LOC110519016 (LOC106573687)


Basic Information

Item Value
gene id LOC110519016
gene name LOC106573687
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 25044445 ~ 25083238 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036974229.1
AGGCAGCAGACAGTGGAGCTAAAAGACGCACAGCGCATCCGCTTGCCTCCCCATTGACGTCACTTTGGTATCACATGAACGAGAAGGGACCAATCCAAGTGGCTCTATCGAAGTGCTTGGGTTCTTTCACGAAGATAGAAGAAAAAGACAGTAAAAAGGAACCATGCCAATGACCGTTTAAAGACCAAGAAACACGTCGCCTTTGGATTTGGGTGTTTTCTATCAAAGCTACGTGACTTGTATGAGTTCAATCTGTGGAAGATGTTATCTGGACTGGAGTTGGCAGAATGGACATGGCCCGAACATATTGAGTAGCTCGTTGGGGGTGCTAAACGCGGACAGGATAGACATTACAGTGGGAATGGTGTGGATATAGGATTATTTGCCTATCCAATAACTGCTCTTTTACTTTTCCGTTCTGAAATACCCCCATCAAAGACTCTTTCATGGCTTTTCTATCAGTGGCTCCGCCGTGTCTGTTTTTCGCCCACAACACTCTTTTAACAATTGAGGTCGTATCGCGGTAGCTTTGCTCCCAAGGTTTACAATCCAATCCAATTGGCTTTtcttttgaaatatatatatttaaactaaTATTAGATAGGCCTACATTGTTACCTATAGGATCTTTTTGCGACTAGTTGAATATGGATTTTAACAGCAGCGGCGGGGGTAACGAGCTACATAATAAACAATTCTATCAATCTGAGGAGAGCAAGCCTTTGCTGGGGGAGATGTCTGCGCCGACGCCACCGGAGGGGAATAATATTAAGTTAGGCGCCGGGCCGTGCAAGAGAACCCTTCTCCATTGCAGCAGCGGGATGCGATATAAACTACTACAGGAGGGGGACATCCAGGTGTGTGTGGTCAAACACCCTCGGACCTTCCTCAGCAAAATTCTAACCTCAAAATTCTTACGAAGATGGGAACCGCACCACCTCACCTTGACAGACTGCAGCCTGGCGTCTGCGACGCCCACGGGGTACATGGAGGCTGCCCTGTCCTACAGTACCATAGAGGACCTGCAGCTGCTCTCCTGGGATAATGCCCCCAAATATTGTGTGCAGCTCAGCTTCCCCGGGGGCACCGTCCTCCTGCAGGCAGCCAACAGCTATCTGCGGGACCAGTGGTTTCATTCCCTGCAGTGGAAGAAAAAAATCTATAAGTACCGTAAGGTTCTGAACAACCCGAGTCGCTGGGAGGTGGTTCTGAAGGAGATCAGATCACTGGTGGACATGGCCTTGACCTCTCCCCTGCAGGACGAGTCCATTCACCAGGCCCCGCTGCAAATCATCTCCACCCTGCTGGCCGAGAACACCAACCTCAGCTCTCAGGACCATGAGAACATCATTGTGGCCATCGCTCCTCTCCTGGAAAAGAACCACCCTCCACCGGACCTGTGTGAGTTCTTCTGCAAGcaCTGTCGGGAGCGTCCGCGGTCGATGGTTGTGATTGAAGTGTTCACCCCTGTGGTCCAGAGAATCCTCAAACACAACATGgacTTTGGGAAATGCCCCAGACTGCGTCTCTTCACTCAAGAGTACATCTTAGCTTTAAATGAGCTCAACGCTGGGATGGAGGTCGTGAAGAAATTCATTCACAGCATGCATGGTCCCTCCGGGCAATGCCCTCACCCCCGCGTCCTGCCCAACCTGGTGGCAGTGTGCCTGGCTGCCATCTACTCCTGCTACGAGGAGTTAATCAACAGCCGGGACAACTCCCCAAGTCTGAAGGAGATCAGGAACGGCTGCCAGCAACAGAATGAGCGTAAACCccccctgcccctccgcctgctgCGCCCAGAGCCCCCCACACCTCCACCAACGTCCCTGctgcccctctcccctcccccctcagctcccctctccccttctcccacactgcccctctctcccccgccctccatcgTCAACTCCAGTGAGATCCTGGTGGAGTTGGAACGCAACAACAACACTGCCAACGCCAGGCGGAAGGGCCCAGCGGGAAGCGACAGTGAGCCCAACCTGATCGACTGTTTGCTGGTCAGCCCCGCACTCAACGCCCTGTCAATCCAGCTGCCTGCCCAGGCCGACCGCGTGTTGGGCTGCTTCGCACTCATCCTCAAAATGCTGTCTGACTACGATGACTGGAGACCAGCCCTGGCCAGTCTGCTGCAGCCCATCCCCTTCCCCAAAGAGGCCCTTGCACACGCCAAATTCACAAAAGAGCTGAAATATGTTATTCAGAGGTTTGCAGAAGACCCCAGACAGGAAGTCCACTCCTGTCTGCTCAGTGTGCGCTCTGGAAAGGACGGTTGGTTCCAGCTCTACAGTCCAGGGGGTGTGGCCTGTGATGATGATGGGGAGCTCTTTGCCAGCATGGTCCACATCCTTATGGGTTCCTGCTACAAAACAAAGAAGTTCCTCCTGTCCCTGGCTGAAAACAAGCTTGGACCCTGCATGCTCCTGGCTCTGCGTGGGAACCAAACCatggttgagatccTGTGTCTGATGCTGGAGTACAACATCATGGAGAACAAGGACACCCAGCTGCAGATTATCTCCACCCTGGAGAGCACTCCGGTGGGCCTTCACATGTACGAGCAGCTGTGTGACAGGCAGAGGGAGCTCAAAGAGCTGCAAAGAAAAGGAGGCCCAACCCGACTTACTCTGCCCTCCAAGTCTACGgatgCAGACCTTGCAAGGCTACTGAGCTCTGGCTCCTTTGGGAACCTGGAGAACCTGAGTCTTGCCTTTACCAATGTCACCAGTGCCTGTGCTGAACAGCTCATCAAGCTGCCCTCTCTCAAACAGCTCAACCTGTGGTCCACCCAGTTTGGAGATACAGGATTGCGGTTGCTGTCTGAACACTTGGCGTGTCTGCAGGTGTTGAATCTGTGTGAAACACCCGTGACCGACGCCGGCCTGCTGTCACTCAGCTCCATGAAGAGCCTGTGCAGTTTGAACATGAACAGCACCAAGCTCACAGCAGACACATATGATGACTTAAAGGCAAAACTCCCCAATCTGAAGGAGGTGGACGTCCGCTACACCGAGGCCTGGTGAACACATCCTGTATGACATCACTAGAACACCAACTCCCACATCATCCAAACATCATCGGAACACAGAGCCTCTCTTACATCAACAATAAGAGGATCCTCTCCCATCTCTAGATGAGGACGCTTTTATCTGGAGATGACATCAAAACGCCACGACCTCTCTAGTAACATGTCCATGGAAAATTACTATCTTTCTAGTGACATCATCAAAATACAAGGACCTGTTCTTTCTTGTGAAATCAACATACAAGGACCTCCTTTTTAGTGACATCATCAAAATGCAAGGACCCACTTTCTTGTGACATAAGGGACCCTCTcttgctctcattctctctcatgtGTTGTTGCTCACTCAGTCCCTGTCCACATCCTATTTGCCCTCAATAGACTCGTCATAGATTTCCTCTGTGTTGTGTCATATGTACACAGAACAAAGTTAACAAATGGTGGATCTTGCCCctttccccccccctccctctcctgctctctctaagGACCTTTGAGTTTAAAttacctctcttccctccatttaCTGGGAGCTATTCTACCCTTGTCTGatgaaggctggataaccaggtcaCATTCCAGTACATTTCTTTGATATTGCCTCTAGTCAATCCAAATGTAGCTTTAAAAGACTATTCAACTGTCATTTTGGTCTTGTTGTTTTGTTTGGGTTCTTTCAGGTTAAGAGTCGGGCCTTTCCAGTCCTTCATTAGGAATGAGGTGCtacctcaaaaaaataaaagttgcAAGACTGTGCCTAATGCCTTGTA

Function

NR:

description
C-Maf-inducing protein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036974229.1 True 3816 mRNA 0.51 21 25044445 25083238

Neighbor

gene id symbol gene type direction distance location
LOC118956655 NA coding downstream 24057 25012181 ~ 25020388 (-)
LOC110518671 klhl36 coding downstream 91131 24944908 ~ 24972465 (-)
LOC118956210 NA coding downstream 131750 24910984 ~ 24938701 (-)
LOC110517792 LOC106573801 coding downstream 138801 24898911 ~ 24905644 (-)
znf276 znf276 coding downstream 179287 24853824 ~ 24865158 (-)
LOC110519226 LOC106573688 coding upstream 6058 25089296 ~ 25112992 (-)
kiaa0513 kiaa0513 coding upstream 71487 25154725 ~ 25172586 (-)
LOC110519951 LOC106573692 coding upstream 289592 25372830 ~ 25381869 (-)
LOC118959932 chtf8 coding upstream 376504 25459742 ~ 25463093 (-)
LOC110520001 wfdc1 coding upstream 390298 25473536 ~ 25485212 (-)
G24948 NA non-coding downstream 269 25042903 ~ 25044176 (-)
G24945 NA non-coding downstream 1676 25041560 ~ 25042769 (-)
G24959 NA non-coding downstream 45435 24998546 ~ 24999010 (-)
G24985 NA non-coding downstream 78953 24960016 ~ 24965492 (-)
G24952 NA non-coding upstream 2836 25086074 ~ 25087355 (-)
G24954 NA non-coding upstream 5424 25088662 ~ 25089255 (-)
G25026 NA non-coding upstream 30692 25113930 ~ 25114287 (-)
G25030 NA non-coding upstream 40764 25124002 ~ 25124227 (-)
LOC110514811 ccl8 other downstream 490883 24552392 ~ 24554074 (-)
G24542 NA other downstream 817955 24222907 ~ 24226490 (-)
G25115 zfpm1 other upstream 197354 25280592 ~ 25281030 (-)
G25117 zfpm1 other upstream 198366 25281604 ~ 25282018 (-)
LOC110520292 gnao1 other upstream 2552850 27631001 ~ 27781768 (-)
G28870 NA other upstream 2974205 28057443 ~ 28066305 (-)
G29355 NA other upstream 3620649 28703887 ~ 28704356 (-)

Expression


Co-expression Network