LOC110518671 (klhl36)


Basic Information

Item Value
gene id LOC110518671
gene name klhl36
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 24944908 ~ 24972465 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110518671
ATGTCTCAGGTCTACTGTTGGGCGGAGCAAGCAGACTTCCTCCTGCAGGGTCTGAATGAGCAGCGTCAGCGCAGCCAGCTGTGATTCATGGTGCTGGTGGCTGATGAGCAGCGTATCCCAGCCCACTGCGCTCTACTGGTCGTCTCAAGCCCTTCCTTCCAGGCTATATTCACCCTGCGAATGAGGGAGGAGCGACAGGAATAGGTGGAGCTGGTGGGGGCCTCCTTTAGGCTGTGGTGGACTTCCTCTACAGTGGGGAGCTGCTGCTGGACGGAGGAAACATTGACCGTGTTCTGGAGACGGACCACCTGCTGCAGGTGTGGAGGGCAGTGGACTTCTGCTGCCGGTACCTGGAGAAAGAGGTGAGTGAGGACAACTACCTGTAACTGCAGGAGCTGGCTCTGCTCTACAGCCTGGAGAGACTAGatgcactgtacatcgaCCACTTCATCCTGGAACGCTTCGccaccctctccttcaccccaGGCTTCCTGAGTGATGTCTGGCTGCCCAAGCTCCTACCTGGCCAGCAGGCAGGTCCAGCATGAGAATGAGCAGGCTCTGCTCCAGGCTTCTCTCCAGTGGCTGAGCCACACGCCAGACCGCCCTGAACACGCCTGCCAGCTCCTCTCCCACATCCGCGTCCTCACTGCTGTATGGGCTCTGCTGCCCCTGGAGGCCAGCTGTGAGGTGCTGGTGGAGGAGGCTCTGGACTACCACACAATGGCCAGTGCCTAACCAGTTTTGCAGACAGGTGGCAGGGAGGGGAGGAGCAGTTCCTACTTGTGGGTGTTGAGGTGTCAGAGCCTGGGGGAGGAGCTGATTGCAGATGTTCGCTGGCTAGATTTAGACTCTGGTGGGTGGATGGTGGAGATCCAGATCCCAGCCCAGAGGAGCCACCACCGTGTCACTGTACTGGGGGATTTCATCATGCAACTCATCACAAGTTAATGGAGGTGATGCTGCCAGGAACCTGCTGTACTGCTACAAACCCAGAGACAACCAGTTGATCAAGGAGGCCATATCTACCAGATCGGGCCGTACCGGCGAGTCGTTTTTGAGCTATGACCCCAGAGGAGGAGACGTCTGGGTGGAGCGCCAGGCCATGTCATCTGCACGGGGGTGGCACTGCATGACGTCACTTCACCACCTCATCTATGTAATCGGGGGCAGCAATGACCACGAGGAGAGCATTGAGTGCTTTGACATCCTGGTGGTGGAGGCCTTTGACCCCCAGAGTGAACAATGGATCTGTATAGCCCCCCTCCTCCAGCCTAACAGTGAGGCGGTCTGTGGGGGTAAGATctttaacaaaatatatatttga
>TU28762
cttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcacaaagttcaagggggccgaatactttcgcaaggcactgtacatcgaCCACTTCATCCTGGAACGCTTCGccaccctctccttcaccccaGGCTTCCTGAGTGATGTCTGGCTGCCCAAGCTCCTACCTGGCCAGCAGGCAGGTCCAGCATGAGAATGAGCAGGCTCTGCTCCAGGCTTCTCTCCAGTGGCTGAGCCACACGCCAGACCGCCCTGAACACGCCTGCCAGCTCCTCTCCCACATCCGCGTCCTCACTGCTGTATGGGCTCTGCTGCCCCTGGAGGCCAGCTGTGAGGTGCTGGTGGAGGAGGCTCTGGACTACCACACAATGGCCAGTGCCTAACCAGTTTTGCAGACAGGTGGCAGGGAGGGGAGGAGCAGTTCCTACTTGTGGGTGTTGAGGTGTCAGAGCCTGGGGGAGGAGCTGATTGCAGATGTTCGCTGGCTAGATTTAGACTCTGGTGGGTGGATGGTGGAGATCCAGATCCCAGCCCAGAGGAGCCACCACCGTGTCACTGTACTGGGGGATTTCATCATGCAACTCATCACAAGTTAATGGAGGTGATGCTGCCAGGAACCTGCTGTACTGCTACAAACCCAGAGACAACCAGTTGATCAAGGTAAAGCTCTGCTCTTACACTGCAACCCAACCTAACATTTCCAAAATGACTCCAATTATGTTTAATCTCTTCTCTAGAGTGCCCCAATGAACCAGTGATGTGTGGATTTCTACCTGGGAGCCATTGGGGAGTGTCTGATTGCTGTTGGAGGGCGTAATAATAACGGGCTCTGTTGTCAGTGGAGATTTTCACCCCTACAGACGACTGCTGTACATATGTAGCAGGACAGCCCAGGGGAGAATTCAACTCACCCTGATTCACAGTCACACTACTCCTCAATGGTCTCCCAAAGCGTCACCTGTACTCCTGTCTCTGACATTACTTCCCCCTGTTAAGCAGCAAGACAACAGAGTAAGGAGAACAACACTCTGCCTAAGGGGTAGCTCTCTGTTGTCACGGTTCCCAATACACATACTATAACTATTGTGCCTCTTTGCCTGGCAGGCTGGCACAACTCACATTAAAGTCCTTTCTCTCACTTGTCCCTTTCTACTCCATTTCTCTGCAGATTCACCTATGGCAATGCAGGCACATCTCATAAAGGATTGGTCTACATCTCAGGAGGCCATATCTACCAGATCGGGCCGTACCGGCGAGTCGTTTTTGAGCTATGACCCCAGAGGAGGAGACGTCTGGGTGGAGCGCCAGGCCATGTCATCTGCACGGGGGTGGCACTGCATGACGTCACTTCACCACCTCATCTATGTAATCGGGGGCAGCAATGACCACGAGGAGAGCATTGAGTGCTTTGACATCCTGGTGGTGGAGGCCTTTGACCCCCAGAGTGAACAATGGATCTGTATAGCCCCCCTCCTCCAGCCTAACAGTGAGGCGGTCTGTGGGGGTAAGATctttaacaaaatatatatttgacccttattttaccaggtaagttaactgagaacacattctcatttacagcaacgtgctggggaatagttacaggggagaggaggggggatgaacgAGACAATCTACGTGCTGGGGGGCTACAGCTGTGAGAGCATGGTTTTCTCACAGGTCACACAGGGGTTTGACCCTGAAAATGCCAGTGGGTGCAGGACCCAGACCTTTCCAAAAACATTACAGGCAGGGGAAAAGAGCTGTGTAGCTGCCAATGGAACACAGTGGATGACAGAACTACCTATATCATATCATCTCTAAAAGCACAAAACCTCACAAAAGGACTAGTTCTGTTTCAGCTAATTTGTGAAGACTTCCAACATGCTTAACATTGGGGACTATGTGAAAAAGTTTTACTTTGATGTGCTTCGTATTACAATTGAAGCataatctatactgaacaaaaatgtaaatgcacatgtaacaatttcaaggattttactgagttagagttCATAGAAAGAAAtaagtaaattgaaataaattcattaggccctaatctatggatttcaaatgattggcaggggcacagccatgggtgggcctgggagggcataggcccacccacttgggagccaggtccacccactggagggccaggcccagctaatcagaatgagtttttccccacaaaagggctttatgacAGGcaaaaatactcctcagcaccccccttccccctcctcagacgctcccgcaggtgaagaagctggatgtgggggtcctgggctggtgtagttacacgtggtctgcagttgtgaggccagttggatgtactgccaagtTCTATAAAAATGATGTTGGTCGAGGAAGGataagtgcacctgtgtaatcagCTTCAGAGCAAcacttttttaaaattatttaacctttatttaactaggcaagtcagttaagaacaaattcttattttcgatgacggcctaggaacagtgggttaattgccttgttcaggggcagaacaacagatttttaccttgtcagctcggggattcgagccactaggctacctgctgccactttgtgtttatattttggttcagtatatgTGTTTTAAACTAAACGTTTTGTTTGAGTTATGATGATAAGAAAAAATATGGCATCCCTTCAGAATCAGGCAGACAGGGCACAGTGTTGGCACAGAGGGCATACTGTATATCTATTCAAATCATGTCAACAAAAAACTATAGCATCCATCCATACCTTCAGCGCCACATTTCTATTTATCATCACAATTTCACATTATAGGTAAACAATAAACACTGATTGAAGACCATTTGCAGGCCAATGTTGAGGAGGTGGATAGTAATCTGGCCTTATTTTCAGGTTGAGAAACAGTTATCTTATTCTCCCAAGTGACTTCTCTGTCTCTTGTCTCTGATCCCCAGGGACTCTCATTCAAAGGGGTAGTATGGATGAGACTTCAAGCTGAAGAACAGAAACATGTCAGGGTAGGAGCAGTTGTTCTCTACATGGtattattgatgtattaagtATTTGATTAAGGAAGCGTTGAACCTGTCTTACGAGTCGATGATGCAGCTCTTCCAGCCTCTATTCAGTCCTCTCAGTGCCGACATGTCCTCCTCAGTCAGAGAGAAGTCAAAGATTAGTGTTTTCCAGAATGTGATTGGGTTTCACACTTTTGGGGATCACTGCAATACCCTGCTGCACATGGTACCTCAGCAgtacctgaaacacacacacatggtccttagatgcagagcccagatgcacacacacacactagatgtgTGTTTCTACTGAACTATCTAGTCTAACCTGAGCAGGGCTCCGTCGGTGCTTCTTAGCCACGTCTCCTACCACAGGGTCTTCCAGCAGCTTCTCAGGATCAGTGTCTCCACAGTGACTGTAGGAAGTATTGACACAGTCAACTTTTGGAACATAGGGAGGGATGTTTACTCGGCCAACCGTGGGGTCAATAGTGCAGAACAGAGCAATATAGTGCAGGATCATAGTCCAGTCGCTAATGTCTACATGTTATTGTCAGGAGGACTCACAATTCTTTGGGTCTTCCAGGGGAACCTAAGGGGCTGTAGGCAGTGAGGGTGATGTTGCGAGACTTGCAGAACTCCACCAGGTCAGACTGGACCAGGTAGGGATGCAGCTCCACCTGCaggagcggagggagagagataatgagattACAGAGTTGTAAGAACGCTCTTTCGGCTGTTATCCATTCTTGTCTACTACCCTCTGACCCAGTAGCGACACCCACACACTCTTTCAGAATGGTAAACACACCCGTTTGCACATGTAGTGTCCATGCATAAACACAGTTAACTGTGTATTGCACTGGTTGAGCTGGTTAAAGGAGTGAAATATGTTTgtgacacaggaggttggtggcacattaATTGGGGAGTACGGGCTCATAGTACTGGCTGGAATGaaatgaatggaatggtatcgaattcatcaaacacattccatgaactccattccagccattattatgagctgtcctcccctcagtagcctccTGTGGTTTGTGAGGTACTCAGGGTTTCATAATAGTGTATTTGAAATAGCTAAAGTTGCAGTGTAAAGCCTTGAAGAACCTGGTTGACTGCAGGGGGAACCTTGGCCACAGAGAGCAGTCTCTCCAGCTGGAGGACGTTGAAGTTGGACACGCCAATGCTCTTCACTTTCCCTGAGGCCTGCAAGGCCTCCATCCCCTACATCACATAGCAGACATTACAGCACAGGCACAGTAATACACCACACTTCAAGATACCAAAAATAGACCacgaaaaaatacaaataattttgTTGTTAGGAGACAGTATAATGATGTTGATGAAGAGGAGATGATAGTGTTTTAACCTTCCACACGTCCACATAGTCAATGTCagtggtgagcatttctccatctCTCATAGGGAAGAGCTCATCATCCACTTTCTGGAAGGAATGAaaaagatacagtgcattcggaaagtattcagaccccttgactttttccacattttgt
>TU28760
ttgaaaaaacatttttttattctgAAATGATTGATCATGTGCCCAAGTTCAGTTTTTAAAAGTCTCCTCAAATCTCCTAGATAAATTTGCTCTCAATAATAAATCAAAGgttatagaaaataaaagtaatctttaaaaaaaaacattcctatTTGGAGTTTAATCCAAATAAAAAGAGAGGCTACACTAGAGAAATGGCTGCTCCTGGGTCGGGCTAACTGAAAGTGCTATACAGCCCTGTCCCATTGGTTTGTGGGCCATAGGCAAATCATAGTCTCACCCCCATGAGTGGAGGATAGCCAATCACAGTGTAgtgtccacaaacacacacacctcccatgaTGCCCCTCTCTCCATGGGAGATTAAGGCAGTTAACACAGTGGGGTATACGTTGGGGGTGGATTGGGAGATGAGAAAAGCTGGGCAGGAAAGACCTCTATTGCCAAGGATGCATGTTTGGACTACAACCACAGAAGAATACAGTAAAAGCACGATGATGACAAGTCAAATCAGATAGAGGCCCTTGCCCTTGTTCTGACAAACAGTACAGTAATGTGTCTTTTCCAGTTGTAACATACACAGCCCCCCAGATTGATAAGAGTTCGTAACGTTGCTCTGCAGCTGAGATGATAGTGAGATGatgcacagtacagtagataatCATCCATGACCGTACAGgtgagagggctgaggataggacTATAGCCATATATATGTCTGAGTGTGTCTCAACATGCTTttttgtgagagtgtgtgtgttgctgtgtgttaatgtgtgtacctgtgtgtaagtgtttgtacatgtgtgtgtgtatatatatccccctctctccctcatccaggCATGaatacccctccctcccccaaaaGGTAGCAGCCGCTCCCCTGCCCCGCCCTGGTggactctcctctactctccctggGCGTCATAGTTGGCCCCACCCGCCTTCTTCAGCTCGGTGCGAATGTAGTCCTCCTCCAGCTCACGAGGATCACTGATCATGAACTCCTTGGCAAAGTTCTGGACAATGTCTTTCACCAATGTCTTGTCAGTGCTGATCTTGGCACGCTGCAGGCCGCTCACGTTTTCCCCTATCCAGGTGATGAGGGTGAACTTGGCACGCTTGCTCATGGCGTCACCCGTCGTGATCCGCACAAAGCCAAAGAGACGcacatcatctgatagagaaagagagtcagagagtcagaaATTAGACTGACCATCAGACAAGCAGAAACATGCAGAGAGGCTGAGGACACCATTTCCATTCCCAGCTGCCTCATGACAGGTAATTAATTACAGTATAGTTGTTAGAGAAATGGATTTGTCTCCATGTCCATGTTGGCAAGGCCTGATTCCTGTGTACTGTGAGTTGATTGAGCTTTGTGAGAGTGTTTCTATGCTGCTGTAAGAAGTATGAATGGCTTGTTATGGTGACACTACCGTGGCCATGCACCAAATCCAAAAGTGTGATGAATCGGTGAGTACAAGAGACAGGAGAAGGTATTCAGGTCAACAGACTAAataaaaaggagggagggaggcagtgaTTCTGGGTTCACTCTttcacgctctgtctctctcacacaaacacatcacATGTTAGCCCTACATCACCAGCTGCATTGTCTTGGAATAGAGATGTTTTTTTCTGTATAGTCCAACACACCAAATATGTGCCAAATCAGTTCCCTAAATAGATTATAGTAAAGGTAATAACACATTTATGGCATGATTCTGCTCTGGTCTGGGCCCTGGCTCTTCCTTACCATTAATAATGCCCCATTGGTTCCCTCTGTACTAGAGGTTGACCAATTCATCGGAATGGCcgacaatcggaaatctgtatttttggacaccggtTTTGCCGATTttaaactttttattttatttttaacacctttatttaatctttatttaactaggcaagtcagttaagaacacattcttattttcaatgacggcctaggaacggtaggttaactgccttgttcaggggcagaacgacagattttcaaaaattatttaacctttatttaactaggcaagtcagttaagaacaaattcttattttcgatgacggcctaggaacagtgggttaattgccttgttcaggggcagaacaacagatttttaccttgtcagctcggggattcgagccactaggctacctgctgccactttgtgtttatattttggttcagtatatgTGTTTTAAACTAAACGTTTTGTTTGAGTTATGATGATAAGAAAAAATATGGCATCCCTTCAGAATCAGGCAGACAGGGCACAGTGTTGGCACAGAGGGCATACTGTATATCTATTCAAATCATGTCAACAAAAAACTATAGCATCCATCCATACCTTCAGCGCCACATTTCTATTTATCATCACAATTTCACATTATAGGTAAACAATAAACACTGATTGAAGACCATTTGCAGGCCAATGTTGAGGAGGTGGATAGTAATCTGGCCTTATTTTCAGGTTGAGAAACAGTTATCTTATTCTCCCAAGTGACTTCTCTGTCTCTTGTCTCTGATCCCCAGGGACTCTCATTCAAAGGGGTAGTATGGATGAGACTTCAAGCTGAAGAACAGAAACATGTCAGGGTAGGAGCAGTTGTTCTCTACATGGtattattgatgtattaagtATTTGATTAAGGAAGCGTTGAACCTGTCTTACGAGTCGATGATGCAGCTCTTCCAGCCTCTATTCAGTCCTCTCAGTGCCGACATGTCCTCCTCAGTCAGAGAGAAGTCAAAGATCTGCAGGCAACACACTTTCTTTTTGAGTGTTTATTGTACCATTGACACATTTGATTTATGTTAGTGAGTAATGTACGTGAAAGTTCAGTtaataactacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccac

Function

symbol description
klhl36 Predicted to be involved in protein ubiquitination. Orthologous to human KLHL36 (kelch like family member 36).

NR:

description
PREDICTED: coactosin-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110518671 False 1327 mRNA 0.57 3 24949834 24953314
TU28762 False 4582 TUCP 0.47 2 24944908 24951387
TU28760 True 2923 lncRNA 0.43 3 24948044 24972465

Neighbor

gene id symbol gene type direction distance location
LOC118956210 NA coding downstream 37139 24910984 ~ 24938701 (-)
LOC110517792 LOC106573801 coding downstream 44190 24898911 ~ 24905644 (-)
znf276 znf276 coding downstream 84676 24853824 ~ 24865158 (-)
cdk10 cdk10 coding downstream 130591 24808572 ~ 24819243 (-)
gbrl2 gbrl2 coding downstream 238372 24697687 ~ 24711462 (-)
LOC118956655 NA coding upstream 58867 25012181 ~ 25020388 (-)
LOC110519016 LOC106573687 coding upstream 91131 25044445 ~ 25083238 (-)
LOC110519226 LOC106573688 coding upstream 135982 25089296 ~ 25112992 (-)
kiaa0513 kiaa0513 coding upstream 201411 25154725 ~ 25172586 (-)
LOC110519951 LOC106573692 coding upstream 419516 25372830 ~ 25381869 (-)
G24942 NA non-coding downstream 52007 24897610 ~ 24897827 (-)
G24940 NA non-coding downstream 52847 24896772 ~ 24896987 (-)
G24917 NA non-coding downstream 92288 24857246 ~ 24857546 (-)
G24915 NA non-coding downstream 94215 24855391 ~ 24855619 (-)
G24985 NA non-coding upstream 6702 24960016 ~ 24965492 (-)
G24959 NA non-coding upstream 45232 24998546 ~ 24999010 (-)
G24945 NA non-coding upstream 88246 25041560 ~ 25042769 (-)
G24948 NA non-coding upstream 89589 25042903 ~ 25044176 (-)
G25011 NA non-coding upstream 112576 25065890 ~ 25066926 (-)
LOC110514811 ccl8 other downstream 396272 24552392 ~ 24554074 (-)
G24542 NA other downstream 723344 24222907 ~ 24226490 (-)
LOC110511130 LOC106573631 other downstream 1123343 23821656 ~ 23861029 (-)
G25115 zfpm1 other upstream 327278 25280592 ~ 25281030 (-)
G25117 zfpm1 other upstream 328290 25281604 ~ 25282018 (-)
LOC110520292 gnao1 other upstream 2682774 27631001 ~ 27781768 (-)
G28870 NA other upstream 3104129 28057443 ~ 28066305 (-)
G29355 NA other upstream 3750573 28703887 ~ 28704356 (-)
G24952 NA non-coding upstream 113609 25086074 ~ 25087355 (-)

Expression


Co-expression Network