pskh1 (pskh1)


Basic Information

Item Value
gene id pskh1
gene name pskh1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 28478880 ~ 28494053 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036975125.1
CTTATCTCCTCCTTTTCTAACATCTCTGCTTGTTTCTACCCGAGGTAACGCGGTTGCTAAACTAGTCGTCACGCAATGGAGTCGAGAAACCGGCCTATTTATCTCGAAAAATTGCCCCATTTTCATCAGTCCACTTCTGTGTGGAGAAGCTATTTTCTGAGTGGCCTGCCACACTGATTGCCATTGATAAAGTTGGTTCAGTGGGCCACTGCAGAATTTTGTCAAGAGCATTGGCTGTCTGCTGTGTCTTGATGCTCTTCAGTGCCTGGTTGTTACATGGGCGATGAGGATGTCCTGCTGGTCAGGATTGTGATGTGATGGGGTGCAGGACGAGCAAGGTCCTCCCTGAGCCACCTGGAGATGTCCAGCTAGACTTGGTCAAAAAGGTGGAGCCTCCTAAGACCGACATCTACAAACATTTCATCCGAGACGACGGCAGTGGGAGTAAAATGGGAGGGGAGAAAacaggctctctctctccacaagcCCAGGCAGCTTTCCCAGCTACCCAGGCATCCCCGGGTACAGGCCAACCAGAGGCCTCAGACCCACGCAGAAACAAGGTAGCCAAGTACAGAGCCAAGTTTGACCCACGGGTCACAGCCAAATATGACATTAAGGCCCTGATAGGTCGCGGTAGCTTCAGTCGGGTGGTGCGAGTGGAGCACAAGAGCACGCGTCAGCCCTACGCTATCAAGATGATCGAGACGCGTTATAGAGAGGGACGTGAGGTATGCGAGTCAGAGCTGTGTGTCCTGCGTCGTGTACGCCACACTAACATCATCCAGCTGATGGAGGTGTTTGAGACAGCTGAGAGAGTGTACATGGTGATGGAGCTGGCTACAGGAGGAGAGCTTTTTGACCGTATCATCGCCCGTGGCTCTTTCACAGAGCGTGATGCTACACGTGTCCTACAGATGGTACTGGACGGGGTCAAGTATCTACATACACTTGGCATCACCCACCGTGACCTCAAGCCTGAGAACCTGCTCTACTATCACCCTGGGGCGGACTCAAAAATTATGATCACTGACTTTGGGCTGGCCAGCACTCGTAAAAAGGGGGATGAGTGCTTGATGAAGACCACTTGTGGGACACCAGAGTACATTGCCCCAGAGATCCTGGTACGGAAGCCATACACTAATGCTGTAGACATGTGGGCTCTGGGTGTCATTTCCTACATTCTGCTGAGTGGAACCATGCCCTTTGAGGATGACAACCGCATGCGACTCTACCGCCAGATCCTCAAAGGGAAGTACAGCTTCTCTGGGGAGCCATGGCCCAGTGTGTCCAACCTGGCGAAGGACTTCATTGACCGTGTGCTGACAGTGGACCCCAGCGAGAGGTTGACTGCAGGCCAGGCTCTGAAGCACCCCTGGGTCGTCAGCATGGCTGCTTCATCCTCCATGAAGAACCTGCAGCGCTCTATCTCCCAGAACCTCCTGAAGAGGGCCTCGTCACGCTGCCACAGCACCAAGTCTGCCCAGTCCACACGCTCCAGCCGCTCCACCAAGTCCAACAAGGCTCGCCGTGCTCGGGAGAAAGAGCTGCGTGAGCTCAACCGCCGCTACCAACAACAATAAAATGGCTGAGTAATAGTTACATGGGCTGTAATTTTGACAAACTCGTAATGTTGCAGGTCTCATTGAGACCACAAGCAGGGACTTATCAGCAGCGGCCTAGAACAGCACTTCAGCTCAGCAATAACTTCAACATCCATCCTAGGCCATTGTGCCACTGAGGCAGTAAACAAAACATCCTCAGATTTCACTATTTTTCCTAGATTCCTATTTCCTCAAGTTTCTTTCCTGTCCTTGTGTGTCTCctcatatttatttattgttgTCATGATTATATTGTTTCCGTAGAAATGGTCACTTGAAGCTGTCCATCTAAACGGATCTGTTGAACAGAATTCAAGGTAATGAAGGTTTAGGAAGGGATgttgaaatgcttttccaacactgATTCCTGATTATTTGCTGTGAATTTATTATGTTACAAGAACAGTGAGTTACTTGGTTTGGTGGAGATCTATATCTGATTATATCTTGATTTGGACAAAAAATACATGATACTTTGTGTTAAAACACAAGTATGTCAATGAAGGCCAAAATAAACATTGATTTATTTAATTTTGGTTTAGAAGTCGTATATCCAATCTTATTGTATCCCGACCAGTTGCTTTCATGGATTGCAAATTAAGTCTCTTCCTTGCCAGGATTCAGTTTTTACAACCTGTCCATTCATGATTTTTTCCCCAATTCGTTCTGGGATTCTTTTTTAACTGTGAGCTTGAAAGGCTGAGGGAGGTTGACTGGAAACTAAATAAGGACGGATGATCCAGCGCTTTTGCATCTGTCGTCGTGAGGATTGATTAGGCTGAAACCTAGTCCTGTCTCTGCACTCTCCTGCTCCTGCTGTCTGAGATGGACAGCATTGTTGTAATGAAGTATACACGTCAAGTGATGTGTAATTTAACAAACTGATGGAGAATGGATCAAATAAATGTCTAACTGATGGAGAATAGTCCAATGGTTGAAAGCTCAGTATTCATTTAATTTGTTGTATCAAATATTTCTTTCCAATTTGTTCTGAGTAATGCAGACATCTCATGTTTgtactgtattttttattttttcaaaatatTTTTATTGAACAAACCGTGTAGTTTGACAACAACTAAATTTGTGCTGTGGTGGATGCTTTGCCAGTCGTAAAGCCCACAGACGGCTGTTGGGAGGAGAGACCAATTCAAATCTGACCTTTCTGCACTATTGTCAAGTCTTAATCAAGAAAAATGACCATAAAATGATAGGATTGAAAATAAATCTTATAACTATTGCTTTAGTCTTTTAAATGGAACTCTTCAATGTTTCAGAGATTTTATTATTTTGGGTGTACCTTGTTATAGCCTGTGAATGCACATATTTAAGTGGTGGTTCAAGGGACTGATCTCATTTAACCCACAGTACCATTTTGAGGGGTCATCCAATAGTGTTTTGAAGGGATTAAACAAAATACTTATACCTCTGTTTTTTGTTGACAGGCTTAATTGTAGGTTTTGTATATTAATTACACATGCTCTTGTTAGTTAGCTCCTTTTGTAGTAATCTTTTTGTACTCCCCAACCAAGACACCCATAGTAAGTGATCCGTTTGATTTTGTCATATAGACTATGTATTTTTGAGCAATTTCCTGGTGAGAAGCGCTGGTATTTTAAAGTGAATTTTTCAAAGATACTGGAAATCCAACAGAGCCGTATCAGCTTACCTCAATCTCTCATTTGGTAATTCTATAATGTTACATTATTTTCCATCTTCACTCAATCGGTCCTACTGCTGTTATTGTTTTT
>XM_021597876.2
GCCGAGGAGGTCGTACTTACAAAGAAGTTTACAGGGGAAAAAGGTGGTcccacaaaaaaaacagttttatgaAGCAAACTACCGAGCACTTCAATCTGCTGTTTTGCCACCGCCTTTACCCGCGAAATAAAGCCATAAACTTGTTTCAATTTACTCCGAATGTTATCAGAGACAGCATACTGCTCAATCGTCTATGTTTATTATCAACTGGATTCAACTTTGAAAAATCCGAACCAAAAAAATGGAGAGAACAGCTGAGTCCTGTTGTGGAGTCTTGCTGTcgtgtgtagctagctagctaacttggaTATAGCTACGAATTGCCCCATTTTCATCAGTCCACTTCTGTGTGGAGAAGCTATTTTCTGAGTGGCCTGCCACACTGATTGCCATTGATAAAGTTGGTTCAGTGGGCCACTGCAGAATTTTGTCAAGAGCATTGGCTGTCTGCTGTGTCTTGATGCTCTTCAGTGCCTGGTTGTTACATGGGCGATGAGGATGTCCTGCTGGTCAGGATTGTGATGTGATGGGGTGCAGGACGAGCAAGGTCCTCCCTGAGCCACCTGGAGATGTCCAGCTAGACTTGGTCAAAAAGGTGGAGCCTCCTAAGACCGACATCTACAAACATTTCATCCGAGACGACGGCAGTGGGAGTAAAATGGGAGGGGAGAAAacaggctctctctctccacaagcCCAGGCAGCTTTCCCAGCTACCCAGGCATCCCCGGGTACAGGCCAACCAGAGGCCTCAGACCCACGCAGAAACAAGGTAGCCAAGTACAGAGCCAAGTTTGACCCACGGGTCACAGCCAAATATGACATTAAGGCCCTGATAGGTCGCGGTAGCTTCAGTCGGGTGGTGCGAGTGGAGCACAAGAGCACGCGTCAGCCCTACGCTATCAAGATGATCGAGACGCGTTATAGAGAGGGACGTGAGGTATGCGAGTCAGAGCTGTGTGTCCTGCGTCGTGTACGCCACACTAACATCATCCAGCTGATGGAGGTGTTTGAGACAGCTGAGAGAGTGTACATGGTGATGGAGCTGGCTACAGGAGGAGAGCTTTTTGACCGTATCATCGCCCGTGGCTCTTTCACAGAGCGTGATGCTACACGTGTCCTACAGATGGTACTGGACGGGGTCAAGTATCTACATACACTTGGCATCACCCACCGTGACCTCAAGCCTGAGAACCTGCTCTACTATCACCCTGGGGCGGACTCAAAAATTATGATCACTGACTTTGGGCTGGCCAGCACTCGTAAAAAGGGGGATGAGTGCTTGATGAAGACCACTTGTGGGACACCAGAGTACATTGCCCCAGAGATCCTGGTACGGAAGCCATACACTAATGCTGTAGACATGTGGGCTCTGGGTGTCATTTCCTACATTCTGCTGAGTGGAACCATGCCCTTTGAGGATGACAACCGCATGCGACTCTACCGCCAGATCCTCAAAGGGAAGTACAGCTTCTCTGGGGAGCCATGGCCCAGTGTGTCCAACCTGGCGAAGGACTTCATTGACCGTGTGCTGACAGTGGACCCCAGCGAGAGGTTGACTGCAGGCCAGGCTCTGAAGCACCCCTGGGTCGTCAGCATGGCTGCTTCATCCTCCATGAAGAACCTGCAGCGCTCTATCTCCCAGAACCTCCTGAAGAGGGCCTCGTCACGCTGCCACAGCACCAAGTCTGCCCAGTCCACACGCTCCAGCCGCTCCACCAAGTCCAACAAGGCTCGCCGTGCTCGGGAGAAAGAGCTGCGTGAGCTCAACCGCCGCTACCAACAACAATAAAATGGCTGAGTAATAGTTACATGGGCTGTAATTTTGACAAACTCGTAATGTTGCAGGTCTCATTGAGACCACAAGCAGGGACTTATCAGCAGCGGCCTAGAACAGCACTTCAGCTCAGCAATAACTTCAACATCCATCCTAGGCCATTGTGCCACTGAGGCAGTAAACAAAACATCCTCAGATTTCACTATTTTTCCTAGATTCCTATTTCCTCAAGTTTCTTTCCTGTCCTTGTGTGTCTCctcatatttatttattgttgTCATGATTATATTGTTTCCGTAGAAATGGTCACTTGAAGCTGTCCATCTAAACGGATCTGTTGAACAGAATTCAAGGTAATGAAGGTTTAGGAAGGGATgttgaaatgcttttccaacactgATTCCTGATTATTTGCTGTGAATTTATTATGTTACAAGAACAGTGAGTTACTTGGTTTGGTGGAGATCTATATCTGATTATATCTTGATTTGGACAAAAAATACATGATACTTTGTGTTAAAACACAAGTATGTCAATGAAGGCCAAAATAAACATTGATTTATTTAATTTTGGTTTAGAAGTCGTATATCCAATCTTATTGTATCCCGACCAGTTGCTTTCATGGATTGCAAATTAAGTCTCTTCCTTGCCAGGATTCAGTTTTTACAACCTGTCCATTCATGATTTTTTCCCCAATTCGTTCTGGGATTCTTTTTTAACTGTGAGCTTGAAAGGCTGAGGGAGGTTGACTGGAAACTAAATAAGGACGGATGATCCAGCGCTTTTGCATCTGTCGTCGTGAGGATTGATTAGGCTGAAACCTAGTCCTGTCTCTGCACTCTCCTGCTCCTGCTGTCTGAGATGGACAGCATTGTTGTAATGAAGTATACACGTCAAGTGATGTGTAATTTAACAAACTGATGGAGAATGGATCAAATAAATGTCTAACTGATGGAGAATAGTCCAATGGTTGAAAGCTCAGTATTCATTTAATTTGTTGTATCAAATATTTCTTTCCAATTTGTTCTGAGTAATGCAGACATCTCATGTTTgtactgtattttttattttttcaaaatatTTTTATTGAACAAACCGTGTAGTTTGACAACAACTAAATTTGTGCTGTGGTGGATGCTTTGCCAGTCGTAAAGCCCACAGACGGCTGTTGGGAGGAGAGACCAATTCAAATCTGACCTTTCTGCACTATTGTCAAGTCTTAATCAAGAAAAATGACCATAAAATGATAGGATTGAAAATAAATCTTATAACTATTGCTTTAGTCTTTTAAATGGAACTCTTCAATGTTTCAGAGATTTTATTATTTTGGGTGTACCTTGTTATAGCCTGTGAATGCACATATTTAAGTGGTGGTTCAAGGGACTGATCTCATTTAACCCACAGTACCATTTTGAGGGGTCATCCAATAGTGTTTTGAAGGGATTAAACAAAATACTTATACCTCTGTTTTTTGTTGACAGGCTTAATTGTAGGTTTTGTATATTAATTACACATGCTCTTGTTAGTTAGCTCCTTTTGTAGTAATCTTTTTGTACTCCCCAACCAAGACACCCATAGTAAGTGATCCGTTTGATTTTGTCATATAGACTATGTATTTTTGAGCAATTTCCTGGTGAGAAGCGCTGGTATTTTAAAGTGAATTTTTCAAAGATACTGGAAATCCAACAGAGCCGTATCAGCTTACCTCAATCTCTCATTTGGTAATTCTATAATGTTACATTATTTTCCATCTTCACTCAATCGGTCCTACTGCTGTTATTGTTTTT

Function

symbol description
pskh1 Predicted to enable ATP binding activity; protein serine kinase activity; and protein threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human PSKH1 (protein serine kinase H1).

NR:

description
serine/threonine-protein kinase H1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K08808 PSKH; protein serine kinase H

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036975125.1 False 3355 mRNA 0.45 3 28478880 28494053
XM_021597876.2 True 3564 mRNA 0.44 3 28480906 28494053

Neighbor

gene id symbol gene type direction distance location
nrn1la LOC106560823 coding upstream 34510 28387968 ~ 28444370 (+)
LOC110520482 edc4 coding upstream 93548 28346541 ~ 28385332 (+)
nutf2 nutf2 coding upstream 132519 28338300 ~ 28346361 (+)
tsnaxip1 tsnaxip1 coding upstream 140485 28331968 ~ 28338395 (+)
pard6a pard6a coding upstream 190792 28242570 ~ 28288088 (+)
mbtps1 LOC106573750 coding downstream 6790 28500843 ~ 28526202 (+)
LOC110532150 LOC106560818 coding downstream 36792 28530845 ~ 28534305 (+)
pnp6 LOC106573753 coding downstream 244062 28738115 ~ 28742553 (+)
LOC110520547 LOC106573754 coding downstream 255829 28749882 ~ 28763697 (+)
LOC110520559 LOC106573756 coding downstream 275915 28769968 ~ 28778739 (+)
G28480 NA non-coding upstream 270851 28158869 ~ 28208029 (+)
G28487 NA non-coding upstream 291120 28167928 ~ 28187760 (+)
G28473 NA non-coding upstream 325091 28152725 ~ 28153789 (+)
G28423 NA non-coding upstream 409943 28063840 ~ 28068937 (+)
LOC110520354 LOC106573739 non-coding upstream 441630 28033707 ~ 28037291 (+)
G28636 NA non-coding downstream 2999 28497052 ~ 28497367 (+)
G28638 NA non-coding downstream 5672 28499725 ~ 28499948 (+)
G28653 NA non-coding downstream 41114 28535167 ~ 28610883 (+)
G29227 NA non-coding downstream 183173 28677226 ~ 28677802 (+)
G29229 NA non-coding downstream 186129 28680182 ~ 28680381 (+)
G28416 carmil2 other upstream 430518 28047626 ~ 28048362 (+)
G28285 LOC106573733 other upstream 623926 27853757 ~ 27854954 (+)
G28280 NA other upstream 633869 27844640 ~ 27845011 (+)
LOC110520258 LOC106560847 other upstream 913728 27560102 ~ 27565152 (+)
G27553 NA other upstream 1162363 27257563 ~ 27316517 (+)
LOC110520661 LOC106573762 other downstream 571603 28903691 ~ 29067795 (+)
mef2aa mef2a other downstream 698676 29188958 ~ 29316547 (+)
G33249 NA other downstream 3356420 31850473 ~ 31850969 (+)
G33284 NA other downstream 3462477 31956530 ~ 31961547 (+)
G33681 LOC106573476 other downstream 3956801 32450854 ~ 32452385 (+)

Expression


Co-expression Network