCATGCATGTGCCAATGGAGGGAAATAATAAAGTAAACAGAACTGAGACACAAAAATGGCAAATAAAATAATGCAAAGAAAGGATGATTGCACAGGAAAATAACTACAAACAATAAATGGTGGCCCACGTCTATGAAAAAGTTACCTTGGCTTTCACTCAAAAGGAGTTCATAAGCCTCATCAACTCCACCCTTGAGCAGGGAGATTGTGTTTTTTCTCCTCAGCAGTGATGAGTGGGTTGTGGGCAATCAGACAAATGAAGGATACAGTGTTGTTACTGTGTAAAGGACACAGTGTTATTATGGTTTCCCAGAGCCAAAGTGAGTGGTTGTTTACTGCCTCTTACCTGCGCCCCTGGGAGGTGCTGATCTGTTCCTTCATGCTGATGGCTTGACGAAGGAGGCCATCGATGCTTTTGAAGTACAGGCTGCTGTTTGTCATGCTTTTCACTGCACTGGAAATGAAAATATGAATGTGTGTTAACAAATACAACATTGAATTGCCGATCAATGTTTTCAATATAATTAAAATCCTAAACAGTAGACTTTAGACCATGACTCCAATTCCATCGCATAACTTTGGGTCATTGGACACCCCCTTTAGCCTTGTGGGAAATGCCCTGGCACTGCCCGATGCACCTGGCTGTGTTGAGTAACACTTGCCTAATAAATCTGACTTTTATACCAATTCTTGGTATACAGTCTGAAACAAAGCACTGCAAAATCGTAGAGTTTAAtgacaagccagaatgttgaataaattacatttgaacttt

Function

NR:

description
transmembrane protein 221-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021586079.2 True 2884 mRNA 0.44 3 20927809 20932452

Neighbor

gene id symbol gene type direction distance location
rfxank rfxank coding downstream 4876 20919626 ~ 20922933 (-)
LOC110506380 NA coding downstream 25770 20885537 ~ 20902039 (-)
LOC110532063 ncan coding downstream 84898 20586586 ~ 20842911 (-)
trnaa-agc NA coding downstream 399985 20527752 ~ 20527824 (-)
LOC110506262 LOC106573581 coding downstream 445997 20367990 ~ 20481812 (-)
LOC110532071 LOC106573588 coding upstream 55604 20988056 ~ 21005209 (-)
LOC118945319 NA coding upstream 154916 21085298 ~ 21089250 (-)
LOC110507379 LOC106573593 coding upstream 195735 21128187 ~ 21133777 (-)
LOC110511465 LOC106573796 coding upstream 259892 21192344 ~ 21193157 (-)
LOC118945781 NA coding upstream 300330 21232782 ~ 21242022 (-)
G20307 NA non-coding downstream 64616 20862022 ~ 20863193 (-)
G20299 NA non-coding downstream 74926 20852451 ~ 20852883 (-)
G20273 NA non-coding downstream 118224 20809355 ~ 20809585 (-)
G20272 NA non-coding downstream 119696 20807885 ~ 20808113 (-)
G20224 NA non-coding downstream 204191 20723140 ~ 20723618 (-)
G20419 NA non-coding upstream 142447 21074899 ~ 21080084 (-)
G20423 NA non-coding upstream 161871 21094323 ~ 21094522 (-)
G20425 NA non-coding upstream 188450 21120902 ~ 21121351 (-)
G20456 LOC106573594 non-coding upstream 242032 21174484 ~ 21175171 (-)
G20266 NA other downstream 127801 20799120 ~ 20800008 (-)
LOC110502937 ccl25 other downstream 1295192 19630376 ~ 19633058 (-)
mydgf LOC106573827 other downstream 2042157 18876547 ~ 18888907 (-)
LOC110497762 LOC106573859 other downstream 2532949 18390123 ~ 18450517 (-)
LOC110497564 LOC106573866 other downstream 2832871 18089520 ~ 18098678 (-)
LOC110507736 LOC106573601 other upstream 603481 21535882 ~ 21565723 (-)
G21993 NA other upstream 1449418 22381870 ~ 22382208 (-)
G22350 LOC106573623 other upstream 1907393 22839845 ~ 22843305 (-)
G23394 NA other upstream 2691574 23624026 ~ 23624349 (-)

Expression


Co-expression Network