Gene
RNA
| Item | Value |
|---|---|
| gene id | rbm28 |
| gene name | rbm28 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 33944834 ~ 33953935 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| rbm28 | Predicted to enable RNA binding activity. Human ortholog(s) of this gene implicated in alopecia, neurologic defects, and endocrinopathy syndrome. Orthologous to human RBM28 (RNA binding motif protein 28). |
| description |
|---|
| RNA-binding protein 28 isoform X2 |
| id | description |
|---|---|
| K14573 | NOP4, RBM28; nucleolar protein 4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021599259.2 | False | 3144 | mRNA | 0.47 | 18 | 33944834 | 33953935 |
| XM_021599268.2 | True | 3132 | mRNA | 0.47 | 18 | 33944834 | 33953935 |
33,934,000
33,936,000
33,938,000
33,940,000
33,942,000
33,944,000
33,946,000
33,948,000
33,950,000
33,952,000
33,954,000
33,956,000
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrrc4.2 | LOC106573446 | coding | downstream | 214868 | 33724849 ~ 33729966 (-) |
| grm3 | LOC106573453 | coding | downstream | 1020235 | 32867631 ~ 32924599 (-) |
| LOC118964459 | NA | coding | downstream | 1100102 | 32839445 ~ 32844732 (-) |
| LOC110521494 | LOC106573457 | coding | downstream | 1160855 | 32761197 ~ 32783979 (-) |
| LOC110532201 | LOC106573459 | coding | downstream | 1210385 | 32530266 ~ 32734449 (-) |
| LOC118966666 | LOC106573442 | coding | upstream | 5393 | 33959328 ~ 33962096 (-) |
| LOC110521614 | LOC106573524 | coding | upstream | 29442 | 33983377 ~ 34002282 (-) |
| si:ch1073-390k14.1 | LOC106573523 | coding | upstream | 55345 | 34009280 ~ 34018443 (-) |
| LOC110521650 | LOC106573438 | coding | upstream | 71250 | 34025185 ~ 34040439 (-) |
| iqsec3b | LOC106573430 | coding | upstream | 246420 | 34200355 ~ 34245388 (-) |
| G35966 | NA | non-coding | downstream | 1862 | 33942726 ~ 33942972 (-) |
| G35964 | NA | non-coding | downstream | 5784 | 33938838 ~ 33939050 (-) |
| G35961 | NA | non-coding | downstream | 8366 | 33936214 ~ 33936468 (-) |
| G35960 | NA | non-coding | downstream | 8673 | 33935889 ~ 33936161 (-) |
| G35958 | NA | non-coding | downstream | 11575 | 33933021 ~ 33933259 (-) |
| G35968 | NA | non-coding | upstream | 566 | 33954501 ~ 33955468 (-) |
| G35979 | NA | non-coding | upstream | 14122 | 33968057 ~ 33968349 (-) |
| G35969 | LOC106573441 | non-coding | upstream | 15255 | 33969190 ~ 33970767 (-) |
| G35982 | NA | non-coding | upstream | 19571 | 33973506 ~ 33973779 (-) |
| G35986 | LOC106573441 | non-coding | upstream | 20340 | 33974275 ~ 34068011 (-) |
| G35628 | NA | other | downstream | 76789 | 33867558 ~ 33868045 (-) |
| G35299 | NA | other | downstream | 492421 | 33442368 ~ 33452413 (-) |
| G35075 | LOC106573452 | other | downstream | 836337 | 33107119 ~ 33108497 (-) |
| G33386 | NA | other | downstream | 1958684 | 31984771 ~ 31989249 (-) |
| LOC110521048 | LOC100194695 | other | downstream | 2499885 | 31426123 ~ 31444964 (-) |
| G36141 | NA | other | upstream | 323765 | 34277700 ~ 34362736 (-) |
| G36196 | NA | other | upstream | 387627 | 34341562 ~ 34381232 (-) |
| G37310 | LOC106573403 | other | upstream | 1319774 | 35273709 ~ 35278005 (-) |
| G37907 | NA | other | upstream | 1486983 | 35440918 ~ 35441328 (-) |
| G37976 | NA | other | upstream | 1629357 | 35583292 ~ 35583608 (-) |
