LOC110509244 (LOC106573616)


Basic Information

Item Value
gene id LOC110509244
gene name LOC106573616
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 22434675 ~ 22437595 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590202.2
AGCACGACAGGGACATTGAAGATCTCTTTGCTGTAATATTGCATTGTATTTTTGCTTATTCTATAAGCATACCTATTTTGAAGAAAGCCTTACATTTTTAAATTATCTTTTATCTCTTGTACTGTTGAACAAAACTTTAAAGATGAAGAAGTCTTTTGGAGTAGTGTGCATATCACTCATTTTATTTGCAGCTCTGTCAGAAACAATTGGATTAGTGATTGCGGGTAAAGAGAAGCGAGGGTGGACACTAAACAGTGCTGGCTACCTTTTGGGTCCCCACGGCATTGACGGTCACCGCACTCTCAGTGACAAGCATGGCCTTGCTGGAAAGAGAGGCATGCCCCTGGACGATGACTTCAAAACAGGTGCCTTGAGAATAGCAGATGAGGATGTAATACACACTGTCATTGACTTCTTATCATACCTGAAACTTAAAGAAATCGGAGCTCTGGATACCATgccttcctctctcacatcagaAGAGATGGATCAGCCCTAGTTCAACTGATCTCTTCTCTACGCCTTACCTGCCTACAAACAACAGTATCTGTACATTTCCCATTATACTGGTGTCATCATAACAACAATATACTAAACAGATTAATCACGTTCTTATTATAATTTGAAAGAAATGGACTGAATAAAACTTTTGAATGGCAAAA

Function

NR:

description
galanin peptides-like

GO: NA

KEGG:

id description
K05244 GAL; galanin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590202.2 True 662 mRNA 0.39 6 22434675 22437595

Neighbor

gene id symbol gene type direction distance location
LOC110508988 NA coding downstream 34352 22392978 ~ 22400323 (-)
LOC118966627 NA coding downstream 203077 22226205 ~ 22231598 (-)
LOC110508721 LOC106573612 coding downstream 231050 22111004 ~ 22203625 (-)
LOC110532081 LOC106573605 coding downstream 701389 21686077 ~ 21733286 (-)
LOC110508066 LOC106613744 coding downstream 830246 21587517 ~ 21604429 (-)
LOC110509312 NA coding upstream 25800 22463395 ~ 22487550 (-)
LOC110509621 LOC106573620 coding upstream 54965 22492560 ~ 22574938 (-)
LOC110509695 LOC106573621 coding upstream 142717 22580312 ~ 22592645 (-)
LOC110532100 LOC106573785 coding upstream 201639 22639234 ~ 22639992 (-)
LOC110532107 LOC106573785 coding upstream 202574 22640169 ~ 22649593 (-)
G21996 LOC106573613 non-coding downstream 47742 22386681 ~ 22386933 (-)
G21994 LOC106573613 non-coding downstream 49997 22384346 ~ 22384678 (-)
G21991 NA non-coding downstream 58663 22375781 ~ 22376012 (-)
G21988 NA non-coding downstream 67463 22366823 ~ 22367212 (-)
G22092 NA non-coding upstream 130447 22568042 ~ 22569972 (-)
G22052 NA non-coding upstream 138008 22575603 ~ 22575951 (-)
G22053 NA non-coding upstream 139227 22576822 ~ 22579656 (-)
G22099 NA non-coding upstream 157188 22594783 ~ 22595027 (-)
G22114 NA non-coding upstream 179940 22617535 ~ 22617843 (-)
G21993 NA other downstream 52467 22381870 ~ 22382208 (-)
LOC110507736 LOC106573601 other downstream 886902 21535882 ~ 21565723 (-)
LOC118945319 NA other downstream 1345425 21085298 ~ 21089250 (-)
G20266 NA other downstream 1634667 20799120 ~ 20800008 (-)
LOC110502937 ccl25 other downstream 2802058 19630376 ~ 19633058 (-)
G22350 LOC106573623 other upstream 402250 22839845 ~ 22843305 (-)
G23394 NA other upstream 1186431 23624026 ~ 23624349 (-)
LOC110511130 LOC106573631 other upstream 1385105 23821656 ~ 23861029 (-)
G24542 NA other upstream 1785312 24222907 ~ 24226490 (-)
LOC110514811 ccl8 other upstream 2114996 24552392 ~ 24554074 (-)

Expression


Co-expression Network