zp2.3 (zp2.3)


Basic Information

Item Value
gene id zp2.3
gene name zp2.3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 34686750 ~ 34690959 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124600.1
GTAGCGAAGCCATTGCGATGAAGTGGAGTGCAGTTTGTCTAGTGGCAGTGGCCACGCTTGGCTGGCTGTGTGATGCTCAGATTTACTTGGAAAAACCAGGGTGGCCACCCATCCAGACACCACCGTCATGGCCAGCCCAACCCCCTCAGAAGCCTATTCAACCCCCTCAGAGGCCTGCCCAGCCCCCTCAGTGGCCTGTCCAGCCCCCTCAGAGGCCTGCCCAACCCCCTCAGAGGCCTGCCCAGCCCCCTCAGAGGCCTGCCCAACCCCAGCAGTGGCCTGCCCAACCCCCTCAGAGGCCTGCCCAGCCCCCTCAGTGGCCTGCCCAACCCCCTCAGAGGCCTGCCCAACCCCCTCAAAGACCTGCCCAACCCCCTCAGAGGCCTGCCCAACCCCCTCAAAGGCCTGCCCAACCCCCTCAGTGGCCTGTTCATCCCCCTCAGTGGCCTGTCCAACCCGGTACGCCGCTTCAGAGGCCTAAATTCCCCTCTGACCCAGGCTCAAAGCAGAGCTGTGATGTTGATGGCCAACACAAGGTGCAGTGTGGACTTCCTGACATCACTGCCGCCCATTGTGATGCCATTAACTGCTGTTTTGATGGACGGATGTGCTTCTACGGAAAATCAGTGACTGTTCAGTGTACCAAGGATGGCcagtttgtggtggtggtggccaGGGATGCCACTCTGCCCAGCCTGGAACTGGACTCCATCAGCCTGCTGGGGACAAACGGAGCCCACTGCCACCCTATTGGCACAACTTCTGTCTTTGCCATCTACCAGTTTAAAGTCACTGAATGTGGAACTGTCATGACGGAGGAAACGGATACTATTATCTATGAGAATAGGATGTCCTCTTCATATCAAGTGGGGGTTGGCCCCTTTGGCTCCATCACCAGGGACAGCCAATATGATCTAACATTCCAGTGCAGATATAAGGGCAGTACCATTGTGGCTGTGGTTATTGATGTGAAGCCGGTTCCTCCTCCAAATCCTGATATAGCTCCTGGGCCCCTCATAGTTGAGCTCAGACTGGGCAGCGGAGGATGCCTTACCAAGGGATGTAATGAAGAGGAAGTGGCCTACACCTCTTACTACACAGAGGCAGACTACCCTGTCACCAAGGTCCTCAGGGATCCTGTCTACACTGAGGTTCGCATCCTGGCGAGGACAGATCCCAACATTGTGCTGACCCTGGGTCGCTGCTGGGCTACCACAACCCCAAACCCTCTCAGCCTGCCCCAGTGGGACCTTCTCATTGATGGATGTCCTTACCAGGATGACCGTTACCTGACCATTCCCATCACTGTGGGACCCTCTTCGGGTCTGTCCTACCCAACCCACTACAGGCGCTTCGTCCTTAAGATGTTCACCTTTGTAGATCCAATGTCTATGGCCCCCCTGAGGGAGACGGTGTTCATCCATTGTAATACAGCTGTGTGCCTGCCATCCCTTGGAGACAGCTGTGAACCAAGATGCTACAGAAAGAGGAGAGACATTCCTGCTGCAGTTCAGAAGACCACCAGAATCAAGTCTAATTTGGTTTCCAGTGGCGAACTGATCCTGACTGACCCAAGGGAGCTCACCAACTAGAAAATCTTTTGACTTAACTCAAGCACTTTGTCACCGTGGTGCTGCCGGCTGTTATGATGACTTCACAGTGAGGCATGTGCAAATAAATCTGACTGTCCTCG

Function

symbol description
zp2.3 Predicted to be located in extracellular region. Is expressed in ovary. Orthologous to human ZP4 (zona pellucida glycoprotein 4).

NR:

description
choriogenin H beta

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124600.1 True 1693 mRNA 0.55 8 34686750 34690959

Neighbor

gene id symbol gene type direction distance location
LOC110521923 LOC106573414 coding downstream 22279 34659087 ~ 34664471 (-)
cpt1 cpt1 coding downstream 26597 34647385 ~ 34660153 (-)
LOC110521764 LOC106573421 coding downstream 196571 34473968 ~ 34490179 (-)
LOC110521742 LOC105022204 coding downstream 220039 34459428 ~ 34466711 (-)
LOC118964492 NA coding downstream 384145 34296687 ~ 34302605 (-)
LOC118947385 NA coding upstream 165502 34856461 ~ 34868295 (-)
LOC110521966 rabl2a coding upstream 590326 35281285 ~ 35285817 (-)
odf3b odf3b coding upstream 595582 35286541 ~ 35287452 (-)
LOC110520384 LOC106573404 coding upstream 622994 35313953 ~ 35316192 (-)
LOC110532260 NA coding upstream 743836 35433794 ~ 35694776 (-)
G36491 NA non-coding downstream 131993 34552678 ~ 34554757 (-)
G36471 NA non-coding downstream 165181 34521306 ~ 34521569 (-)
G36438 NA non-coding downstream 215704 34469826 ~ 34471046 (-)
G36209 NA non-coding downstream 234980 34368150 ~ 34451770 (-)
G36202 NA non-coding downstream 239147 34349113 ~ 34447603 (-)
G36579 NA non-coding upstream 7840 34698799 ~ 34703817 (-)
G36585 NA non-coding upstream 14941 34705900 ~ 34706163 (-)
G36588 NA non-coding upstream 22246 34713205 ~ 34808214 (-)
G36674 NA non-coding upstream 127370 34818329 ~ 34819021 (-)
G36680 NA non-coding upstream 132280 34823239 ~ 34823474 (-)
G36196 NA other downstream 305518 34341562 ~ 34381232 (-)
G36141 NA other downstream 324014 34277700 ~ 34362736 (-)
G35628 NA other downstream 818705 33867558 ~ 33868045 (-)
G35299 NA other downstream 1234337 33442368 ~ 33452413 (-)
G35075 LOC106573452 other downstream 1578253 33107119 ~ 33108497 (-)
G37310 LOC106573403 other upstream 582750 35273709 ~ 35278005 (-)
G37907 NA other upstream 749959 35440918 ~ 35441328 (-)
G37976 NA other upstream 892333 35583292 ~ 35583608 (-)
G38045 LOC106573386 other upstream 1030481 35721440 ~ 35722056 (-)
LOC110522187 LOC106573361 other upstream 1679135 36370091 ~ 36409064 (-)

Expression


Co-expression Network