Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966628 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 25732955 ~ 25747219 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: DNA topoisomerase 1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118966628 | True | 763 | mRNA | 0.53 | 8 | 25732955 | 25747219 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520015 | LOC106573699 | coding | downstream | 20517 | 25679909 ~ 25712438 (-) |
| LOC110520008 | kcng4 | coding | downstream | 166362 | 25537115 ~ 25566593 (-) |
| LOC110520001 | wfdc1 | coding | downstream | 247743 | 25473536 ~ 25485212 (-) |
| LOC118959932 | chtf8 | coding | downstream | 269862 | 25459742 ~ 25463093 (-) |
| LOC110519951 | LOC106573692 | coding | downstream | 351099 | 25372830 ~ 25381869 (-) |
| LOC110520038 | LOC106573702 | coding | upstream | 147997 | 25895216 ~ 26501491 (-) |
| LOC110520062 | NA | coding | upstream | 1179079 | 26926298 ~ 26939324 (-) |
| LOC118966748 | NA | coding | upstream | 1396141 | 27143360 ~ 27143413 (-) |
| LOC110520098 | LOC106573710 | coding | upstream | 1458692 | 27205911 ~ 27215251 (-) |
| LOC110532124 | LOC104966864 | coding | upstream | 1478944 | 27226163 ~ 27299859 (-) |
| G26216 | LOC106573700 | non-coding | downstream | 758 | 25712544 ~ 25732197 (-) |
| G26230 | NA | non-coding | downstream | 65398 | 25666939 ~ 25667557 (-) |
| G26217 | NA | non-coding | downstream | 79560 | 25651058 ~ 25653395 (-) |
| G26164 | NA | non-coding | downstream | 148091 | 25584421 ~ 25584864 (-) |
| G26149 | NA | non-coding | downstream | 173615 | 25559027 ~ 25559340 (-) |
| G26328 | NA | non-coding | upstream | 119025 | 25866244 ~ 25932705 (-) |
| G26538 | NA | non-coding | upstream | 450933 | 26198152 ~ 26245155 (-) |
| G26573 | NA | non-coding | upstream | 501628 | 26248847 ~ 26340716 (-) |
| G26654 | NA | non-coding | upstream | 626424 | 26373643 ~ 26374041 (-) |
| G26760 | NA | non-coding | upstream | 759453 | 26506672 ~ 26506938 (-) |
| G25117 | zfpm1 | other | downstream | 450937 | 25281604 ~ 25282018 (-) |
| G25115 | zfpm1 | other | downstream | 451925 | 25280592 ~ 25281030 (-) |
| LOC110518671 | klhl36 | other | downstream | 781568 | 24944908 ~ 24972465 (-) |
| LOC118956210 | NA | other | downstream | 794254 | 24910984 ~ 24938701 (-) |
| znf276 | znf276 | other | downstream | 868121 | 24853824 ~ 24865158 (-) |
| LOC110520292 | gnao1 | other | upstream | 1888869 | 27631001 ~ 27781768 (-) |
| G28870 | NA | other | upstream | 2310224 | 28057443 ~ 28066305 (-) |
| G29355 | NA | other | upstream | 2956668 | 28703887 ~ 28704356 (-) |
| G29906 | mef2a | other | upstream | 3533057 | 29280276 ~ 29280700 (-) |
| LOC110520932 | LOC106573529 | other | upstream | 5384674 | 31131151 ~ 31132900 (-) |
