Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110532225 |
| gene name | LOC106573449 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 33421518 ~ 33481364 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036976084.1 | False | 16399 | mRNA | 0.51 | 27 | 33421518 | 33481364 |
| XM_036976089.1 | False | 16372 | mRNA | 0.51 | 26 | 33421518 | 33481364 |
| XM_036976091.1 | False | 16329 | mRNA | 0.51 | 26 | 33421519 | 33481364 |
| XM_036976094.1 | False | 16302 | mRNA | 0.51 | 25 | 33421519 | 33481364 |
| TU39325 | True | 3420 | lncRNA | 0.39 | 2 | 33477903 | 33481350 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964465 | LOC106573449 | coding | upstream | 18742 | 33371468 ~ 33402776 (+) |
| sema3e | LOC106573450 | coding | upstream | 94995 | 33268524 ~ 33326523 (+) |
| LOC110521527 | LOC106573451 | coding | upstream | 175753 | 33216358 ~ 33245765 (+) |
| sema3d | LOC106573452 | coding | upstream | 312940 | 33037111 ~ 33108578 (+) |
| si:ch211-233h19.2 | LOC106573455 | coding | upstream | 553958 | 32844181 ~ 32867560 (+) |
| LOC110521560 | LOC106573448 | coding | downstream | 17297 | 33498661 ~ 33521668 (+) |
| LOC110521553 | LOC106573448 | coding | downstream | 52781 | 33534145 ~ 33596670 (+) |
| LOC110521571 | LOC106573447 | coding | downstream | 141505 | 33622869 ~ 33649767 (+) |
| LOC110521608 | LOC106573441 | coding | downstream | 486386 | 33967750 ~ 33977868 (+) |
| LOC110521627 | LOC106573440 | coding | downstream | 522816 | 34004180 ~ 34006028 (+) |
| G33964 | NA | non-coding | upstream | 467054 | 32954242 ~ 32954464 (+) |
| G33961 | NA | non-coding | upstream | 471229 | 32950072 ~ 32950289 (+) |
| G33955 | NA | non-coding | upstream | 485621 | 32935569 ~ 32935897 (+) |
| G33905 | NA | non-coding | upstream | 584365 | 32836548 ~ 32837153 (+) |
| G34825 | NA | non-coding | downstream | 1529 | 33482893 ~ 33483211 (+) |
| G34877 | NA | non-coding | downstream | 72859 | 33554223 ~ 33554469 (+) |
| G34879 | NA | non-coding | downstream | 78835 | 33560199 ~ 33560418 (+) |
| G35631 | NA | non-coding | downstream | 390847 | 33872211 ~ 33872428 (+) |
| G35691 | NA | non-coding | downstream | 459736 | 33941100 ~ 33941325 (+) |
| G33768 | NA | other | upstream | 803834 | 32613073 ~ 32617684 (+) |
| G33681 | LOC106573476 | other | upstream | 969133 | 32450854 ~ 32452385 (+) |
| G33284 | NA | other | upstream | 1459971 | 31956530 ~ 31961547 (+) |
| G34963 | NA | other | downstream | 220413 | 33701777 ~ 33703462 (+) |
| G35699 | NA | other | downstream | 476733 | 33958097 ~ 33958681 (+) |
| G35700 | NA | other | downstream | 478696 | 33960060 ~ 33960447 (+) |
| LOC110521835 | LOC106573423 | other | downstream | 1008756 | 34490120 ~ 34507419 (+) |
| LOC110521947 | LOC106573413 | other | downstream | 1282807 | 34763838 ~ 34808250 (+) |
