cdk10 (cdk10)


Basic Information

Item Value
gene id cdk10
gene name cdk10
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 24808572 ~ 24819243 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021595131.2
GATCTCACCATCTTGAACCCCGGGAAAGCTTGTAGTCGTCCATTTAATAGACAAAGCACCGAGTGTGTGGTTTCCTGCCAATCATACTGTTTTGAATGTTTCTGGACGTATATTCGCGTACTGGTCGCATTTTCTGTCATCACAGTACAGCAAAGGGCGAATGAACCATCATCTTGGGCGTCCAAATAACAATGGAGAACGCTGCAGATACTGACCCGGACCCCATAAAGCTGAAGTCGATCAAGAACAACAGAACGTTCACAGTACCGCAAAAACACAGGTTTGGGAACTGTAGGAGTGTGAAAGAATTTGAGAAACTGAACCGAATCggcgagggaacatatggaattGTGTACAGAGCTCGAGACACCAGGTCGGATGATATTGTAGCACTGAAGAAGGTCCGGATGGACAAGGAAAAGGATGGGATCCCTATCAGTAGTCTGAGAGAGATTACCCTGTTGCTCAAACTCAGACACCCCAACATAGTGGAGTTAAAGGAGGTGGTGGTGGGAAGTCACCTGGAGAGtcTCTTCCTAGTTATGAGTTACTGTGAGCAGGACCTGGCCAGTCTGCTGGAAAACATGCCAACACCGTTCTCAGAGGCACAGGTGAAGTGTATAGCTCTGCAGCTGCTGAGAGGTCTGGATTATCTTCACCTCAACTTTATTCTGCACAGGGATCTGAAGGTGTCCAATCTGCTGATGACAGACAAAGGCTGTGTAAAGATTGCTGACTTTGGCTTGGCTCGTTGCTACGGTATCCCCCTACAGCCTATGACGCCCCGGGTGGTGACATTGTGGTATAGAGCCCCAGAGCTCCTCCTAGGGACCAAGACTCAGACCACAGCCTTAGACATGTGGGCGGTGGGCTGCATCCTGGCTGAGCTGCTTGCACATAAACCTCTGCTGCCAGGGGGTTCTGAGATCCAACAAGTGGACCTCATAGTGCAACTGTTGGGTACCCCTAATGAAAACATCTGGCCGGGCTTCACTCGTCTTCCCCTAGTTGGACAGTACAGTTTGAGGAAACAACCATACAACAATTTGAAGAATAAGTTCACCTGGTTGTCTGATGCAGGGCTGCGTTTACTCAACCTTCTCTTCATGTACAATCCTCTACGCAGGGCCACAGCTAAGGACTGCTTGGAGAGTTCCTACTTTAAGGAGAAACCTTTGCCTTGTGAGGCTGACCTGATGCCAACCTTCCCTCATCATCGCAATAAAAGGGCAGCCCCAGCTGTAGAGAGCCAATCAAAACGCAATAAAGTGTAACTTCATTAACATCCTTGATCGCAgtttaaataaatgaatgaatatCTTAATGTTTACTACTACACAGATTATGCACCTGGTTGTAAAAATGTGTTGTCATAGAATGCATGTACCTGGCAGTAATTATCCAAATCAATGGGGTGATGGTAAGCTTTCAAGTATTCCACAGTTCAGTCCTCAGTTACTGCTTGCAAAATCCTATTTCTTTCACTGTGTCTGATGAATATCCAAAAGTATGTGATTAACATGCATAAGTTCAATTTAATTCACCAatgttgctttttttttttaaatggatgtTGGTTAACCTTTGGCAGGTTCACGTAACCAATAGGATTTGGTTTGCTGTATGTACATAGACATTTTTTATCCCATGAAATTCAATGAATATTGTAGTTTTAGTTTTTAATAAACTGCTTTTTCAAATTA
>XR_002472482.2
AGCGGATCTCACCATCTTGAACCCCGGGAAAGCTTGTAGTCGTCCATTTAATAGACAAAGCACCGAGTGTGTGGTTTCCTGCCAATCATACTGTTTTGAATGTTTCTGGACGTATATTCGCGTACTGGTCGCATTTTCTGTCATCACAGTACAGCAAAGGGCGAATGAACCATCATCTTGGGCGTCCAAATAACAATGGAGAACGCTGCAGATACTGACCCGGACCCCATAAAGCTGAAGTCGATCAAGAACAACAGAACGTTCACAGTACCGCAAAAACACAGGTTTGGGAACTGTAGGAGTGTGAAAGAATTTGAGAAACTGAACCGAATCggcgagggaacatatggaattGTGTACAGAGCTCGAGACACCAGGTCGGATGATATTGTAGCACTGAAGAAGGTCCGGATGGACAAGGAAAAGGATGGGATCCCTATCAGTAGTCTGAGAGAGATTACCCTGTTGCTCAAACTCAGACACCCCAACATAGTGGAGTTAAAGGAGGTGGTGGTGGGAAGTCACCTGGAGAGtcTCTTCCTAGTTATGAGTTACTGTGAGCAGGACCTGGCCAGTCTGCTGGAAAACATGCCAACACCGTTCTCAGAGGCACAGGTGAAGTGTATAGCTCTGCAGCTGCTGAGAGGTCTGGATTATCTTCACCTCAACTTTATTCTGCACAGGGATCTGAAGGTGTCCAATCTGCTGATGACAGACAAAGGCTGTGTAAAGATTGCTGACTTTGGCTTGGCTCGTTGCTACGGTATCCCCCTACAGCCTATGACGCCCCGGGTGGTGACATTGTGGTATAGAGCCCCAGAGCTCCTCCTAGGGACCAAGACTCAGACCACAGCCTTAGACATGTGGGCGGTGGGCTGCATCCTGGCTGAGCTGCTTGCACATAAACCTCTGCTGCCAGGGGGTTCTGAGATCCAACAAGTGGACCTCATAGTGCAACTGTTGGGTACCCCTAATGAAAACATCTGGCCGACAGAAGAATGCACGATCAAGAAGGGATAcatagagagcagttgcttcgCGAGGGCTTCACTCGTCTTCCCCTAGTTGGACAGTACAGTTTGAGGAAACAACCATACAACAATTTGAAGAATAAGTTCACCTGGTTGTCTGATGCAGGGCTGCGTTTACTCAACCTTCTCTTCATGTACAATCCTCTACGCAGGGCCACAGCTAAGGACTGCTTGGAGAGTTCCTACTTTAAGGAGAAACCTTTGCCTTGTGAGGCTGACCTGATGCCAACCTTCCCTCATCATCGCAATAAAAGGGCAGCCCCAGCTGTAGAGAGCCAATCAAAACGCAATAAAGTGTAACTTCATTAACATCCTTGATCGCAgtttaaataaatgaatgaatatCTTAATGTTTACTACTACACAGATTATGCACCTGGTTGTAAAAATGTGTTGTCATAGAATGCATGTACCTGGCAGTAATTATCCAAATCAATGGGGTGATGGTAAGCTTTCAAGTATTCCACAGTTCAGTCCTCAGTTACTGCTTGCAAAATCCTATTTCTTTCACTGTGTCTGATGAATATCCAAAAGTATGTGATTAACATGCATAAGTTCAATTTAATTCACCAatgttgctttttttttttaaatggatgtTGGTTAACCTTTGGCAGGTTCACGTAACCAATAGGATTTGGTTTGCTGTATGTACATAGACATTTTTTATCCCATGAAATTCAATGAATATTGTAGTTTTAGTTTTTAATAAACTGCTTTTTCAAATTA

Function

symbol description
cdk10 Enables kinase activity. Acts upstream of or within histone phosphorylation; negative regulation of neuron apoptotic process; and neurogenesis. Predicted to be active in nucleus. Is expressed in brain; eye; liver; and pleuroperitoneal region. Orthologous to human CDK10 (cyclin dependent kinase 10).

NR:

description
PREDICTED: cyclin-dependent kinase 10 isoform X1

GO: NA

KEGG:

id description
K02449 CDK10; cyclin-dependent kinase 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021595131.2 False 1703 mRNA 0.45 13 24808572 24819239
XR_002472482.2 True 1760 mRNA 0.45 14 24808572 24819243

Neighbor

gene id symbol gene type direction distance location
gbrl2 gbrl2 coding downstream 97110 24697687 ~ 24711462 (-)
ciapin1 LOC106573658 coding downstream 197037 24596085 ~ 24611535 (-)
LOC110514811 ccl8 coding downstream 254498 24552392 ~ 24554074 (-)
LOC110513914 LOC106573648 coding downstream 397962 24408045 ~ 24410610 (-)
LOC110513605 LOC106573647 coding downstream 465416 24297698 ~ 24343156 (-)
znf276 znf276 coding upstream 34581 24853824 ~ 24865158 (-)
LOC110517792 LOC106573801 coding upstream 79668 24898911 ~ 24905644 (-)
LOC118956210 NA coding upstream 91741 24910984 ~ 24938701 (-)
LOC110518671 klhl36 coding upstream 130591 24944908 ~ 24972465 (-)
LOC118956655 NA coding upstream 192938 25012181 ~ 25020388 (-)
G24882 NA non-coding downstream 12224 24794487 ~ 24796348 (-)
G24871 NA non-coding downstream 33272 24771916 ~ 24775300 (-)
G24844 NA non-coding downstream 79790 24728551 ~ 24728782 (-)
G24842 NA non-coding downstream 84035 24724273 ~ 24724537 (-)
G24718 NA non-coding downstream 141068 24666624 ~ 24667504 (-)
G24896 NA non-coding upstream 2434 24821677 ~ 24822128 (-)
G24851 NA non-coding upstream 12149 24831392 ~ 24834589 (-)
G24915 NA non-coding upstream 36148 24855391 ~ 24855619 (-)
G24917 NA non-coding upstream 38003 24857246 ~ 24857546 (-)
G24940 NA non-coding upstream 77529 24896772 ~ 24896987 (-)
G24542 NA other downstream 582082 24222907 ~ 24226490 (-)
LOC110511130 LOC106573631 other downstream 982081 23821656 ~ 23861029 (-)
G23394 NA other downstream 1184223 23624026 ~ 23624349 (-)
G22350 LOC106573623 other downstream 1965267 22839845 ~ 22843305 (-)
G25115 zfpm1 other upstream 461349 25280592 ~ 25281030 (-)
G25117 zfpm1 other upstream 462361 25281604 ~ 25282018 (-)

Expression


Co-expression Network