LOC118966629


Basic Information

Item Value
gene id LOC118966629
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 26511657 ~ 26538362 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989341.1
ATGGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGGGGGGGGAGACTCACGGCcgacggggggggggggactcgcGGCCGACGGGGGGGGGGAGACTCGCGGCCGACGGGGGGGGGGAGACTCGCGGCCGACGGGGGGGGGGAGACTCGCGGCCGACGGGGGGGGGAGACTCGCGGCCGACGGGGGGGAGACTCGCGGCCGACGGGGGGGGGGAGACTCGCGGCCGACGGGGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGGGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGAGGGGGAGACTCGCGGCCGACGGGGGAAAGTCCGCACCGAGGGGGGGGGAGACTCGCGGCCGACGGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCGGCCGACGGGGGGGAGACTCGCGGCCGACGGGGGGGAGACTCGCGGCCGACGGGGGGGGAGACTCGCCGCGAGTCTCCCGTCCGCCACCCCGTCCGCCACCCCGCGGCCGACGGGGGGGAAGCGGCGGCAGACGGGGGGGAAGCGGCGGCAGACGGGGGGAACCGGCGGCAGACGGGGGGAACCGGCGGCAGACGGGAGACTCGCGGCGGACGGGAGACTCGCGGCGGACGGGGGGGGAGAGACTCGCGGCGGACGGAGTGGCGGACGGGAGACTCACGACGGACGGGGGGGGGAGACTCGCGGGGGATGGGGGTATGGGAGTTTCTATTGTCCCATGCATTCACACGGCAGCAGCACAGCTCCCTGTGTCACATCATTGCATCCTGCAGTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989341.1 True 1173 mRNA 0.79 3 26511657 26538362

Neighbor

gene id symbol gene type direction distance location
LOC110520043 NA coding upstream 19310 26486813 ~ 26492347 (+)
LOC110520029 LOC106573701 coding upstream 722258 25777611 ~ 25789399 (+)
LOC110520022 LOC106573700 coding upstream 779455 25712423 ~ 25732202 (+)
LOC118945804 NA coding upstream 1008687 25491535 ~ 25502970 (+)
LOC110519996 LOC106573694 coding upstream 1038230 25463100 ~ 25473427 (+)
si:ch211-216l23.2 LOC106573703 coding downstream 141849 26680211 ~ 26696018 (+)
LOC110520060 LOC106573705 coding downstream 175402 26705640 ~ 26865295 (+)
LOC110532115 NA coding downstream 331428 26869790 ~ 26900556 (+)
LOC110520069 LOC106573707 coding downstream 405861 26944223 ~ 26951092 (+)
n4bp1 LOC106573708 coding downstream 584032 27122394 ~ 27135020 (+)
G26758 NA non-coding upstream 7184 26504230 ~ 26504473 (+)
G25985 NA non-coding upstream 191826 26317824 ~ 26319831 (+)
G25791 NA non-coding upstream 458682 26052495 ~ 26052975 (+)
G25461 NA non-coding upstream 915444 25594251 ~ 25596213 (+)
G26859 NA non-coding downstream 117750 26656112 ~ 26656366 (+)
G26860 NA non-coding downstream 118301 26656663 ~ 26656862 (+)
G26938 NA non-coding downstream 241073 26779435 ~ 26780164 (+)
G26979 NA non-coding downstream 320832 26859194 ~ 26859677 (+)
LOC110519986 LOC106573695 other upstream 1055540 25448856 ~ 25458271 (+)
G24365 kiaa0513 other upstream 1343329 25167817 ~ 25168328 (+)
G24435 NA other upstream 1399796 25111210 ~ 25111861 (+)
G24307 NA other upstream 1654406 24856944 ~ 24857251 (+)
G26858 NA other downstream 116935 26655297 ~ 26655598 (+)
G27553 NA other downstream 775460 27257563 ~ 27316517 (+)
LOC110520258 LOC106560847 other downstream 1023957 27560102 ~ 27565152 (+)
G28280 NA other downstream 1306278 27844640 ~ 27845011 (+)

Expression


Co-expression Network