Item | Value |
---|---|
gene id | LOC110520482 |
gene name | edc4 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048565.1 |
NCBI id | CM023219.2 |
chromosome length | 95772356 |
location | 28346541 ~ 28385332 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
edc4 | Predicted to be involved in deadenylation-independent decapping of nuclear-transcribed mRNA. Predicted to be located in cytoplasm and nucleus. Predicted to be active in P-body. Orthologous to human EDC4 (enhancer of mRNA decapping 4). |
description |
---|
enhancer of mRNA-decapping protein 4 isoform X1 |
id | description |
---|---|
K12616 | EDC4; enhancer of mRNA-decapping protein 4 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021597842.2 | False | 5759 | mRNA | 0.51 | 29 | 28346541 | 28385332 |
XM_021597833.2 | False | 5782 | mRNA | 0.51 | 29 | 28346542 | 28385332 |
XM_021597852.2 | True | 5665 | mRNA | 0.51 | 29 | 28347039 | 28385332 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
nutf2 | nutf2 | coding | upstream | 180 | 28338300 ~ 28346361 (+) |
tsnaxip1 | tsnaxip1 | coding | upstream | 8146 | 28331968 ~ 28338395 (+) |
pard6a | pard6a | coding | upstream | 58453 | 28242570 ~ 28288088 (+) |
LOC110520354 | LOC106573739 | coding | upstream | 309250 | 28033707 ~ 28037291 (+) |
LOC110520308 | nudt21 | coding | upstream | 506284 | 27834798 ~ 27840257 (+) |
nrn1la | LOC106560823 | coding | downstream | 2636 | 28387968 ~ 28444370 (+) |
pskh1 | pskh1 | coding | downstream | 93548 | 28478880 ~ 28494053 (+) |
mbtps1 | LOC106573750 | coding | downstream | 115511 | 28500843 ~ 28526202 (+) |
LOC110532150 | LOC106560818 | coding | downstream | 145513 | 28530845 ~ 28534305 (+) |
pnp6 | LOC106573753 | coding | downstream | 352783 | 28738115 ~ 28742553 (+) |
G28480 | NA | non-coding | upstream | 138512 | 28158869 ~ 28208029 (+) |
G28487 | NA | non-coding | upstream | 158781 | 28167928 ~ 28187760 (+) |
G28473 | NA | non-coding | upstream | 192752 | 28152725 ~ 28153789 (+) |
G28423 | NA | non-coding | upstream | 277604 | 28063840 ~ 28068937 (+) |
G28636 | NA | non-coding | downstream | 111720 | 28497052 ~ 28497367 (+) |
G28638 | NA | non-coding | downstream | 114393 | 28499725 ~ 28499948 (+) |
G28653 | NA | non-coding | downstream | 149835 | 28535167 ~ 28610883 (+) |
G29227 | NA | non-coding | downstream | 291894 | 28677226 ~ 28677802 (+) |
G29229 | NA | non-coding | downstream | 294850 | 28680182 ~ 28680381 (+) |
G28416 | carmil2 | other | upstream | 298179 | 28047626 ~ 28048362 (+) |
G28285 | LOC106573733 | other | upstream | 491587 | 27853757 ~ 27854954 (+) |
G28280 | NA | other | upstream | 501530 | 27844640 ~ 27845011 (+) |
LOC110520258 | LOC106560847 | other | upstream | 781389 | 27560102 ~ 27565152 (+) |
G27553 | NA | other | upstream | 1030024 | 27257563 ~ 27316517 (+) |
LOC110520661 | LOC106573762 | other | downstream | 680324 | 28903691 ~ 29067795 (+) |
mef2aa | mef2a | other | downstream | 807397 | 29188958 ~ 29316547 (+) |
G33249 | NA | other | downstream | 3465141 | 31850473 ~ 31850969 (+) |
G33284 | NA | other | downstream | 3571198 | 31956530 ~ 31961547 (+) |
G33681 | LOC106573476 | other | downstream | 4065522 | 32450854 ~ 32452385 (+) |