Gene
RNA
| Item | Value |
|---|---|
| gene id | rgma |
| gene name | LOC106573775 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 30284628 ~ 30300184 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| repulsive guidance molecule A-like |
| id | description |
|---|---|
| K23096 | RGMA; repulsive guidance molecule A |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021598238.2 | False | 4037 | mRNA | 0.47 | 4 | 30284628 | 30300184 |
| XM_036975431.1 | True | 4007 | mRNA | 0.47 | 5 | 30284628 | 30300184 |
30,272,000
30,274,000
30,276,000
30,278,000
30,280,000
30,282,000
30,284,000
30,286,000
30,288,000
30,290,000
30,292,000
30,294,000
30,296,000
30,298,000
30,300,000
30,302,000
30,304,000
30,306,000
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lysmd4 | LOC106573773 | coding | upstream | 201234 | 30063194 ~ 30083394 (+) |
| LOC110520750 | NA | coding | upstream | 794423 | 29466009 ~ 29490205 (+) |
| mctp2a | LOC106573768 | coding | upstream | 923065 | 29321672 ~ 29361563 (+) |
| mef2aa | mef2a | coding | upstream | 968086 | 29188958 ~ 29316547 (+) |
| LOC110520673 | LOC106573765 | coding | upstream | 1199898 | 29074355 ~ 29084730 (+) |
| fam174b | LOC106573778 | coding | downstream | 59582 | 30359766 ~ 30366602 (+) |
| LOC110532168 | LOC106573811 | coding | downstream | 171928 | 30472112 ~ 30500532 (+) |
| gnrhr4 | LOC106573532 | coding | downstream | 344546 | 30644730 ~ 30649046 (+) |
| LOC110520933 | LOC106573504 | coding | downstream | 837387 | 31137571 ~ 31292478 (+) |
| LOC110520934 | LOC106573503 | coding | downstream | 1022838 | 31323022 ~ 31343011 (+) |
| G31216 | NA | non-coding | upstream | 66868 | 30217317 ~ 30217760 (+) |
| G31214 | NA | non-coding | upstream | 68746 | 30215632 ~ 30215882 (+) |
| G31197 | NA | non-coding | upstream | 81510 | 30202843 ~ 30203118 (+) |
| G31193 | NA | non-coding | upstream | 84510 | 30199889 ~ 30200118 (+) |
| G30905 | NA | non-coding | upstream | 282237 | 30002160 ~ 30002391 (+) |
| G31204 | LOC106573776 | non-coding | downstream | 6924 | 30307108 ~ 30311701 (+) |
| G31198 | NA | non-coding | downstream | 29694 | 30329878 ~ 30350038 (+) |
| G31276 | NA | non-coding | downstream | 54024 | 30354208 ~ 30354433 (+) |
| G31277 | NA | non-coding | downstream | 55910 | 30356094 ~ 30356365 (+) |
| G31278 | NA | non-coding | downstream | 58291 | 30358475 ~ 30358796 (+) |
| LOC110520661 | LOC106573762 | other | upstream | 1216833 | 28903691 ~ 29067795 (+) |
| G28416 | carmil2 | other | upstream | 2236266 | 28047626 ~ 28048362 (+) |
| G28285 | LOC106573733 | other | upstream | 2429674 | 27853757 ~ 27854954 (+) |
| G28280 | NA | other | upstream | 2439617 | 27844640 ~ 27845011 (+) |
| G33249 | NA | other | downstream | 1550289 | 31850473 ~ 31850969 (+) |
| G33284 | NA | other | downstream | 1656346 | 31956530 ~ 31961547 (+) |
| G33681 | LOC106573476 | other | downstream | 2150670 | 32450854 ~ 32452385 (+) |
| G33768 | NA | other | downstream | 2312889 | 32613073 ~ 32617684 (+) |
| sema3e | LOC106573450 | other | downstream | 3022583 | 33268524 ~ 33326523 (+) |
