LOC110521450


Basic Information

Item Value
gene id LOC110521450
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 32423864 ~ 32425249 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002473147.2
GACAATAGAGAATTCATTGTAAGCACCAATGTGTTTTGTCAAAATATGATCTGAAAATGTCAGTTGTTACGGATACAAGTATTCTGTGTGTATCCTGggtgtatttattttctctccccCTACTCACAGATGGCAATCATTCCCCAATCAGTCGCTAATCAGAAGACACCTGCTCCTTTTCtcctacccaatcacagttcccttcccttggtttaaaaaccctgtcagttgttCTCTCTGGAGCAATCTCTGTAAATGCCATATGTTTGTAGATCTAGTGTGGTTTAGGATACATGTCACTTTGTCCCCAcgtGGTGCGACTACTTCCCGGAGGAGAACAAGAGACAAGACGACTGGATACCGGACCCCTTTAGAGTGGAGATGGGACGCGTCACGTTGCCAAGCAACAAAGACAATCTGATGGTGGAGCTGTCATTTGATCGCGGACTGAGCATGCACTTCCCTGAAATGACACCACCAAAGTTCTGGTGCAGCGTAATGGGATAGTATCCTGTTCTCGCCTGTCATGAAATCAGAATCATGCTACCGTTCAGCACTACCTATCTGTGTTAAAGTGGCTGAAAACTAAAGTTATGATTCACTATTTTAATTATTATTGTTAATTCATTCTGACATGCATATGACATTTTATTGAACTGGTTAAAAACTtacacctttaaaaaaaaaatgtaaggttGTGAAACTATTGACATTGTAATTGATGATTAAGAATTTCTGCTGATTGCTGTTTTTTCTATTTTTAAACACTGgtatgtgttactgttcattaacattattggactggtttTGATGTCATGTTCTGAGTCTGATCATTCCTTACACCCACTCCTGAACTGGTCACCTAATTAAATGGCCTATTCTCTTCAACTGATAATAAAAGTTTGCTCAGTTAATA

Function

NR:

description
PREDICTED: protein FAM200B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002473147.2 True 916 mRNA 0.39 2 32423864 32425249

Neighbor

gene id symbol gene type direction distance location
pdp2 LOC106573473 coding downstream 958 32416697 ~ 32422906 (-)
LOC110521335 LOC106573470 coding downstream 12691 32402376 ~ 32411173 (-)
neto2b LOC106573471 coding downstream 45349 32366433 ~ 32378515 (-)
LOC110521431 LOC106561184 coding downstream 72731 32342849 ~ 32351133 (-)
LOC118964447 NA coding downstream 90448 32331943 ~ 32333416 (-)
LOC110521397 LOC106573476 coding upstream 25598 32450847 ~ 32457200 (-)
LOC110521272 LOC106597893 coding upstream 59996 32485245 ~ 32500835 (-)
LOC110532201 LOC106573459 coding upstream 105017 32530266 ~ 32734449 (-)
LOC110521494 LOC106573457 coding upstream 335948 32761197 ~ 32783979 (-)
LOC118964459 NA coding upstream 414196 32839445 ~ 32844732 (-)
LOC110521442 NA non-coding downstream 93378 32328710 ~ 32330586 (-)
G34139 NA non-coding downstream 147188 32276446 ~ 32276676 (-)
G34136 NA non-coding downstream 150249 32273415 ~ 32273615 (-)
G34135 NA non-coding downstream 151598 32272052 ~ 32272266 (-)
G34210 NA non-coding upstream 19676 32444925 ~ 32446401 (-)
G34242 NA non-coding upstream 51885 32477134 ~ 32477355 (-)
G34248 NA non-coding upstream 78079 32503328 ~ 32503549 (-)
G34257 NA non-coding upstream 91964 32517213 ~ 32517457 (-)
G34260 NA non-coding upstream 97430 32522679 ~ 32523065 (-)
G33386 NA other downstream 437714 31984771 ~ 31989249 (-)
LOC110521048 LOC100194695 other downstream 978915 31426123 ~ 31444964 (-)
LOC110520932 LOC106573529 other downstream 1290973 31131151 ~ 31132900 (-)
G29906 mef2a other downstream 3143164 29280276 ~ 29280700 (-)
G29355 NA other downstream 3719508 28703887 ~ 28704356 (-)
G35075 LOC106573452 other upstream 681870 33107119 ~ 33108497 (-)
G35299 NA other upstream 1017119 33442368 ~ 33452413 (-)
G35628 NA other upstream 1442309 33867558 ~ 33868045 (-)
G36141 NA other upstream 1852451 34277700 ~ 34362736 (-)
G36196 NA other upstream 1916313 34341562 ~ 34381232 (-)

Expression


Co-expression Network