LOC110521366 (LOC106573474)


Basic Information

Item Value
gene id LOC110521366
gene name LOC106573474
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 32218758 ~ 32270230 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021598873.2
ATTTTGAATTGAGGGATGGTTTATGATTACATGGGTTGTGGTCGTATATTCTGATCTTGGTTGAATTTGCAATTCAATGAGTTATTAAGCTAATACACTCTATGAGACACAGTGTGTAGTCATTATAGTACTGAGGCCTGTCTTGTCTTGAAAGTGTTGCTTACTGGCTCCTGTTCCACAGAAAGTATGTGGTAAACCTAGAAAAACCTGTTCGGTTTTCAGAAATGTATTACCCTCAGATCACATCAGATGATAATAATATCTAGTTTGTGCCACACACATGTTGCTGTGATTGTTTTTCCCTTCAAACGTATAACAAGATTAAAAGGTGTGGAAGTGCATACATTGTTGATTATTAGTATATAAAGGGAAATCCACTCGACTCAATCTAGCACTCAATGTCTCACATAGGTCATCAGGGCCATCCTAGGAACATTGGGTCTCTCTCCTAACACTTGACTACTTAAAAAGGGAAAATAAGATCTCGCGCCACAGAATAAGACAGAACTACGCCCAAGACAGCAGTCCCTAAGATCTTATTGGTGGAAAGCATTCATGGAAACTGCATTATGGGGCAGCGCGATGAAGTCATTAAGAAGCTTACAGACGTTCTGCCAGATTAGATGTTGCTCTCCTAATCCTACAGATTACAGTCACGCAAGCCTGCTGACCGAGTGTGCTTTGTTGTGTTGTACAATTTCTTTGCATTGATAATTTCTTGTTGCTCCTAACTCTCTGGAATATATAGGCTATCAAGGAGTAACAGGATTGAGAGGAGGTTAAGGTGAGACTGTATAGCTCTAGTTGATAAAACAAGGCACTGGTAAAATCTATTGATGCAACCGGGATTCAGTCTAGTTATGGATGTTTTTAAATTGGATTTAACAACAGTTTATGTGAATGTTTGGTTTTCATAAAAACTACAGACTGTCTCTAATGGATGAAGGCACATCTCAGCTGTAACTAGACCGAGCAACTGCTTCCACACTACAGAACCAACCAGCCAGGCAGGCCGTGTGGGGAGAGATAGGTGGAGAAGGATCATCTCTTTGGGAGGCTTTCACAGATGGTGTCCCTTGCTCCCTGTAGTGATATGGAGACAGAACCCTGCCCTGGAATGCAAGAGAAGCGGGTGGTGGAGACCAATGAGCCAGTGTTGAAGAAGGCCTACACAGTCCCTGGTGACAATGAAAGTCAGGAGGAGAAAGAACTGTTCCATGGGCTTCAGCAGGAAGACAAGGAACCCCATGGGGAGGGAGACCCCAGGATAAACAGCcagggtggagggaaggagggcactACGTTAAACCAGCTCCCTATGTCTGAGATTACAGAGATCCCCTGTGTGGAAGAGAGGAAGCTGAAGACCCCCAGTTTTGTGAAGACAGTGCGGTTCAGTGAGACAGAGTctgtggaggacagagagaactcGGAGGAGGTGCTCTTCCCTGACCATGAGATGGTGCAGTGGACCTCCTCCAGCTTCGAGGAGCTGTTCCTGGCTGAGGACTGGGAGAACATCACAGATGATCGGCTGTTGAGGAAGAAGGTGCTGGTGCCTGGCCCCCAGCAAGCTGAGCACCCAGCCTGGGGTCAGGAGGTCACAGTCAAAATGCAGGGAGTGCTGGAGGACAGGACTGTGGTGGAGAAGGACCCTAAACTGGTGTTCGTCATCGGAGAGGGAGATGTAAACCAGGCCCTGGAGGAGTGTGCCATATCCATGCAGCAGGACGAGATCGCATTACTGCTGGCAGATTCACAGTACACCTATGGACTTCTGGGAAGGGAGACAGATATTCCAGCCTGGGCCCCCTTACTCTACCAGCTGCAGCTCCTGGACATCAGAGAGAAGCCCGACCCTCTGATTCTCCCCATTTCGGACCGTATGCGCATCGGAAACCAGAAACGAGAGCGTGGGAACTTCCACTTCCAGAGGGAGGAGTACAGCATGGCTGCCAGAGCCTACTGGATGGCTCTTGATGTCCTTACTACACATAATAGAGATGGTAGTAGTGATGTGCtgttggagggggaggaggaggaggtgcaggACTACCGGGTGAAGTGTCTGAACAACCTGGCAGCAGCTCAGCTGAAATTGGAGCAGTACGATGACGCACTACACACCAGCCGGGATGTTCTGTCCCTTGATCCACAAAACGTCAAAGCCCTCTTCAGGACAGGAAAGCTTCTGTCAGACAAGAGCGAGTACCAGGAGGCAATGGAGATACTGAAGAAGGCCCTGAAACTGGAGCCGTCCACTAAGGCCATCCATGTTGAGTTGTCCAAGCTAGTGAAAAGGCAATCAGGAGGCAAAGATACCCAGAAGTGGCAAGCCAAACCTGCCCAGCTCCTCGGAGACAATATTGCCCCATTTCTGACTCCTTCTAAAAAGAAGCCACCTGGAATTTCATGGACTTTCCTGCTTGGTGCTCTGGTGGTGGCCTTGGGCAGTTTAGTGACGTCAGTGGTTCTCACTGCAAGAAACTGACATCCTCTACAAAGGAACTGTCCTCTACACAAGTCCAGCTCATGAATACTAAACTGAGTTGTCTACTGTGAATAAAATAAAGATTGCACTGAACAATAAAAACAACATTTGCACCCCAGATTGTGTTTGAATGTAACAGAGTAAACTAATGGCACTTTAATTTTTTTGAACAATGAACACAAAATAGCTTTGTGTTGTAATCGTTTAGTACAGTTATTAGCTAATAAATGTCACCAATTCCATAGAAAAATGCCCAAATTCCAAAACTCATTCTGGAATAGTCACATGGTCAATGTTCCTCCACAAAAGATTGAAGAGAGCAGTATTCTCGTGTTACAGCTTTTAAATGTATTGTATGGGGTTTCTGCAATAACAGGTTGTGTCCAAATGAATAATCTATGTCAATGGAAAATCTAATAAAAACACTTGTAGGCTTACTGTCCGTTGATACAGAAACAACATCAATAAAGCTGCAT
>XM_021598882.2
ATTTTGAATTGAGGGATGGTTTATGATTACATGGGTTGTGGTCGTATATTCTGATCTTGGTTGAATTTGCAATTCAATGAGTTATTAAGCTAATACACTCTATGAGACACAGTGTGTAGTCATTATAGTACTGAGGCCTGTCTTGTCTTGAAAGTGTTGCTTACTGGCTCCTGTTCCACAGAAAGTATGTGGTAAACCTAGAAAAACCTGTTCGGTTTTCAGAAATGTATTACCCTCAGATCACATCAGATGATAATAATATCTAGTTTGTGCCACACACATGTTGCTGTGATTGTTTTTCCCTTCAAACGTATAACAAGATTAAAAGGTGTGGAAGTGCATACATTGTTGATTATTAGTATATAAAGGGAAATCCACTCGACTCAATCTAGCACTCAATGTCTCACATAGGTCATCAGGGCCATCCTAGGAACATTGGGTCTCTCTCCTAACACTTGACTACTTAAAAAGGGAAAATAAGATCTCGCGCCACAGAATAAGACAGAACTACGCCCAAGACAGCAGTCCCTAAGATCTTATTGGTGGAAAGCATTCATGGAAACTGCATTATGGGGCAGCGCGATGAAGTCATTAAGAAGCTTACAGACGTTCTGCCAGATTAGATGTTGCTCTCCTAATCCTACAGATTACAGTCACGCAAGCCTGCTGACCGAGTGTGCTTTGTTGTGTTGTACAATTTCTTTGCATTGATAATTTCTTGTTGCTCCTAACTCTCTGGAATATATAGGCTATCAAGGAGTAACAGGATTGAGAGGAGGTTAAGACTGTCTCTAATGGATGAAGGCACATCTCAGCTGTAACTAGACCGAGCAACTGCTTCCACACTACAGAACCAACCAGCCAGGCAGGCCGTGTGGGGAGAGATAGGTGGAGAAGGATCATCTCTTTGGGAGGCTTTCACAGATGGTGTCCCTTGCTCCCTGTAGTGATATGGAGACAGAACCCTGCCCTGGAATGCAAGAGAAGCGGGTGGTGGAGACCAATGAGCCAGTGTTGAAGAAGGCCTACACAGTCCCTGGTGACAATGAAAGTCAGGAGGAGAAAGAACTGTTCCATGGGCTTCAGCAGGAAGACAAGGAACCCCATGGGGAGGGAGACCCCAGGATAAACAGCcagggtggagggaaggagggcactACGTTAAACCAGCTCCCTATGTCTGAGATTACAGAGATCCCCTGTGTGGAAGAGAGGAAGCTGAAGACCCCCAGTTTTGTGAAGACAGTGCGGTTCAGTGAGACAGAGTctgtggaggacagagagaactcGGAGGAGGTGCTCTTCCCTGACCATGAGATGGTGCAGTGGACCTCCTCCAGCTTCGAGGAGCTGTTCCTGGCTGAGGACTGGGAGAACATCACAGATGATCGGCTGTTGAGGAAGAAGGTGCTGGTGCCTGGCCCCCAGCAAGCTGAGCACCCAGCCTGGGGTCAGGAGGTCACAGTCAAAATGCAGGGAGTGCTGGAGGACAGGACTGTGGTGGAGAAGGACCCTAAACTGGTGTTCGTCATCGGAGAGGGAGATGTAAACCAGGCCCTGGAGGAGTGTGCCATATCCATGCAGCAGGACGAGATCGCATTACTGCTGGCAGATTCACAGTACACCTATGGACTTCTGGGAAGGGAGACAGATATTCCAGCCTGGGCCCCCTTACTCTACCAGCTGCAGCTCCTGGACATCAGAGAGAAGCCCGACCCTCTGATTCTCCCCATTTCGGACCGTATGCGCATCGGAAACCAGAAACGAGAGCGTGGGAACTTCCACTTCCAGAGGGAGGAGTACAGCATGGCTGCCAGAGCCTACTGGATGGCTCTTGATGTCCTTACTACACATAATAGAGATGGTAGTAGTGATGTGCtgttggagggggaggaggaggaggtgcaggACTACCGGGTGAAGTGTCTGAACAACCTGGCAGCAGCTCAGCTGAAATTGGAGCAGTACGATGACGCACTACACACCAGCCGGGATGTTCTGTCCCTTGATCCACAAAACGTCAAAGCCCTCTTCAGGACAGGAAAGCTTCTGTCAGACAAGAGCGAGTACCAGGAGGCAATGGAGATACTGAAGAAGGCCCTGAAACTGGAGCCGTCCACTAAGGCCATCCATGTTGAGTTGTCCAAGCTAGTGAAAAGGCAATCAGGAGGCAAAGATACCCAGAAGTGGCAAGCCAAACCTGCCCAGCTCCTCGGAGACAATATTGCCCCATTTCTGACTCCTTCTAAAAAGAAGCCACCTGGAATTTCATGGACTTTCCTGCTTGGTGCTCTGGTGGTGGCCTTGGGCAGTTTAGTGACGTCAGTGGTTCTCACTGCAAGAAACTGACATCCTCTACAAAGGAACTGTCCTCTACACAAGTCCAGCTCATGAATACTAAACTGAGTTGTCTACTGTGAATAAAATAAAGATTGCACTGAACAATAAAAACAACATTTGCACCCCAGATTGTGTTTGAATGTAACAGAGTAAACTAATGGCACTTTAATTTTTTTGAACAATGAACACAAAATAGCTTTGTGTTGTAATCGTTTAGTACAGTTATTAGCTAATAAATGTCACCAATTCCATAGAAAAATGCCCAAATTCCAAAACTCATTCTGGAATAGTCACATGGTCAATGTTCCTCCACAAAAGATTGAAGAGAGCAGTATTCTCGTGTTACAGCTTTTAAATGTATTGTATGGGGTTTCTGCAATAACAGGTTGTGTCCAAATGAATAATCTATGTCAATGGAAAATCTAATAAAAACACTTGTAGGCTTACTGTCCGTTGATACAGAAACAACATCAATAAAGCTGCAT
>XM_021598898.2
GTGAAATAGAGTTTTATTTTGAGCTTTCTTGTTGATTTTTGCACAGGAGAGCCCATACCGATGCTCCTGTCTCAGCGCTGCCATGACTTCAACTGGGTGATATGGAGACAGAACCCTGCCCTGGAATGCAAGAGAAGCGGGTGGTGGAGACCAATGAGCCAGTGTTGAAGAAGGCCTACACAGTCCCTGGTGACAATGAAAGTCAGGAGGAGAAAGAACTGTTCCATGGGCTTCAGCAGGAAGACAAGGAACCCCATGGGGAGGGAGACCCCAGGATAAACAGCcagggtggagggaaggagggcactACGTTAAACCAGCTCCCTATGTCTGAGATTACAGAGATCCCCTGTGTGGAAGAGAGGAAGCTGAAGACCCCCAGTTTTGTGAAGACAGTGCGGTTCAGTGAGACAGAGTctgtggaggacagagagaactcGGAGGAGGTGCTCTTCCCTGACCATGAGATGGTGCAGTGGACCTCCTCCAGCTTCGAGGAGCTGTTCCTGGCTGAGGACTGGGAGAACATCACAGATGATCGGCTGTTGAGGAAGAAGGTGCTGGTGCCTGGCCCCCAGCAAGCTGAGCACCCAGCCTGGGGTCAGGAGGTCACAGTCAAAATGCAGGGAGTGCTGGAGGACAGGACTGTGGTGGAGAAGGACCCTAAACTGGTGTTCGTCATCGGAGAGGGAGATGTAAACCAGGCCCTGGAGGAGTGTGCCATATCCATGCAGCAGGACGAGATCGCATTACTGCTGGCAGATTCACAGTACACCTATGGACTTCTGGGAAGGGAGACAGATATTCCAGCCTGGGCCCCCTTACTCTACCAGCTGCAGCTCCTGGACATCAGAGAGAAGCCCGACCCTCTGATTCTCCCCATTTCGGACCGTATGCGCATCGGAAACCAGAAACGAGAGCGTGGGAACTTCCACTTCCAGAGGGAGGAGTACAGCATGGCTGCCAGAGCCTACTGGATGGCTCTTGATGTCCTTACTACACATAATAGAGATGGTAGTAGTGATGTGCtgttggagggggaggaggaggaggtgcaggACTACCGGGTGAAGTGTCTGAACAACCTGGCAGCAGCTCAGCTGAAATTGGAGCAGTACGATGACGCACTACACACCAGCCGGGATGTTCTGTCCCTTGATCCACAAAACGTCAAAGCCCTCTTCAGGACAGGAAAGCTTCTGTCAGACAAGAGCGAGTACCAGGAGGCAATGGAGATACTGAAGAAGGCCCTGAAACTGGAGCCGTCCACTAAGGCCATCCATGTTGAGTTGTCCAAGCTAGTGAAAAGGCAATCAGGAGGCAAAGATACCCAGAAGTGGCAAGCCAAACCTGCCCAGCTCCTCGGAGACAATATTGCCCCATTTCTGACTCCTTCTAAAAAGAAGCCACCTGGAATTTCATGGACTTTCCTGCTTGGTGCTCTGGTGGTGGCCTTGGGCAGTTTAGTGACGTCAGTGGTTCTCACTGCAAGAAACTGACATCCTCTACAAAGGAACTGTCCTCTACACAAGTCCAGCTCATGAATACTAAACTGAGTTGTCTACTGTGAATAAAATAAAGATTGCACTGAACAATAAAAACAACATTTGCACCCCAGATTGTGTTTGAATGTAACAGAGTAAACTAATGGCACTTTAATTTTTTTGAACAATGAACACAAAATAGCTTTGTGTTGTAATCGTTTAGTACAGTTATTAGCTAATAAATGTCACCAATTCCATAGAAAAATGCCCAAATTCCAAAACTCATTCTGGAATAGTCACATGGTCAATGTTCCTCCACAAAAGATTGAAGAGAGCAGTATTCTCGTGTTACAGCTTTTAAATGTATTGTATGGGGTTTCTGCAATAACAGGTTGTGTCCAAATGAATAATCTATGTCAATGGAAAATCTAATAAAAACACTTGTAGGCTTACTGTCCGTTGATACAGAAACAACATCAATAAAGCTGCAT
>XM_021598889.2
ACAGCAACAAAACTGCCCTGCCACCTCCACCCAATAGCAACAAGAGACTCCAGGGTTGGGGTGACAAGTTTTCATGTCCTAAATAAGGAGAGCCCATACCGATGCTCCTGTCTCAGCGCTGCCATGACTTCAACTGGGTGATATGGAGACAGAACCCTGCCCTGGAATGCAAGAGAAGCGGGTGGTGGAGACCAATGAGCCAGTGTTGAAGAAGGCCTACACAGTCCCTGGTGACAATGAAAGTCAGGAGGAGAAAGAACTGTTCCATGGGCTTCAGCAGGAAGACAAGGAACCCCATGGGGAGGGAGACCCCAGGATAAACAGCcagggtggagggaaggagggcactACGTTAAACCAGCTCCCTATGTCTGAGATTACAGAGATCCCCTGTGTGGAAGAGAGGAAGCTGAAGACCCCCAGTTTTGTGAAGACAGTGCGGTTCAGTGAGACAGAGTctgtggaggacagagagaactcGGAGGAGGTGCTCTTCCCTGACCATGAGATGGTGCAGTGGACCTCCTCCAGCTTCGAGGAGCTGTTCCTGGCTGAGGACTGGGAGAACATCACAGATGATCGGCTGTTGAGGAAGAAGGTGCTGGTGCCTGGCCCCCAGCAAGCTGAGCACCCAGCCTGGGGTCAGGAGGTCACAGTCAAAATGCAGGGAGTGCTGGAGGACAGGACTGTGGTGGAGAAGGACCCTAAACTGGTGTTCGTCATCGGAGAGGGAGATGTAAACCAGGCCCTGGAGGAGTGTGCCATATCCATGCAGCAGGACGAGATCGCATTACTGCTGGCAGATTCACAGTACACCTATGGACTTCTGGGAAGGGAGACAGATATTCCAGCCTGGGCCCCCTTACTCTACCAGCTGCAGCTCCTGGACATCAGAGAGAAGCCCGACCCTCTGATTCTCCCCATTTCGGACCGTATGCGCATCGGAAACCAGAAACGAGAGCGTGGGAACTTCCACTTCCAGAGGGAGGAGTACAGCATGGCTGCCAGAGCCTACTGGATGGCTCTTGATGTCCTTACTACACATAATAGAGATGGTAGTAGTGATGTGCtgttggagggggaggaggaggaggtgcaggACTACCGGGTGAAGTGTCTGAACAACCTGGCAGCAGCTCAGCTGAAATTGGAGCAGTACGATGACGCACTACACACCAGCCGGGATGTTCTGTCCCTTGATCCACAAAACGTCAAAGCCCTCTTCAGGACAGGAAAGCTTCTGTCAGACAAGAGCGAGTACCAGGAGGCAATGGAGATACTGAAGAAGGCCCTGAAACTGGAGCCGTCCACTAAGGCCATCCATGTTGAGTTGTCCAAGCTAGTGAAAAGGCAATCAGGAGGCAAAGATACCCAGAAGTGGCAAGCCAAACCTGCCCAGCTCCTCGGAGACAATATTGCCCCATTTCTGACTCCTTCTAAAAAGAAGCCACCTGGAATTTCATGGACTTTCCTGCTTGGTGCTCTGGTGGTGGCCTTGGGCAGTTTAGTGACGTCAGTGGTTCTCACTGCAAGAAACTGACATCCTCTACAAAGGAACTGTCCTCTACACAAGTCCAGCTCATGAATACTAAACTGAGTTGTCTACTGTGAATAAAATAAAGATTGCACTGAACAATAAAAACAACATTTGCACCCCAGATTGTGTTTGAATGTAACAGAGTAAACTAATGGCACTTTAATTTTTTTGAACAATGAACACAAAATAGCTTTGTGTTGTAATCGTTTAGTACAGTTATTAGCTAATAAATGTCACCAATTCCATAGAAAAATGCCCAAATTCCAAAACTCATTCTGGAATAGTCACATGGTCAATGTTCCTCCACAAAAGATTGAAGAGAGCAGTATTCTCGTGTTACAGCTTTTAAATGTATTGTATGGGGTTTCTGCAATAACAGGTTGTGTCCAAATGAATAATCTATGTCAATGGAAAATCTAATAAAAACACTTGTAGGCTTACTGTCCGTTGATACAGAAACAACATCAATAAAGCTGCAT

Function

NR:

description
peptidyl-prolyl cis-trans isomerase FKBP8-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021598873.2 False 2967 mRNA 0.46 8 32218758 32267580
XM_021598882.2 False 2825 mRNA 0.47 9 32218758 32267580
XM_021598898.2 False 1975 mRNA 0.49 9 32218758 32269165
XM_021598889.2 True 2016 mRNA 0.49 10 32218758 32270230

Neighbor

gene id symbol gene type direction distance location
LOC110521435 NA coding downstream 1480 32215495 ~ 32217278 (-)
LOC110521251 LOC106573484 coding downstream 221096 31989300 ~ 31997662 (-)
LOC110521239 LOC106573487 coding downstream 376755 31808912 ~ 31842003 (-)
LOC110532195 NA coding downstream 424606 31791379 ~ 31794152 (-)
LOC110521169 LOC106573492 coding downstream 580060 31614176 ~ 31638698 (-)
pex11a pex11a coding upstream 54705 32324935 ~ 32328199 (-)
LOC110521442 NA coding upstream 58480 32328710 ~ 32330586 (-)
LOC118964447 NA coding upstream 61729 32331943 ~ 32333416 (-)
LOC110521431 LOC106561184 coding upstream 72619 32342849 ~ 32351133 (-)
neto2b LOC106573471 coding upstream 96203 32366433 ~ 32378515 (-)
G34098 NA non-coding downstream 3728 32214752 ~ 32215030 (-)
G34095 NA non-coding downstream 9335 32209211 ~ 32209423 (-)
G34094 NA non-coding downstream 9659 32207994 ~ 32209099 (-)
G34093 NA non-coding downstream 13717 32204528 ~ 32205041 (-)
G34135 NA non-coding upstream 1822 32272052 ~ 32272266 (-)
G34136 NA non-coding upstream 3185 32273415 ~ 32273615 (-)
G34139 NA non-coding upstream 6216 32276446 ~ 32276676 (-)
G33386 NA other downstream 232608 31984771 ~ 31989249 (-)
LOC110521048 LOC100194695 other downstream 773809 31426123 ~ 31444964 (-)
LOC110520932 LOC106573529 other downstream 1085867 31131151 ~ 31132900 (-)
G29906 mef2a other downstream 2938058 29280276 ~ 29280700 (-)
G29355 NA other downstream 3514402 28703887 ~ 28704356 (-)
G35075 LOC106573452 other upstream 836889 33107119 ~ 33108497 (-)
G35299 NA other upstream 1172138 33442368 ~ 33452413 (-)
G35628 NA other upstream 1597328 33867558 ~ 33868045 (-)
G36141 NA other upstream 2007470 34277700 ~ 34362736 (-)
G36196 NA other upstream 2071332 34341562 ~ 34381232 (-)

Expression


Co-expression Network