pnp6 (LOC106573753)


Basic Information

Item Value
gene id pnp6
gene name LOC106573753
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 28738115 ~ 28742553 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597929.1
AGGATCCTTTCAGTTCCCTATGTTGTCAACGGCTAGCCCGCTGTCAGTGTCAGTCCTCAAGGTTTATTGCGCGGGTCAGTGAGCGCCCCAGTCTGTTAGACAATTGGATTAGAACAACGAGACCTTTCAAAGGAACCGCAAGTCCAACGACTCCTCCTCCGTCACGCCACCCTCCCATCACTGACCTTGTCCTACGAGTACTGTTTGTCGCTAAACGCTGTGGCTGACGAACAAATCTACTGTAGCTTTACCTCATCATCAGTAATGAACAAGTCATCCTCAAACAAATGCAGTTACACATATGAGGATTATAGGGAAACAGCTGATTGGTTGCTGTCCCAAACTGAGCAGAGGCCTAAAGTAGCCATCATCTGTGGCTCTGGCCTGGGCGGCCTGGCTGACCTGCTGGACAACAAGACTGTGTTTCCCTACAAGGACATCCCATGCTTCCCCAACAGCACAGTACAAGGACATGCCAGTCAGCTGGTCTTTGGGGAGCTGCAGGGGAAGCAGTGTGTCTGCATGCAGGGCCGCTTCCACTTCTACGAAGGCTACAACATTGCCACAGTGACATACCCGGTGCGAGTGTTCTTCCTGCTCGGGGTGGAGACCCTGATTGTCACTAATGCTGCTGGGGGGCTGAACCCCAACTTTAAAGTCGGTGACATCATGCTGATCAAGGATCACATCAACATGCCAGGCTTTGCAGGCCAAAACCCACTGTGTGGTCACAACGATGAAAGGTTTGGAGTCCGTTTTCCCTGCATGTCGGACGCCTATGACAAAGACCTTTCTATACTGGCCAAAGAGACTGCTGAGGAGCAGGGCTGTTCCTCCTTCATCCAGCAAGGCGTGTACTGCATGCTGGCAGGTCCCAACTTTGAGACCATCGCAGAGTGCAGAGCTCTCCAGAAACTAGGCGCAGATGCTGTGGGTATGAGTACAGTCCCTGAGGTGGTGGTGGCTCGTCACTGTGGTCTTCGTGTCTTTGGCCTGTCTCTCATCACCAACAAGGTGGTCACAGACTACGACAGCCAGGAGAAGGCCAACCATGAGGAGGTACTGGATACCACAAGAATGCGCACTCAGGACCTACAGAGGCTGATCAGTAACCTGCTGGCTAAGATGTAGATCAGCCCCAGTCTGGCTGTGTTAACTGCCCAGGAACATAGCTACTGTAAGGTGATGTTATACAGAAAGCACAGATGCATATATTCTATAGAAATAGCTAGCAGACAGATCATTGCAATCATATGATATACGTAATTTGAAGGAAAGGCTAGATAGCTTTAAATGATGTCTTATTTGTTTACATTTCTAAGCACAGAGGCTAATGCTAGTATTGCTACTTCAGTTTGATTTGACATCTTATAGGCTAGGGTTTGTCTTCATTGTGTAATCTCTAAACTGAAGCACTGTAAAGAGGCATACTAACCAAACTCACCTCTTCAAAAAGGGGTTGTCCATATGGCTATAAAGTAATGTAATACTTGAAAATAATATATTCCTTTGAATTAAAACAAAACTGAAAATGCATCACA

Function

NR:

description
purine nucleoside phosphorylase-like

GO:

id name namespace
GO:0009116 nucleoside metabolic process biological_process
GO:0004731 purine-nucleoside phosphorylase activity molecular_function

KEGG:

id description
K03783 punA, PNP; purine-nucleoside phosphorylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597929.1 True 1541 mRNA 0.48 6 28738115 28742553

Neighbor

gene id symbol gene type direction distance location
LOC110532150 LOC106560818 coding upstream 203810 28530845 ~ 28534305 (+)
mbtps1 LOC106573750 coding upstream 211913 28500843 ~ 28526202 (+)
pskh1 pskh1 coding upstream 244062 28478880 ~ 28494053 (+)
nrn1la LOC106560823 coding upstream 293745 28387968 ~ 28444370 (+)
LOC110520482 edc4 coding upstream 352783 28346541 ~ 28385332 (+)
LOC110520547 LOC106573754 coding downstream 7329 28749882 ~ 28763697 (+)
LOC110520559 LOC106573756 coding downstream 27415 28769968 ~ 28778739 (+)
LOC110520570 LOC106573757 coding downstream 39344 28781897 ~ 28786756 (+)
LOC110520650 LOC106573761 coding downstream 100039 28842592 ~ 28844660 (+)
LOC110520598 LOC106573760 coding downstream 102181 28844734 ~ 28860495 (+)
G29275 NA non-coding upstream 380 28737464 ~ 28737735 (+)
G29269 NA non-coding upstream 7888 28728101 ~ 28730227 (+)
G29262 NA non-coding upstream 20662 28717221 ~ 28717453 (+)
G29257 NA non-coding upstream 24240 28713383 ~ 28713875 (+)
G29256 NA non-coding upstream 25899 28711950 ~ 28712216 (+)
G29223 NA non-coding downstream 1335 28743888 ~ 28747658 (+)
G29288 NA non-coding downstream 38205 28780758 ~ 28781315 (+)
G29291 NA non-coding downstream 44678 28787231 ~ 28787472 (+)
G29296 NA non-coding downstream 51620 28794173 ~ 28796143 (+)
G29320 NA non-coding downstream 91008 28833561 ~ 28835039 (+)
G28416 carmil2 other upstream 689753 28047626 ~ 28048362 (+)
G28285 LOC106573733 other upstream 883161 27853757 ~ 27854954 (+)
G28280 NA other upstream 893104 27844640 ~ 27845011 (+)
LOC110520258 LOC106560847 other upstream 1172963 27560102 ~ 27565152 (+)
G27553 NA other upstream 1421598 27257563 ~ 27316517 (+)
LOC110520661 LOC106573762 other downstream 323103 28903691 ~ 29067795 (+)
mef2aa mef2a other downstream 450176 29188958 ~ 29316547 (+)
G33249 NA other downstream 3107920 31850473 ~ 31850969 (+)
G33284 NA other downstream 3213977 31956530 ~ 31961547 (+)
G33681 LOC106573476 other downstream 3708301 32450854 ~ 32452385 (+)

Expression


Co-expression Network