LOC110521923 (LOC106573414)


Basic Information

Item Value
gene id LOC110521923
gene name LOC106573414
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 34659087 ~ 34664471 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976547.1
catagaacaaaaacatcgaatgcccaccccaactcacgccctgaccaacctaaaatagaaacatacaaaaggaactaaggtcaggacgtgacaactaTGCCCAACGTTTAAATGTTTGTCATTTTCCATTTCATACCAAGAACCACAATAGCTAAATAAAACTGTTCATGACTTTGAACAACAGATTTTGTGTCTGAATAAAATGTGCATTTGGACAGTTTGCGTACGCCTAAAGTATTATTTAAACCAAGTGTAATATCATCTGCATGATTTTTAaattcagatccaaagataatgAAAATGGGATCAGGTTGAAAGAAAAGTAATTTTTTTCCTTGGAATGGCAATCATTTGAACACGTCAAAATGTTGTTCAGTATCATTTCTAACGTTGTAAATGATTTAGTATATTTGTTTGCTAAGTGCAGTACCCTCAGTTTTGGTATGTCGGTTATAGTAAAGGTTTCCCTATGAATTGACCCTATGATATCAGAATTAGAATGTATGCTGTGGATGTAGGCCGGTGTTAGATTTTAGAGAATATGAAACTGCCTATTTTAGAAGCCAGTGCGTCATCATCTAGCTTCATTTTTGAGTATTTTACATTACATCTCAATCCTGTCCAAAATCCTCCTGCGGTGTAAATATGATAAATTAACAGCTAATAAACAGGCTTGATACCTGATTGATTATGGATATTCATTTATTGATATGGCAACAGTTCTTTTCACCTTGTACGTGTACTGTAGAAAAACAATACATGTTCAGGAACCAGAGCTCCCCCTAATGGTACAATTCTTAGCAGATTTAGGGGAGTCGTATTTCACACTAGCATACTTAATGCTAATCTGTAAGGATTGGGTAGATATTCAATATGGAAATAGCTACACCTCTTAACTAGGTGGGAGTTTCACTATGTCACTAACATCCATATTTCTTCCTTTCAGTGCATAGAAGGAAGGGGAATGGGGAGTACCTAGGGGTAGGGGCTATGGGTTCATTTGGAATTAGGCACAAGTCCCCCATGATGCCTAAAATAGATCAGTCCTTTAGAGCTGTTTTTCTGCACACAGTTCCATGTAAGCCCTGCTTGGACTGTCTATGGAGAAGAGGCTTTATAACTGACCTTGTCTACTCTCACACGGGGATCGAAGCTGGATTTTGGATTTATGCACGTTTGGGATGTCATTGTTAGGGGTCCAAGCAACATAGTTGCTGTGGACCAATTGCATTTCTTTCTTCTTTTGTGTGGCCACCGGTGTGTGGCATTCAGCTAGTattacagctgctgctgctgctgctggactGTTATCTTATCAGACATGTGACTCTGAGCTGCGATGGATCAGGGAGATAAATTATGATAAGTCATCTCAGACCGTATGTGAAAGTTGTGGTGCTGTGGATCAGCGGGTGGTTGAAGTACGCGTTAGAGAGGGTGTGGAGAATGCCGTTCTCAGTGCCACACACCtgggtgacatcaccaggcaacTCAGGTGAAGGACTGTATGACAGGTTGTCAAAGGAGTGGCTAACCAATGAGGTGTATCGTACCTATCACCATGGAAGTGGAACAATGGTTACAGTCCAGACCAGCACACATGCCTTCTACGTGAACCTTGGtcgactgactgactgtagtgAGTACTTCAGAGCCCTGTCCCAGTCCAGTAtgagagagaccacagagagcCTGATTGTCCTGGATCACATTCCCTCCTCAGTCTTCCATTCCCTCCTAGAATTCTGCTTCCGGAATGACTTCAGCGTTCCCCCGGAGGAGTTGGGAGAACACATCCAAGTGGGCAGCTACCTGCTGGCTGAGGCCTTTGTGTCGCAGTGCCTGTTGGCCCTGTCTGGTGTTCTAACCCCAGACACCTGCctgtcctacctggctctggccCGGGACATCAGCTGTACTGAGATGGAGACGACTGTGTTCTCCTACCTCAGCAGACACCTTCTGGAGCTGTCTCACCTCACCAGGTGTTTGCCGGCTGAAGACAGGGCTGAACTGACCCGTCTGAGGTGGCAGGGTGATCTCCGGCTCTGCTGCGTGAGGAAGGAGAACCTGACCTCCTGGAATGACCTAGAAACAGAAGCCGCCCGCCACCTCTTCACCCTAGATGGATCAGAGGTCACTGGTGACTGGCGTCCACTAACAGAGCTCCCCTTCATGGCTGATAAGTGGTGCTTCACCACGGTGGTTCTACTCAACTACCTCTACCTCATCGGTGGCTACAGGCAGCGGGCCAAGAGGGGCTGGGAGTTCAAAATGGCCTCCTTTAGGTACAACCCCTTCACCAACACCTGGGTCTCCACTGCACCTCTCATCAAGCACAGGAGGCATTTCAGTGCGGTGTCATGTGATGGCTGTATCTATGCTGTGGGAGGCTGGTACTTGGACTCTTTGGTGACTCCGGACTCTAGCACAGCCCTCTACACTGCTGTGGAGCGATACCACCCCAGGGACAACACATGGACGtttgtctcctctctgcctctgactgacttacagttcaccATGTCCCTGTCCCATGACCTCCCTCTGGCCACCAGCCTGGGCTCCCGTCTCTATGTCCTGGGGAACATCCAGAGGACTGGAGAAAAGCTGCTTCTACAGTATGACACCAGGCAAGACTTATGGTCTGAGCTGCTCCCTACCCTAACCAAAGCCAACGCTGACCTCCCCAGCCTCTACTTCCTGGGTGCCACGGACCGGCTGTTTGTGATTGGAGGAAACAACTCAGAGAATGTGGTGACATCATTCTGTGTGGAGTCTGGGAAGTGGGGGCAGGTGAAAGGGGCTGAGAAGGTAGCATTAGCTGGACAAGGGACAGTACTGGGTGACCAGGTGTACATGCCAGGTATAGAACACAACGCTGCTGTAAGGCTGGATCTCCACTCCCTATctctcactgtcctccctcctctacccatcTGCATTCGCTATGAAGCCCTCCTTCACCTTTCCTTCTAAAACAACTTTCATCAATTAGTCTGATTTGACTTGCCTTGCTGTTTctggggtttaggtcagggttTTTTGTTTAGTGCTTCTGGACAAACGCAGACTCATCATCAAGGGGGTCTTTGCTACATGTGGACTTCACCATTCTGTGTCAGCAACAATATGCCTTGTCCTGCTTTCACTCTGCCTTACATGACAACTTTATTAACTTAAGTAGGCCTAATCTACAGGATCTACTCACCGGACCGATTGTCCTCCGGCTTGTGTTCAGTTTGCAAATTACAGCCAAGactgttcagaggtgctaagtactctcgCCAGCAGATGCTAGACAATCCTACCGGTCTGGTCGTCTCTTAAATCTTTACCCGGAGGAGGATGGGCTCCCAATCTCATTTTCTTCTTAGTCAGGTTCCTTTTAAAGGTTTCCTAGGGAGTTTTCCCCAGTAACCACGTTTCCTTCCAGTTTTTATGTGAGTGAAGTTATACCATATAAATTAAAAAAATCACGAGAGCTGtggtggaaacaggaagttttggTACAATTGTATAAATGCCGACAGATCATTTGTGCGTTCGAcgtggtgggatctttttgtgttggtAAGATTCATTATGGCGTTGCAGTGGAAACAACTTAATGCACAAGTATTGATATATTATAACAATATCGAAGGTAACCTGGAGGCACGtgtgatgatatggtgtgtggtcctacTACTAAGACTCGGGAaatcatgcagtttattaggatgcagatgaaataagttatgatgaattTCACAACAGTGTGCGGTGATGAGTTTGATGCGCCTTTCCAATAAATGTTGAGtgtgacatgatgattgatgcttgactgccatttgacaaataaagaTATTCGgtctcttatcca

Function

NR:

description
kelch repeat and BTB domain-containing protein 13-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976547.1 True 3865 mRNA 0.46 9 34659087 34664471

Neighbor

gene id symbol gene type direction distance location
LOC110521764 LOC106573421 coding downstream 168908 34473968 ~ 34490179 (-)
LOC110521742 LOC105022204 coding downstream 192376 34459428 ~ 34466711 (-)
LOC118964492 NA coding downstream 356482 34296687 ~ 34302605 (-)
iqsec3b LOC106573430 coding downstream 413699 34200355 ~ 34245388 (-)
LOC110521650 LOC106573438 coding downstream 618648 34025185 ~ 34040439 (-)
zp2.3 zp2.3 coding upstream 22279 34686750 ~ 34690959 (-)
LOC118947385 NA coding upstream 191990 34856461 ~ 34868295 (-)
LOC110521966 rabl2a coding upstream 616814 35281285 ~ 35285817 (-)
odf3b odf3b coding upstream 622070 35286541 ~ 35287452 (-)
LOC110520384 LOC106573404 coding upstream 649482 35313953 ~ 35316192 (-)
G36491 NA non-coding downstream 104330 34552678 ~ 34554757 (-)
G36471 NA non-coding downstream 137518 34521306 ~ 34521569 (-)
G36438 NA non-coding downstream 188041 34469826 ~ 34471046 (-)
G36209 NA non-coding downstream 207317 34368150 ~ 34451770 (-)
G36202 NA non-coding downstream 211484 34349113 ~ 34447603 (-)
G36579 NA non-coding upstream 34328 34698799 ~ 34703817 (-)
G36585 NA non-coding upstream 41429 34705900 ~ 34706163 (-)
G36588 NA non-coding upstream 48734 34713205 ~ 34808214 (-)
G36674 NA non-coding upstream 153858 34818329 ~ 34819021 (-)
G36680 NA non-coding upstream 158768 34823239 ~ 34823474 (-)
G36196 NA other downstream 277855 34341562 ~ 34381232 (-)
G36141 NA other downstream 296351 34277700 ~ 34362736 (-)
G35628 NA other downstream 791042 33867558 ~ 33868045 (-)
G35299 NA other downstream 1206674 33442368 ~ 33452413 (-)
G35075 LOC106573452 other downstream 1550590 33107119 ~ 33108497 (-)
G37310 LOC106573403 other upstream 609238 35273709 ~ 35278005 (-)
G37907 NA other upstream 776447 35440918 ~ 35441328 (-)
G37976 NA other upstream 918821 35583292 ~ 35583608 (-)
G38045 LOC106573386 other upstream 1056969 35721440 ~ 35722056 (-)
LOC110522187 LOC106573361 other upstream 1705623 36370091 ~ 36409064 (-)

Expression


Co-expression Network