uba2 (sae2)


Basic Information

Item Value
gene id uba2
gene name sae2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 24050309 ~ 24072410 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021592634.2
ATCGAAGGGCCCCCCTTATCGGAGTAAGGAGGTGGTGCCTGCTGCTAGCCACATAGCTAGCTCCTCTCTCTTCTGGTCTACTGCAGTTTCTGTATTTTTCTGATCAACAATGGTACAACTAGTGGGGTCTCTCCGAAAAGAGCTCGCTGATTCCTTATCCGCTTGCCGGGTGCTGGTGGTCGGAGCTGGAGGAATTGGTTGCGAGCTCTTGAAAAATCTTGTACTCACCGGCTTCAAAAATATAGAAGTGATTGATCTGGACACTATTGATGTGAGCAACCTGAACAGACAGTTCCTGTTCCAGAAGAAACATGTGGGGAAGTCCAAGGCGCAGGTGGCAAAAGAGAGTGTGCTGCAATTCTGTCCCACTGCCAACATTACAGCCTATCATGACAGCATCATGAACCCAGAGTACAATGTGGAATTCTTCAGGAACTTCATGCTTGTCATGAATGCTTTGGACAATCGAGCGGCTCGTAACCATGTGAACAGGATGTGTCTTGCAGCTGACATTCCCCTTATTGAGAGTGGCACAGCTGGCTACCTTGGGCAGGTGACCGTTATTAAGAAGGGTCTTACTGAGTGTTATGAGTGCCAGCCCAAACCCACACAGAAAACCTTCCCTGGTTGTACCATTCGCAACACCCCCTCTGAGCCTATACACTGCATTGTGTGGGCCAAGTACCTGTTCAACCAGCTCTTTGGAGAGGAGGATGCAGATCAGGAGGTGTCCCCTGACACCGCTGACCCAGAGCTTACATGGAACCCTGCAGACACTGAAGCCCGAGCCACAGCATCTGATCAGGATGGAGACATCAAACGGGTGTCCACCAAGGACTGGGCACGATCCACAGGCTATGACACAGTCAAACTCTTCAACAAGCTTTTCAAAGATGACATCCAGTACCTCCTGACCATGGACAAGCTGTGGAAGAAGAGGAAAGCGCCACTCCCTCTGGATTGGCTTGAGATTCAGAAACTTGCGTGTCCCCAGGAGGTGACTGGGACGGGACTGAAGGACCAACAGGTGTTGGGTGTGGCAGGTTACTCCCAGCTCTTCTCCCGCAGCGTGGAAACCCTGCGCTCCATGCTGGCTGACAAGGGGGATGGAGCAGAACTTGTGTGGGACAAGGATGACCCTCCAGCGATGGACTTTGTGACAGCAGCCGCCAACTTGCGCATGCATATCTTTAGCATGAACATGAAGAGCCGTTTTGACATCAAGTCCATGGCAGGAAACATCATCCCAGCAATCGCCACAACCAATGCAGTCATTGCTGGCCTCATTGTGCTGGAGGCTCTGAAGATCCTGTCTGGAGATGTGGAGCAGTGTCGCACGATCTTCCTGAACAAGCAGCCTAACCCCAGGAAAAAGCTGCTTGTTCCATGTGCTTTGGACCCACCCAGTGCCAACTGTTATGTGTGCGCCAGCAAGCCAGAGGTTACAGTCAAACTGAATGTGCACAAAACTCTTGTGCTGGCCCTTCAAGACAAGATATTAAAGGAGAAGTTTGGGATGGTGGCGCCAGATGTGCAGATCGAGGATGGGAAAGGGACAATCCTCATCTCCTCTGAGGAGGGTGAAACTGAAGCAAACAACAGCAAGTTTCTGTCTGACTTTGGGATACGACATGGTAGCCGTCTGCAAGTGGATGACTTTCTGCAGGATTACACACTCCTGGTTAACGTGATTCACTGTGAGGACTTGGAGAAGGATGTGGAGTTTGAGGTGGTGGGTGACGCCCCTGACAAagccccaaccccacccagcgcACAAGAGGACAAGAATGTTGCCAACGGCAACAAAGACTCTGCAGAACCGTCCACCTCTTCCAAAGCCCCTGCTGAGCAGGACGATGTTCTGATAGTTGATTCGGACGAGGAGGAGCCGTCCTCCAGTACTATGGATGTCCGCATGGAGTCAGGAGGCCACAAGAGGAAGCTCCATGATGCTGAGACAGGCGAGGCTTCAGCCAAGCGCCAACGCCTGGATCAGCCTTTGGCTGCCGATGAGGAAGATGATGACATCATTGCACTAGACTAGTATGTCTCTCCTGGCCCCTCCTCTCTTCAGAAGGATGAAACTCTGTTTGTGTTTTCATACGCTGTTCCTCTTAccaaacatgtgtaaatataaatGTACAAAAAACTGTTGTGtgccagtttttttttattttggtcCATCACCGATGGATAAAATACTTTTagctttttgtattttttataatgTATTTGTCATGTCACAAGTCAGGGTGTGGTTTGTAGGGAGACTGAAAGAAACAATTAATAGCAAATGTTTTTTCAGTGTATTTCATCCAGTAAACTTACACCTCCATTGTTTTTTCAGTGTATTTCATCCAGTAAACTTACACCTCCATTGAAGGAATGTAAAAAAAAGTTATCAAACCCAATCATTTGAGTCAAGCGTTGACTGAATTTTTCTTTGTAATTGTTAACCATTGACCACTTGCAGGGTGAGTTGCTTTGTCACAGctggttaaaaaataaattgttCTGGAGTTTGTTACTTTATTTATAAATCTTTCATGTGGTTTATAGTTGGAGCCATCATATCCAGGTCTCAACCTCCCTTTGGACCAAATAGATAATGACACAAACACTTACTCAT

Function

symbol description
sae2 Enables double-stranded DNA binding activity and single-stranded DNA endodeoxyribonuclease activity. Involved in nucleic acid metabolic process and positive regulation of cellular metabolic process. Located in cytoplasm and nucleus. Part of Mre11 complex.

NR:

description
SUMO-activating enzyme subunit 2

GO:

id name namespace
GO:0006464 cellular protein modification process biological_process
GO:0005524 ATP binding molecular_function
GO:0008641 ubiquitin-like modifier activating enzyme activity molecular_function

KEGG:

id description
K10685 UBLE1B, SAE2, UBA2; ubiquitin-like 1-activating enzyme E1 B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021592634.2 True 2629 mRNA 0.48 17 24050309 24072410

Neighbor

gene id symbol gene type direction distance location
LOC110512077 LOC106573636 coding downstream 876 24034225 ~ 24049433 (-)
LOC110511826 LOC106573635 coding downstream 34532 23981215 ~ 24015777 (-)
LOC110511707 LOC106573634 coding downstream 104366 23941895 ~ 23945943 (-)
LOC110511130 LOC106573631 coding downstream 189280 23821656 ~ 23861029 (-)
LOC110510928 det1 coding downstream 275444 23769293 ~ 23774865 (-)
LOC118948024 NA coding upstream 19194 24091604 ~ 24102924 (-)
ccdc113 ccdc113 coding upstream 46814 24119224 ~ 24126628 (-)
LOC110513500 LOC106573646 coding upstream 160806 24233216 ~ 24288176 (-)
LOC110513605 LOC106573647 coding upstream 225288 24297698 ~ 24343156 (-)
LOC110513914 LOC106573648 coding upstream 335635 24408045 ~ 24410610 (-)
G23839 NA non-coding downstream 134951 23915118 ~ 23915358 (-)
G23838 NA non-coding downstream 137202 23912882 ~ 23913107 (-)
G23833 NA non-coding downstream 141072 23908912 ~ 23909237 (-)
G23832 NA non-coding downstream 141748 23908257 ~ 23908561 (-)
G23831 NA non-coding downstream 143193 23906897 ~ 23907116 (-)
G23932 NA non-coding upstream 2991 24075401 ~ 24075685 (-)
G23940 NA non-coding upstream 9682 24082092 ~ 24082376 (-)
G24514 NA non-coding upstream 24166 24096576 ~ 24096892 (-)
G24515 NA non-coding upstream 31138 24103548 ~ 24104450 (-)
G23394 NA other downstream 425960 23624026 ~ 23624349 (-)
G22350 LOC106573623 other downstream 1207004 22839845 ~ 22843305 (-)
G21993 NA other downstream 1668101 22381870 ~ 22382208 (-)
LOC110507736 LOC106573601 other downstream 2502536 21535882 ~ 21565723 (-)
G24542 NA other upstream 150497 24222907 ~ 24226490 (-)
LOC110514811 ccl8 other upstream 480181 24552392 ~ 24554074 (-)
znf276 znf276 other upstream 791677 24853824 ~ 24865158 (-)
LOC118956210 NA other upstream 855938 24910984 ~ 24938701 (-)
LOC110518671 klhl36 other upstream 872498 24944908 ~ 24972465 (-)

Expression


Co-expression Network