LOC110520135 (ar2bp)


Basic Information

Item Value
gene id LOC110520135
gene name ar2bp
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 27373262 ~ 27375453 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597236.2
CGATTACAAAAAATCAATTAGCTAGACAGCTACGTAGTTTGCTAACTAAATAGATTAAGAATGGACGTTAAAGAGCGAAATCCGCTGGGTGGTGGCGAGAACATCGTTGAAATGGTGGATTTGGATGAGGAGAATTTTGCTGTTTcaaaCTCATCAGATTCAGATGCAGCCTTTGATGCTGTCATTGGGAGTATTGAAGACATCATCATGGAGGACGACTTCCAGCACATGCAACAGAGCTTCATGGAGAAACACTACCTGGAGTTTGATGACTCCGAGGAGAACAAACTCACCTATACACCCATCTTCAACGAATATATTGAGCTGCTTGAGAAACAACTTGAGCAGCAGCTGATGGAGAGAATTCCCGGTTTCAACATGAGCACATTTACTCAGCTACTCAAGCAGCACAAAGACGAAGTGTCAGGAGACATCTTCGACATGTTGCTTACTTTTACAGACTTTATGACCTTCAAAGAAATGTTCATTGATTACAGAGCAGAGAAGGAGGGCCGAGGGCTTGACCTCAGTGATGGCCTAGTGGTGAGGTCTCTCAGCTCTACATCCTCCAAATCCATCAcctccagaacaacaacaaaactgAAGTAACTAATGAAGAGTCATCCCCAAACACATGACCAATAGTGCACTGTGCTGCTGACAACAGAACATAATTGTTTGTCTTGCCCATGCCCTCCAGTCACAGGGGACCACAGGGAACATCTGTCTTTCCCACAGCTTTTGTATTTGAACTGTTGTAGGTTTGCAATGGGAATGGTATCAGTCAGGTTGGTCTTTGTTTTACAAATAGCCTTTCTCTGGTTAAGATAGACACCTTTGTCCTCAGGGTGGGGTACATTGTTTTTTATAAAATTTGTGCTCAATGACTTGAGTTTTGTGCCCGTTACATTATTAACACGAATGCCAGAAGGTGTTTGTAGGTCAAGCATTTTAGACAGACTAAACAGTAGCCTAGTTGCTCAGCCCTTGGCATTGGTGGTTAGGAGAACTATATGCACCAGCAATGGGAAAAcacttcaatgtttttttttttttattgtactcATAGCCCTCCACAACAAACAGTATATGAAGCCTGAAAGACGAAACCTGGTACATTCAGTCCTAGGCTGTTTGGTCGATGGTGCTTTCTCAGATCCTTCTTTCTCATT
>XM_021597226.2
tccGGAACTAATCAGCTGGGATCTGTTTCTTTACCGGACTGAATTTACTGAAGGgaggttttttttttgttgccttggTAGCGATTACAAAAAATCAATTAGCTAGACAGCTACGTAGTTTGCTAACTAAATAGATTAAGAATGGACGTTAAAGAGCGAAATCCGCTGGGTGGTGGCGAGAACATCGTTGAAATGGTGGATTTGGATGAGGAGAATTTTGCTGTTTcaaaCTCATCAGATTCAGATGCAGCCTTTGATGCTGTCATTGGGAGTATTGAAGACATCATCATGGAGGACGACTTCCAGCACATGCAACAGAGCTTCATGGAGAAACACTACCTGGAGTTTGATGACTCCGAGGAGAACAAACTCACCTATACACCCATCTTCAACGAATATATTGAGCTGCTTGAGAAACAACTTGAGCAGCAGCTGATGGAGAGAATTCCCGGTTTCAACATGAGCACATTTACTCAGCTACTCAAGCAGCACAAAGACGAAGTGTCAGGAGACATCTTCGACATGTTGCTTACTTTTACAGACTTTATGACCTTCAAAGAAATGTTCATTGATTACAGAGCACACCCATACCTCCTCTGTCTGCAGGAGAAGGAGGGCCGAGGGCTTGACCTCAGTGATGGCCTAGTGGTGAGGTCTCTCAGCTCTACATCCTCCAAATCCATCAcctccagaacaacaacaaaactgAAGTAACTAATGAAGAGTCATCCCCAAACACATGACCAATAGTGCACTGTGCTGCTGACAACAGAACATAATTGTTTGTCTTGCCCATGCCCTCCAGTCACAGGGGACCACAGGGAACATCTGTCTTTCCCACAGCTTTTGTATTTGAACTGTTGTAGGTTTGCAATGGGAATGGTATCAGTCAGGTTGGTCTTTGTTTTACAAATAGCCTTTCTCTGGTTAAGATAGACACCTTTGTCCTCAGGGTGGGGTACATTGTTTTTTATAAAATTTGTGCTCAATGACTTGAGTTTTGTGCCCGTTACATTATTAACACGAATGCCAGAAGGTGTTTGTAGGTCAAGCATTTTAGACAGACTAAACAGTAGCCTAGTTGCTCAGCCCTTGGCATTGGTGGTTAGGAGAACTATATGCACCAGCAATGGGAAAAcacttcaatgtttttttttttttattgtactcATAGCCCTCCACAACAAACAGTATATGAAGCCTGAAAGACGAAACCTGGTACATTCAGTCCTAGGCTGTTTGGTCGATGGTGCTTTCTCAGATCCTTCTTTCTCATT

Function

NR:

description
ADP-ribosylation factor-like protein 2-binding protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597236.2 False 1172 mRNA 0.43 7 27373262 27375372
XM_021597226.2 True 1277 mRNA 0.43 7 27373262 27375453

Neighbor

gene id symbol gene type direction distance location
LOC110520123 LOC106573712 coding downstream 31256 27332548 ~ 27342006 (-)
LOC110532131 aars coding downstream 52136 27316672 ~ 27321126 (-)
LOC110532124 LOC104966864 coding downstream 73403 27226163 ~ 27299859 (-)
LOC110520098 LOC106573710 coding downstream 158011 27205911 ~ 27215251 (-)
LOC118966748 NA coding downstream 229849 27143360 ~ 27143413 (-)
LOC110520144 rspry1 coding upstream 387 27375840 ~ 27392581 (-)
LOC110520152 cpne2 coding upstream 29606 27405059 ~ 27445369 (-)
LOC110520192 nlrc5 coding upstream 71591 27447044 ~ 27467451 (-)
LOC110520201 NA coding upstream 110032 27485485 ~ 27486881 (-)
LOC110520206 herpud1 coding upstream 115091 27490544 ~ 27498055 (-)
G28024 NA non-coding downstream 21607 27351305 ~ 27351655 (-)
G27969 NA non-coding downstream 140732 27223487 ~ 27232530 (-)
G27481 NA non-coding downstream 235932 27137100 ~ 27137330 (-)
G27476 LOC106573708 non-coding downstream 238241 27132927 ~ 27135021 (-)
G28033 NA non-coding upstream 28401 27403854 ~ 27404723 (-)
G28074 NA non-coding upstream 129950 27505403 ~ 27506148 (-)
G28106 NA non-coding upstream 171073 27546526 ~ 27546794 (-)
mt2 NA non-coding upstream 175877 27551330 ~ 27552061 (-)
G25117 zfpm1 other downstream 2091244 25281604 ~ 25282018 (-)
G25115 zfpm1 other downstream 2092232 25280592 ~ 25281030 (-)
LOC110518671 klhl36 other downstream 2421875 24944908 ~ 24972465 (-)
LOC118956210 NA other downstream 2434561 24910984 ~ 24938701 (-)
znf276 znf276 other downstream 2508428 24853824 ~ 24865158 (-)
LOC110520292 gnao1 other upstream 260635 27631001 ~ 27781768 (-)
G28870 NA other upstream 681990 28057443 ~ 28066305 (-)
G29355 NA other upstream 1328434 28703887 ~ 28704356 (-)
G29906 mef2a other upstream 1904823 29280276 ~ 29280700 (-)
LOC110520932 LOC106573529 other upstream 3756440 31131151 ~ 31132900 (-)

Expression


Co-expression Network