LOC118966627


Basic Information

Item Value
gene id LOC118966627
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 22226205 ~ 22231598 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118966627
ATGAAGAATACAACAAAGTCAGCTACATTTATTCCGAACCTCCACTATGGGGTTCAACGAAAATTCTCCGACTTCTTGGACCCTCAAGAGAGCTGGAAAGACGTTCTTGTTTCTATACACAAACCCACAGGGCAGCCGAAGTACTCTCAGGTACTCGCATTTAAGGTCATGTGCTGGTCATCTACTGTACTTCACTGATAGGACTGGTGGACATCTAACAGCACTGTGGGAGAGGTGGCATCTTGATGAGCCACAGGTTAATGGCTGCAGCCAGTATTCTGCTACAGGATTTCTTATCTATGATTTCACCCAAACATAAAAAACCTCCGCTCAACCATCCCCCAGCCACATCCCAGCCACCTGTGTCTCCAGGGGGAAAAGAGACAGTAAACAACACTGAAACCAGAACCTTGGGAAGGACAGAGGAACAGCCACTTCCAGACAGCACCTCAGAGCAGCAGAAGGTCGAGGAACCCAATGACACTTCAGGTTTTCTAAGGCTTTCTTTCCACTCACTGGCCTTGGTGAGGGCAGCTTTGGAACGGTCTACAAAGGCCTCATCAATGGTAAACCTGTGGCAGTGCAGAAACTACTCTCAATGGAAGACATCTCACTAGAGGagctgcaaattcagTTCATTCAAGAGGTCCAAATTCTTATGGCATAAGTGTTGAAACATGAAAACCTGGTAGACATAATCACCCTTGTTTTGTGTATGCTTACATGTCTAATGGGTCGTTGCCAGACCGGCTGGCTTGCTTGGACAGTAGTCCTCCTATGTTCTGGTACAGGAGATGTCTGACCGCCTTGGGAACAGCCAGAGGCTTGGATTATCTGCACAGCAGCAACCATGTCCACGAAGATGACAAGAGaaatatttttctGAATAAAGCACTTGTGCCGAAAATCTCTGACTTTGGGCTGACACGGGCCTCGGCCATGCGGTCGTCTTCGACAGTGATGACcgaaaaaaatctaatcaaacagtTTTTGGGTGCTACTGTGTTGCTAGAAATATTGTCTGGAGTCCTGCCAGTTGATGAAAATTGTGATCCTATGTTCCTGATGAACATGAAGGATGACATAGATGAGGAAGAAATGGCCCTGGAGGACAAGAGGATGCTGTCTTAATGACAGAAAGAACAAACAGCCACTGACGAAAGAGGTCCTGACGGAGCTTGAAGATGTTGTCAAAAGCATTTCACTAGAACAGCTGGGGCCTGAGAGGGAAGCAGACAACATGGGAGACGACCCCTTACCTCACACTTTTTCCTTAAACAAGGTTACTTTGCTCTAG

Function

NR:

description
PREDICTED: interleukin-1 receptor-associated kinase 4 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118966627 True 1297 mRNA 0.47 13 22226205 22231598

Neighbor

gene id symbol gene type direction distance location
LOC110508721 LOC106573612 coding downstream 22580 22111004 ~ 22203625 (-)
LOC110532081 LOC106573605 coding downstream 492919 21686077 ~ 21733286 (-)
LOC110508066 LOC106613744 coding downstream 621776 21587517 ~ 21604429 (-)
LOC110507736 LOC106573601 coding downstream 660482 21535882 ~ 21565723 (-)
cirbp LOC106573597 coding downstream 857317 21362992 ~ 21368888 (-)
LOC110508988 NA coding upstream 161380 22392978 ~ 22400323 (-)
LOC110509244 LOC106573616 coding upstream 203077 22434675 ~ 22437595 (-)
LOC110509312 NA coding upstream 231797 22463395 ~ 22487550 (-)
LOC110509621 LOC106573620 coding upstream 260962 22492560 ~ 22574938 (-)
LOC110509695 LOC106573621 coding upstream 348714 22580312 ~ 22592645 (-)
G21827 twf1 non-coding downstream 10761 22212443 ~ 22215444 (-)
G21830 NA non-coding downstream 108536 22117161 ~ 22117669 (-)
G21223 NA non-coding downstream 269724 21956271 ~ 21956481 (-)
G21221 NA non-coding downstream 270390 21954662 ~ 21955815 (-)
G21212 NA non-coding downstream 275243 21950710 ~ 21950962 (-)
G21900 NA non-coding upstream 17235 22248833 ~ 22249067 (-)
G21904 NA non-coding upstream 21364 22252962 ~ 22253252 (-)
G21913 NA non-coding upstream 33618 22265216 ~ 22265429 (-)
G21917 NA non-coding upstream 36164 22267762 ~ 22267965 (-)
G21954 LOC106573613 non-coding upstream 85884 22317482 ~ 22317947 (-)
LOC118945319 NA other downstream 1136955 21085298 ~ 21089250 (-)
G20266 NA other downstream 1426197 20799120 ~ 20800008 (-)
LOC110502937 ccl25 other downstream 2593588 19630376 ~ 19633058 (-)
mydgf LOC106573827 other downstream 3340553 18876547 ~ 18888907 (-)
G21993 NA other upstream 150272 22381870 ~ 22382208 (-)
G22350 LOC106573623 other upstream 608247 22839845 ~ 22843305 (-)
G23394 NA other upstream 1392428 23624026 ~ 23624349 (-)
LOC110511130 LOC106573631 other upstream 1591102 23821656 ~ 23861029 (-)
G24542 NA other upstream 1991309 24222907 ~ 24226490 (-)

Expression


Co-expression Network