mt2


Basic Information

Item Value
gene id mt2
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 27551330 ~ 27552061 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597409.2
ACACGGCACCTGTCTGCCCCGGACGATATAAATTCGAAGTCTCGCTAGTTAGAAATTAAAAGCTGACAACACACCACTGACACCCAGACAAACTACTACGATCCATTCGGATAAAGAAGGTAGCTCAAAAACTGGAAAATGGATCCTTGTGAATGCTCCAAAACTGGATCTTGCAACTGCGGTGGATCCTGCAAGTGCTCCAACTGCGCATGCACCAGTTGTAAGAAAGCAAGTTGCTGCGACTGCTGTCCCTCCGGCTGCAGCAAGTGTGCCTCAGGCTGCGTGTGCAAGGGCAAGACTTGTGATACCAGCTGTTGTCAGTGAGGCCTGTGTATGACATCACAATGCAGTCCATTCCCTATGACTATGAAGTTGTACCATCTTGAGCATAGCTTTTGTACCTTGTCAAATGTAAGGAAATAAATTGCATGTAACTTA
>TU32162
CGGCACCTGTCTGCCCCGGACGATATAAATTCGAAGTCTCGCTAGTTAGAAATTAAAAGCTGACAACACACCACTGACACCCAGACAAACTACTACGATCCATTCGGATAAAGAAGGTAGCTCAAAAACTGGAAAATGGATCCTTGTGAATGCTCCAAAACTGGATCTTGCAACTGCGGTGGATCCTGCAAGTGCTCCAACTGCGCATGCACCAGTTGTAAGAAAGCAAGTTGCTGCGACTGCTGTCCCTCCGGCTGCAGCAAGTGTGCCTCAGGCTGCGTGTGCAAGGGCAAGACTTGTGATACCAGCTGTTGTCAGTGAGGCCTGTGTATGACATCACAATGCAGTCCATTCCCTATGACTATGAAGTTGTACCATCTTGAGCATAGCTTTTGTACCTTGTCAAATGTAAGGAAATAAATTGCATGTAACTTATTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597409.2 False 438 mRNA 0.47 3 27551335 27552061
TU32162 True 440 lncRNA 0.46 3 27551330 27552058

Neighbor

gene id symbol gene type direction distance location
LOC110520211 nup93 coding downstream 6372 27507601 ~ 27544963 (-)
LOC110520206 herpud1 coding downstream 53280 27490544 ~ 27498055 (-)
LOC110520201 NA coding downstream 64454 27485485 ~ 27486881 (-)
LOC110520192 nlrc5 coding downstream 83884 27447044 ~ 27467451 (-)
LOC110520152 cpne2 coding downstream 105966 27405059 ~ 27445369 (-)
LOC110520267 LOC106573725 coding upstream 14295 27566356 ~ 27575092 (-)
LOC110520275 LOC106573726 coding upstream 23686 27575747 ~ 27610097 (-)
LOC110520292 gnao1 coding upstream 78940 27631001 ~ 27781768 (-)
LOC110520323 LOC106573733 coding upstream 298491 27850552 ~ 27978660 (-)
cfdp1 cfdp1 coding upstream 432788 27984849 ~ 28033545 (-)
G28106 NA non-coding downstream 4541 27546526 ~ 27546794 (-)
G28074 NA non-coding downstream 45187 27505403 ~ 27506148 (-)
G28033 NA non-coding downstream 146612 27403854 ~ 27404723 (-)
G28024 NA non-coding downstream 199680 27351305 ~ 27351655 (-)
G28112 NA non-coding upstream 9884 27561945 ~ 27562365 (-)
G28113 NA non-coding upstream 10446 27562507 ~ 27562707 (-)
G28143 NA non-coding upstream 77434 27629495 ~ 27629917 (-)
G28278 NA non-coding upstream 292172 27844233 ~ 27844580 (-)
G25117 zfpm1 other downstream 2269317 25281604 ~ 25282018 (-)
G25115 zfpm1 other downstream 2270305 25280592 ~ 25281030 (-)
LOC110518671 klhl36 other downstream 2599948 24944908 ~ 24972465 (-)
LOC118956210 NA other downstream 2612634 24910984 ~ 24938701 (-)
znf276 znf276 other downstream 2686501 24853824 ~ 24865158 (-)
G28870 NA other upstream 505382 28057443 ~ 28066305 (-)
G29355 NA other upstream 1151826 28703887 ~ 28704356 (-)
G29906 mef2a other upstream 1728215 29280276 ~ 29280700 (-)
LOC110520932 LOC106573529 other upstream 3579832 31131151 ~ 31132900 (-)

Expression


Co-expression Network