pex11a (pex11a)


Basic Information

Item Value
gene id pex11a
gene name pex11a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 32324935 ~ 32328199 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021598947.2
CCCTAAAATAGCatagatacaaagatgagtcacCTATCCATCTCTATGCAGTTGCTTTACTTTAGCCTCGGTTTGGCTGCAAGTTTGACATTTTATCTGCTGTTTGAAACAATAAGGCACTGGTCGcaatggagtcttttgttaagttTACAAATCAAAGTCAAGGAAGGGATCGTATTTTCAGGACAACCCAATATGCATGTGCCTTGGTGAAGTATTTGCTTCGCAATAATTCTGCAAGGAAAGAGCTTGTTGTCAAGCTGCAGAGTCTGGAGTCCAACATGAGTTCTGGAAGGAAATtgttcagacTGGGGAACACTGTGAATTCCATTGACGCTGCCAAGCGAACCTTGCAGCTCTCTGACCCTGTGTTGCGCCTCTGCCTTACTGTGGCGAACATCAACCGCGCCCTTTACTTTATCTGCGACAATGTGCTCTGGGCCAGAaatgttggccttgtccctggtATCGACAAGGAGCGCTGGAGCTTGAATGCCTCTTGTTGCTACTTCATGTCCCTGGTTATGAGTCTGACCAGAGATGTTTACGTAATCACCCAGACTATGGttcagagaaccagagagaggcagTTTCAGGAGAAAATGGATCAGCACCTCAATGACAACCCTGATGTGGCTACTGTTATTGTTCCTCAACTGGATGCTTTTCTGTTCCTGCTTTTCCAGAGTCTTAAAAGCCATCCCTCGGTTACCCTTGACACACTGAAAAACATTTGTGATATTTTCATTCCACTGGACAGGCTGGGTGTGTACCGGTCAAACCCAGGAGTGGTGGGCTTTTGTGGGCTGATTTCATCTCTCTTAGGGATAGTGTCAGTCTTGCACCCCAGTTTGAAAATCCAACCGTAACCTAGAGTTGAAGGAAAATGAAAGGAGCAAGAATTATGAAATGAAGAGAAGCCATACACAGTACAATGGGCAGATGCCAGTACTAAGGTTTATAGTCATTTTTCAGGGGTACTATCCTACTTTGAATCACTTCAGGGGAAGTTGCATGCTAGCAGAAGTTCACTGATTACAGCAACCCCTTCAGATAGCAATTAGGAGCTTAAAGGGCAAACACTTATGAGTAGCCAATGTTTATGATTACTGTTAGGACCAGCAACAGCTCATAGGTGGATCCATATGTACCTTTTTAGACATTTTCAAAATTAATATATTATGAAGGGAACTTTGCAGTATTTAGGAACCACAAAGACAAACGAGGCTGGACAGGGATCTTAGTCAACTTTGTTTTTCTAGTGTTTATTTGAGCACGAggaggtttgtgatatatggccaatataccacggctaagggctgttcttatgcacaacgcaacaTGGAGTGCCTcaacacagcccttagccgtggtatattgtccatgTATCATAAatccccaaggtgccttattgctctTATATACTGGTTAATGtatttagagcagtaaaaataaatgttttttcatacccatggtatacggtctgatataccatggttgtcagccaatcagctttcagggctcgaaccacccagcaATTTTTAATTGAACGTAGAGCACTGTAGGTGGGGGCCATAATGCTTTATTAGCTAAATAACTTGACGGATCATGAGTTGCGTGATTCAGCATTACCACACTGTCTCCTGTATGTCTTTGATTCTAAGGCCACTTTGTATCAGGTGAATTTGCACAGCCTGTGCAATTGATAAAAGGAAGCATTCACGTTGGAAATAAGGCCCTTATGATGTAGAATATAACTGATTGAAATGAACACAAATTCAAGTGTACTTTAGATTGTGACCAATTGGAGCATTTACTAAACAAGTTTTGTTAATGTCTTGTGTAATTGTCAaatcatgtacagtatgtttctTTATCGTTGTTTAACTATGTACCAATACATGAaacactgatgtttaggccactCCTGCCTTTTTTAGTTACAAAAATCTTCCTCTTAATAGATGCTGTTCAGCATACATAGTCTACCTCACTTTTTAGATGGTCTGCATTTTGTATTCTGCCTGGGATATCAACTATGGCAGGGATATGGCCTAGAAATCAGTATTTCTCCAGCGCTGTGAAATGTTTGTAACAAACACTATGGTTATAGAATGAAATCAAAGTTTCAAAAGGTTCTAATGAGTAACACTAATCAATAGTTGTAATGTTCTGTTTATCATGAGAAAAGTACAAAAAGTCTATGCAAATAATGTATTCCATAATGGAAGAGCCTTATTAATACTTAATATATTTCTATGCATaatgcaatgtaacaaaatggaTTGAATTTGACCAAACCTGTTCAATAATAAAATAGATTCTGTTGACGTTTAT

Function

symbol description
pex11a Predicted to be involved in peroxisome fission and regulation of peroxisome size. Predicted to be located in membrane and peroxisome. Predicted to be integral component of peroxisomal membrane. Predicted to be active in peroxisomal membrane. Orthologous to human PEX11A (peroxisomal biogenesis factor 11 alpha).

NR:

description
peroxisomal membrane protein 11A

GO:

id name namespace
GO:0016559 peroxisome fission biological_process
GO:0005779 integral component of peroxisomal membrane cellular_component

KEGG:

id description
K13351 PEX11A; peroxin-11A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021598947.2 True 2337 mRNA 0.40 3 32324935 32328199

Neighbor

gene id symbol gene type direction distance location
LOC110521366 LOC106573474 coding downstream 54705 32218758 ~ 32270230 (-)
LOC110521435 NA coding downstream 107657 32215495 ~ 32217278 (-)
LOC110521251 LOC106573484 coding downstream 327273 31989300 ~ 31997662 (-)
LOC110521239 LOC106573487 coding downstream 482932 31808912 ~ 31842003 (-)
LOC110532195 NA coding downstream 530783 31791379 ~ 31794152 (-)
LOC110521442 NA coding upstream 511 32328710 ~ 32330586 (-)
LOC118964447 NA coding upstream 3760 32331943 ~ 32333416 (-)
LOC110521431 LOC106561184 coding upstream 14650 32342849 ~ 32351133 (-)
neto2b LOC106573471 coding upstream 38234 32366433 ~ 32378515 (-)
LOC110521335 LOC106573470 coding upstream 74177 32402376 ~ 32411173 (-)
G34139 NA non-coding downstream 48259 32276446 ~ 32276676 (-)
G34136 NA non-coding downstream 51320 32273415 ~ 32273615 (-)
G34135 NA non-coding downstream 52669 32272052 ~ 32272266 (-)
G34098 NA non-coding downstream 109905 32214752 ~ 32215030 (-)
G34210 NA non-coding upstream 116726 32444925 ~ 32446401 (-)
G34242 NA non-coding upstream 148935 32477134 ~ 32477355 (-)
G34248 NA non-coding upstream 175129 32503328 ~ 32503549 (-)
G33386 NA other downstream 338785 31984771 ~ 31989249 (-)
LOC110521048 LOC100194695 other downstream 879986 31426123 ~ 31444964 (-)
LOC110520932 LOC106573529 other downstream 1192044 31131151 ~ 31132900 (-)
G29906 mef2a other downstream 3044235 29280276 ~ 29280700 (-)
G29355 NA other downstream 3620579 28703887 ~ 28704356 (-)
G35075 LOC106573452 other upstream 778920 33107119 ~ 33108497 (-)
G35299 NA other upstream 1114169 33442368 ~ 33452413 (-)
G35628 NA other upstream 1539359 33867558 ~ 33868045 (-)
G36141 NA other upstream 1949501 34277700 ~ 34362736 (-)
G36196 NA other upstream 2013363 34341562 ~ 34381232 (-)

Expression


Co-expression Network