LOC110522006 (LOC106573384)


Basic Information

Item Value
gene id LOC110522006
gene name LOC106573384
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 35742650 ~ 35749599 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600073.2
GGAGAGCATCGCATGTCCTCGCCCACGGTAAAGTAGGTAGTCGGCTGACAGGGCACATACGACAGACGCACCACCCATTACACTAAATAACATTCTTTCTTCACTATGTATCCAGGCATGGCTCCTCAAATATCACCCTAGTGAGGCGTGAACCAGCACGAGCGGTAACATGGCCACCTATCACCAGATACCTGATGATGAGAAGGGGTATGAGTTGGACCTCTTCTGTGTCCCCAAACACTATGAGGAGGATTTAGACCGGGTCATCATCCCTCATGGACTGATCATGGACAGgactGAGCGCCTGGCTCGTGATATAGTCCGGGACATGGGGGGACACCATATAGTAGCACTGTGTGTTCTCAAAGGAGGTTATAAATTCTTTTCCGACCTGCTGGACTACATCAAGGCCCTAAATCAGAACTGCGATAAGTCTGTCCCGTTGACTGTGGATTTCATTAGACTAAAGAGCTATTGCAATGACCAGTCTACAAACAGTGTCAAAGTTATTGGAGGGGATGAGCTCTCTACTCTAACGGGGAAGAATGTTTTGATAGTTGAGGACATTGTGGAGACTGGGAGGACTATGGAGACACTGCTATCACTGCTGAGTGAATGCAATCCAAAGATGGTCAAAGTGGTCAGCCTTCTAGTTAAGAGAACACCAAGGAGTTCAGGATACAGACCAGACTACATGGGGTTTGAGGTGCCTGATTGGTTCCTGGTGGGATATGCCCTGGACTACAACGAGTATTTCAGAGATCTCGGTCACATCTGTATACTGAACGAGAAAGCAAAGGTGAAGTACAAAGTGTGAGTTGAAGAGGAGGCAATGGACAGATGGATGAACCACTTTGGATGAAACACTAGGaaaattgagatttttggggTTCTgaaccaaatgtttttttttatttattttttactcatgGATCCTACTTACATACTTAATAGAGCCCCACGGTGGTGTCATAATACCTATATAatctaaaggtcaatcagataaATGGTTCCAATTggttttccaccattcatttttcccatagggaattttaaaaacaattcaaataagggctgtgtttcgtgtaggctcaCCCCGGTGTGATGTTTAGATACCGTTTGGAACCACTTTTTTGTTTGGCCGATggatttaatgggtattatgactcgtACATTGGTACTCTATGTGAACACATGGATTGTGAATTCACTTTGCAAGATGCTCTTTGAGAAcatttttatttcttattttcaaaATGATTGTTGCCCTGGAAGGAGTGGGATGAGTAATGTGTTTTTAAGTAGAGGAGGACTCGTGTAAAGATGGTTATGGGAGATATTACACTATTATAATttcaatgtattttatatattatCTTGGGGCCTCGAAGGCCTCTTAGTCTGATTACGTTAGTAATAGTGAAcagtggcgacctgtcattcagggtaGGTGTGGCAGAGCCCCACTTGTTTTAAGCCCCACTTGTTTtaagccccacctgttttgagccccacctgttttagGGGGgattgcctgttttgcatgttattttgtcaTTGATACGTGTCAtcagtttgtaaacaatgt
>XM_021600080.2
GTGACGTGAAGGTTTAAAATCCCGGGGGAGGGAGAGCATCGCATGTCCTCGCCCACGGTAAAGCATGGCTCCTCAAATATCACCCTAGTGAGGCGTGAACCAGCACGAGCGGTAACATGGCCACCTATCACCAGATACCTGATGATGAGAAGGGGTATGAGTTGGACCTCTTCTGTGTCCCCAAACACTATGAGGAGGATTTAGACCGGGTCATCATCCCTCATGGACTGATCATGGACAGgactGAGCGCCTGGCTCGTGATATAGTCCGGGACATGGGGGGACACCATATAGTAGCACTGTGTGTTCTCAAAGGAGGTTATAAATTCTTTTCCGACCTGCTGGACTACATCAAGGCCCTAAATCAGAACTGCGATAAGTCTGTCCCGTTGACTGTGGATTTCATTAGACTAAAGAGCTATTGCAATGACCAGTCTACAAACAGTGTCAAAGTTATTGGAGGGGATGAGCTCTCTACTCTAACGGGGAAGAATGTTTTGATAGTTGAGGACATTGTGGAGACTGGGAGGACTATGGAGACACTGCTATCACTGCTGAGTGAATGCAATCCAAAGATGGTCAAAGTGGTCAGCCTTCTAGTTAAGAGAACACCAAGGAGTTCAGGATACAGACCAGACTACATGGGGTTTGAGGTGCCTGATTGGTTCCTGGTGGGATATGCCCTGGACTACAACGAGTATTTCAGAGATCTCGGTCACATCTGTATACTGAACGAGAAAGCAAAGGTGAAGTACAAAGTGTGAGTTGAAGAGGAGGCAATGGACAGATGGATGAACCACTTTGGATGAAACACTAGGaaaattgagatttttggggTTCTgaaccaaatgtttttttttatttattttttactcatgGATCCTACTTACATACTTAATAGAGCCCCACGGTGGTGTCATAATACCTATATAatctaaaggtcaatcagataaATGGTTCCAATTggttttccaccattcatttttcccatagggaattttaaaaacaattcaaataagggctgtgtttcgtgtaggctcaCCCCGGTGTGATGTTTAGATACCGTTTGGAACCACTTTTTTGTTTGGCCGATggatttaatgggtattatgactcgtACATTGGTACTCTATGTGAACACATGGATTGTGAATTCACTTTGCAAGATGCTCTTTGAGAAcatttttatttcttattttcaaaATGATTGTTGCCCTGGAAGGAGTGGGATGAGTAATGTGTTTTTAAGTAGAGGAGGACTCGTGTAAAGATGGTTATGGGAGATATTACACTATTATAATttcaatgtattttatatattatCTTGGGGCCTCGAAGGCCTCTTAGTCTGATTACGTTAGTAATAGTGAAcagtggcgacctgtcattcagggtaGGTGTGGCAGAGCCCCACTTGTTTTAAGCCCCACTTGTTTtaagccccacctgttttgagccccacctgttttagGGGGgattgcctgttttgcatgttattttgtcaTTGATACGTGTCAtcagtttgtaaacaatgt
>XM_021600087.2
ATGGATTGTGACGTGAAGGTTTAAAATCCCGGGGGAGGGAGAGCATCGCATGTCCTCGCCCACGGCATGGCTCCTCAAATATCACCCTAGTGAGGCGTGAACCAGCACGAGCGGTAACATGGCCACCTATCACCAGATACCTGATGATGAGAAGGGGTATGAGTTGGACCTCTTCTGTGTCCCCAAACACTATGAGGAGGATTTAGACCGGGTCATCATCCCTCATGGACTGATCATGGACAGgactGAGCGCCTGGCTCGTGATATAGTCCGGGACATGGGGGGACACCATATAGTAGCACTGTGTGTTCTCAAAGGAGGTTATAAATTCTTTTCCGACCTGCTGGACTACATCAAGGCCCTAAATCAGAACTGCGATAAGTCTGTCCCGTTGACTGTGGATTTCATTAGACTAAAGAGCTATTGCAATGACCAGTCTACAAACAGTGTCAAAGTTATTGGAGGGGATGAGCTCTCTACTCTAACGGGGAAGAATGTTTTGATAGTTGAGGACATTGTGGAGACTGGGAGGACTATGGAGACACTGCTATCACTGCTGAGTGAATGCAATCCAAAGATGGTCAAAGTGGTCAGCCTTCTAGTTAAGAGAACACCAAGGAGTTCAGGATACAGACCAGACTACATGGGGTTTGAGGTGCCTGATTGGTTCCTGGTGGGATATGCCCTGGACTACAACGAGTATTTCAGAGATCTCGGTCACATCTGTATACTGAACGAGAAAGCAAAGGTGAAGTACAAAGTGTGAGTTGAAGAGGAGGCAATGGACAGATGGATGAACCACTTTGGATGAAACACTAGGaaaattgagatttttggggTTCTgaaccaaatgtttttttttatttattttttactcatgGATCCTACTTACATACTTAATAGAGCCCCACGGTGGTGTCATAATACCTATATAatctaaaggtcaatcagataaATGGTTCCAATTggttttccaccattcatttttcccatagggaattttaaaaacaattcaaataagggctgtgtttcgtgtaggctcaCCCCGGTGTGATGTTTAGATACCGTTTGGAACCACTTTTTTGTTTGGCCGATggatttaatgggtattatgactcgtACATTGGTACTCTATGTGAACACATGGATTGTGAATTCACTTTGCAAGATGCTCTTTGAGAAcatttttatttcttattttcaaaATGATTGTTGCCCTGGAAGGAGTGGGATGAGTAATGTGTTTTTAAGTAGAGGAGGACTCGTGTAAAGATGGTTATGGGAGATATTACACTATTATAATttcaatgtattttatatattatCTTGGGGCCTCGAAGGCCTCTTAGTCTGATTACGTTAGTAATAGTGAAcagtggcgacctgtcattcagggtaGGTGTGGCAGAGCCCCACTTGTTTTAAGCCCCACTTGTTTtaagccccacctgttttgagccccacctgttttagGGGGgattgcctgttttgcatgttattttgtcaTTGATACGTGTCAtcagtttgtaaacaatgt
>XM_036976665.1
TGGCTATGGTAAAATGGATTGTGACGTGAAGGTTTAAAATCCCGGGGGAGGGAGAGCATCGCATGTCCTCGCCCACGGTAAAGTAGGTAGTCGGCTGACAGGGCACATACGACAGACGCACCACCCATTACACTAAATAACATTCTTTCTTCACTATGTATCCAGGCATGGCTCCTCAAATATCACCCTAGTGAGGCGTGAACCAGCACGAGCGGTAACATGGCCACCTATCACCAGGTTCTAGCTGCAATCCAATTACAAGCCTGAACAAAAAGTCGGACCAATCAGAAAATGTCTTTGCCATATCTCTAAGAATGGCGGAGTTTGTTTTTCTTGGCCGGGTACCTCAGATACCTGATGATGAGAAGGGGTATGAGTTGGACCTCTTCTGTGTCCCCAAACACTATGAGGAGGATTTAGACCGGGTCATCATCCCTCATGGACTGATCATGGACAGgactGAGCGCCTGGCTCGTGATATAGTCCGGGACATGGGGGGACACCATATAGTAGCACTGTGTGTTCTCAAAGGAGGTTATAAATTCTTTTCCGACCTGCTGGACTACATCAAGGCCCTAAATCAGAACTGCGATAAGTCTGTCCCGTTGACTGTGGATTTCATTAGACTAAAGAGCTATTGCAATGACCAGTCTACAAACAGTGTCAAAGTTATTGGAGGGGATGAGCTCTCTACTCTAACGGGGAAGAATGTTTTGATAGTTGAGGACATTGTGGAGACTGGGAGGACTATGGAGACACTGCTATCACTGCTGAGTGAATGCAATCCAAAGATGGTCAAAGTGGTCAGCCTTCTAGTTAAGAGAACACCAAGGAGTTCAGGATACAGACCAGACTACATGGGGTTTGAGGTGCCTGATTGGTTCCTGGTGGGATATGCCCTGGACTACAACGAGTATTTCAGAGATCTCGGTCACATCTGTATACTGAACGAGAAAGCAAAGGTGAAGTACAAAGTGTGAGTTGAAGAGGAGGCAATGGACAGATGGATGAACCACTTTGGATGAAACACTAGGaaaattgagatttttggggTTCTgaaccaaatgtttttttttatttattttttactcatgGATCCTACTTACATACTTAATAGAGCCCCACGGTGGTGTCATAATACCTATATAatctaaaggtcaatcagataaATGGTTCCAATTggttttccaccattcatttttcccatagggaattttaaaaacaattcaaataagggctgtgtttcgtgtaggctcaCCCCGGTGTGATGTTTAGATACCGTTTGGAACCACTTTTTTGTTTGGCCGATggatttaatgggtattatgactcgtACATTGGTACTCTATGTGAACACATGGATTGTGAATTCACTTTGCAAGATGCTCTTTGAGAAcatttttatttcttattttcaaaATGATTGTTGCCCTGGAAGGAGTGGGATGAGTAATGTGTTTTTAAGTAGAGGAGGACTCGTGTAAAGATGGTTATGGGAGATATTACACTATTATAATttcaatgtattttatatattatCTTGGGGCCTCGAAGGCCTCTTAGTCTGATTACGTTAGTAATAGTGAAcagtggcgacctgtcattcagggtaGGTGTGGCAGAGCCCCACTTGTTTTAAGCCCCACTTGTTTtaagccccacctgttttgagccccacctgttttagGGGGgattgcctgttttgcatgttattttgtcaTTGATACGTGTCAtcagtttgtaaacaatgt
>XM_036976657.1
CTGGCTATGGTAAAATGGATTGTGACGTGAAGGTTTAAAATCCCGGGGGAGGGAGAGCATCGCATGTCCTCGCCCACGGTAAAGTAGGTAGTCGGCTGACAGGGCACATACGACAGACGCACCACCCATTACACTAAATAACATTCTTTCTTCACTATGTATCCAGGCATGGCTCCTCAAATATCACCCTAGTGAGGCGTGAACCAGCACGAGCGGTAACATGGCCACCTATCACCAGATAGAACCCAAGGTCGCTTTGCTCCGTCAGATACCTGATGATGAGAAGGGGTATGAGTTGGACCTCTTCTGTGTCCCCAAACACTATGAGGAGGATTTAGACCGGGTCATCATCCCTCATGGACTGATCATGGACAGgactGAGCGCCTGGCTCGTGATATAGTCCGGGACATGGGGGGACACCATATAGTAGCACTGTGTGTTCTCAAAGGAGGTTATAAATTCTTTTCCGACCTGCTGGACTACATCAAGGCCCTAAATCAGAACTGCGATAAGTCTGTCCCGTTGACTGTGGATTTCATTAGACTAAAGAGCTATTGCAATGACCAGTCTACAAACAGTGTCAAAGTTATTGGAGGGGATGAGCTCTCTACTCTAACGGGGAAGAATGTTTTGATAGTTGAGGACATTGTGGAGACTGGGAGGACTATGGAGACACTGCTATCACTGCTGAGTGAATGCAATCCAAAGATGGTCAAAGTGGTCAGCCTTCTAGTTAAGAGAACACCAAGGAGTTCAGGATACAGACCAGACTACATGGGGTTTGAGGTGCCTGATTGGTTCCTGGTGGGATATGCCCTGGACTACAACGAGTATTTCAGAGATCTCGGTCACATCTGTATACTGAACGAGAAAGCAAAGGTGAAGTACAAAGTGTGAGTTGAAGAGGAGGCAATGGACAGATGGATGAACCACTTTGGATGAAACACTAGGaaaattgagatttttggggTTCTgaaccaaatgtttttttttatttattttttactcatgGATCCTACTTACATACTTAATAGAGCCCCACGGTGGTGTCATAATACCTATATAatctaaaggtcaatcagataaATGGTTCCAATTggttttccaccattcatttttcccatagggaattttaaaaacaattcaaataagggctgtgtttcgtgtaggctcaCCCCGGTGTGATGTTTAGATACCGTTTGGAACCACTTTTTTGTTTGGCCGATggatttaatgggtattatgactcgtACATTGGTACTCTATGTGAACACATGGATTGTGAATTCACTTTGCAAGATGCTCTTTGAGAAcatttttatttcttattttcaaaATGATTGTTGCCCTGGAAGGAGTGGGATGAGTAATGTGTTTTTAAGTAGAGGAGGACTCGTGTAAAGATGGTTATGGGAGATATTACACTATTATAATttcaatgtattttatatattatCTTGGGGCCTCGAAGGCCTCTTAGTCTGATTACGTTAGTAATAGTGAAcagtggcgacctgtcattcagggtaGGTGTGGCAGAGCCCCACTTGTTTTAAGCCCCACTTGTTTtaagccccacctgttttgagccccacctgttttagGGGGgattgcctgttttgcatgttattttgtcaTTGATACGTGTCAtcagtttgtaaacaatgt

Function

NR:

description
hypoxanthine-guanine phosphoribosyltransferase-like isoform X1

GO:

id name namespace
GO:0021551 central nervous system morphogenesis biological_process
GO:0006166 purine ribonucleoside salvage biological_process
GO:0005737 cytoplasm cellular_component
GO:0004422 hypoxanthine phosphoribosyltransferase activity molecular_function

KEGG:

id description
K00760 hprT, hpt, HPRT1; hypoxanthine phosphoribosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600073.2 False 1588 mRNA 0.43 9 35742650 35749548
XM_021600080.2 False 1535 mRNA 0.43 10 35742650 35749578
XM_021600087.2 False 1537 mRNA 0.43 10 35742650 35749585
XM_036976665.1 False 1751 mRNA 0.43 10 35742650 35749598
XM_036976657.1 True 1669 mRNA 0.43 9 35742650 35749599

Neighbor

gene id symbol gene type direction distance location
LOC110532260 NA coding downstream 47874 35433794 ~ 35694776 (-)
LOC110520384 LOC106573404 coding downstream 426458 35313953 ~ 35316192 (-)
odf3b odf3b coding downstream 455198 35286541 ~ 35287452 (-)
LOC110521966 rabl2a coding downstream 456833 35281285 ~ 35285817 (-)
LOC118947385 NA coding downstream 874355 34856461 ~ 34868295 (-)
LOC110521997 LOC100196677 coding upstream 706 35750305 ~ 35753348 (-)
LOC110522154 LOC105022174 coding upstream 142908 35892507 ~ 35914512 (-)
cax2 LOC106573379 coding upstream 190143 35939742 ~ 35961413 (-)
armc10 armc10 coding upstream 221732 35971331 ~ 35982887 (-)
LOC110522092 lrrc17 coding upstream 255903 36005053 ~ 36045196 (-)
G38059 NA non-coding downstream 147 35742286 ~ 35742503 (-)
G38050 NA non-coding downstream 7661 35734776 ~ 35734989 (-)
G38049 NA non-coding downstream 9970 35732342 ~ 35732680 (-)
G38047 LOC106573386 non-coding downstream 16549 35724308 ~ 35726101 (-)
G38046 LOC106573386 non-coding downstream 18465 35723818 ~ 35724185 (-)
G38126 NA non-coding upstream 113226 35862825 ~ 35863462 (-)
G38139 LOC106573381 non-coding upstream 138988 35888587 ~ 35891659 (-)
G38147 NA non-coding upstream 192761 35942360 ~ 35942604 (-)
G38119 NA non-coding upstream 193087 35942686 ~ 35943267 (-)
G38045 LOC106573386 other downstream 20594 35721440 ~ 35722056 (-)
G37976 NA other downstream 159042 35583292 ~ 35583608 (-)
G37907 NA other downstream 301322 35440918 ~ 35441328 (-)
G37310 LOC106573403 other downstream 464645 35273709 ~ 35278005 (-)
G36196 NA other downstream 1361418 34341562 ~ 34381232 (-)
LOC110522187 LOC106573361 other upstream 620495 36370091 ~ 36409064 (-)
G38855 NA other upstream 758939 36508538 ~ 36510829 (-)
G40079 NA other upstream 1966941 37716540 ~ 37717033 (-)
G40732 NA other upstream 2375681 38125280 ~ 38125725 (-)
G40768 LOC106573348 other upstream 2437889 38187488 ~ 38191736 (-)

Expression


Co-expression Network