armc10 (armc10)


Basic Information

Item Value
gene id armc10
gene name armc10
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 35971331 ~ 35982887 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600276.2
GCCAACAACACATACTTGAAACTCATGAACAAGGAACTCCCGTGAAAGCAGCTGGGCGGCCATTGGGGGAAAAGTGTACGGACAAGCTAAATTGTCATCTTCAACCTAGCTCGTAGCGTGTGTGCAAAATGAGTTAAATTCGTCATAATCTTTAGTTTGGCTAGATGATTCACTTTAAAGATCTGTATTTAGTATTTGAATATCTGTTCATGCGTTTCACTGAATTTCCAGCATGGGCGATGGCAGTGTCATACCCAAGTTCGGTAGTATGAAGGCTTTGCTTGGGATAGTCGCCGGGGCTGGAGCCTCCTACGGGATTTATAAACTTCTCAGTGTAACTAGCTTCAAGGAAAATAAAAAAAGTGCCTACAGCGAAAGTCATGGCCCCAAGAATAACTCACCCGGTGGTATAGTTCTGCAGCCAGGGAGCTTGTTAGCTAAGGTGTCCGGGTTGGATGTGGTTCGTGGAGGCGAAAGTCAGGCCGTGGATGTTGCATCAAGTGACATCATCTCTAGATCACCTGGAAGCCTGGAGCCACAACACCTGAAGATGCTCCTGTCACTTCTTCAGGGCAGCCCCAACCCCTCTGACAGAGCCCAGATCCTCATCACTTTAGGAAATACTGCTGCCTTCACTGTAAACCAGgaTCTCATCCGTGAGTTTGGGGGCCTTCACGTCATAGCTGGCTTCCTGTCAGATCCTGTGCCAGAAGTCAGAGTGCAGACTCTAAATGCCTTGAATAACCTGAGCATGAACCTTAGGAATCAAGAGCAACTGAAGGTGTACGTGGCCCAGGTGCTGGAACTAATCGAGATGTCTCCGGTGAACTCTGACCTCCAGATGGCTGCCCTCCGGCTGCTGACCAACCTGTCCGTCACAGATGACCACCACCAGCTACTCAGGGGGTCCAtcaccctcctcctttctctgctCGTTGTTAGCAATCAAGTGTTACAGATCCAAGTTTTAAAAGTGCTTGTGAATTTATCCTCCAATCCTGATATGATGGATGACATAGTGCAAGCTCAGGCTCCAGCCGCTGTGGTGCTGCTGTTTGACGTGCGGACCAGCTCGGCGGTTCTCCTGCGGCTGCTGATGTTTGCAGGGAACTTGAAGGCCTGGAGGCCTTCTGCCCAGGTGGCGGAGGctctgaggaggagacaggatgGCCTGTACCGGGTCCTGCTGGATGAGTCCTCCCAGCTGCAAAGCAAACTGATCCAGCTTCTCTCTCACCCCGACGGCGAGGTCCGAGCCCAGGTGGCCCGTGTCCTCTTGTAGACCCCCATACCGAACCTCAAATCCCGACACAACCTCTCTTACCTATATTATTAATTTAACCTCCAACTCCAACTTGATTTTTTCCCAACCTTGACTCCTTTAACCTCCTGTTCCTCCAATCTTCCCAATCCCCAGTTCTCCTTAATCATGCCACCAAACATACATCCTACTTTCAAACCTCCACCCTCTTACCTCCACAACCAGACTTAATCAATCTGCCCAGGCCTGCCCGTGCCTTCAAACACCACCCTGCCCTTCACCCCTTCTGCCAATTTCTACCCAATCTGTGTCCTACTTCTCCACTCCAAACCTCAACCAAACCATCATAAACCTTCACTTCAGTAAAGTCCCCTACAGCCATTGGAAATCTATCCAATTATCTACCGATCAGTGATCATAAAGGAAGGAAGGAGGTGAGGTGGAGAGGAAGCCATTTAATAGTATTGAGACTCgggccacctctccctcccctcccactcctccttcaCTTAGGCTGTAATTTTAGGCTGTATTTAAAGAGGCAGCGCTCCACATCcactgtgtctttctctctcctgagaACATGTTGTCCACTTTCTCCTGTTCTAGGCGAAGCCCCTTAACTGAAACCCACTGCCAAAACCTTTCAAGCAAGGAGAATGTGTCAGTAATATGCCCTCCAACACCTCACCCAACTAACTGCCCCTGCGTGGTGTGCTGTGCATATGTAATGGAGTTGGTTTGGTGAACCACACTTGCATGATGTGTAAACTTGCCTGAGAGCTGAAGACTTGCAATTGCTCCCCGACCTAATACCTAGGCTTTAACAGAGTGGGCTAACACATCTTGTGGAGGAGACAATCTGGAGAGGCTGGCCAATCGTTACTGTACTTTGAAGTTACTTGATGCACACAATTTGAATGCCTTGTTGACACCAGTACAGGGATACACAGCTCCAGTCTTCGACTGTCAAGTCTTGCCCTCTTAAACTATCAATCAGTAACTGATTTACACCTGGGAATCAAAGGTCAAGTTAGGTATATCTGAAATGTGTGCACTAGCAGCTTAACGCTTTCAAGCGGAACGAGTACTCCCTGCAGACTGCTTAAATAAATTATAGGCTGAAACATTCCGTGACTTGAATTGTTTGTTTAAAGCACTGAGATAAGAAAGATGACAACCAGCTCATCTCAGGCTTCCTATAAAATCATACAGCTGTTGAATGAGACTGAGCCAGGTCAGACCTGAGAGGACTGGAGTTATGGACCCCTGGTGCTGGTATGTCACACACCGTAGACCGTTTACAGAGGAGCGAGGGAGACTACTGTCACTGATCTCTTGTTTGTATGACTCAATAAATGTCAATGGGGTTTTCCCTGATCCAACAGCATTCACATCATCCAAATGGGATTTTTTAGCATTGATCTCATAAGACATGAGCTGAGGCTGATTTGAAGTATAGGCTGCACTGTACTAGGTTTCTCCAACTCCCAGCACATAGTTCAGGTAACTGTGATTGAAGACCATGACTggttcagtgtttcccctacccATGGtttcccccctccaccctgtatAGTTGTCCCTGTCTCAACAATTTAGGTGCCAAAAGGCCTGGATGTGGCTTTGGGGGCCTTTGCGCTCCACCTGGAAAGTAATCTAGGGGGAAGActggataaatatatatattatttttagatAGGTGTGTCAGTGCTGGTCTGGAACAATAGCCTGCACACCCAGAATTTCTCTGGGACTGGAGTTAGACCTCTCTGGTCTGTACAAATGCTGCAAAATTCTGATGTCGAGAGACTCCGTGTCAGACCCAAAACTATCTCTTCTCCCAGGCTTTTGTGTTTAAGAGCagagatgggaagatggatgtgtATTTTTAATCAGTACCAACGGTAGCATCCCCTTGTGTAAAGCTTATCTGCTACAGTTATTCAGGAAATATTTATTTTGGATTATTCAGTTGTTTCTTGTTTCAACCCAGTTTTGGCCTTCTTAATGTAtagatttgttttgtttgttttacatttgtgagtaaatatgttttattttaaaggtgactgcctccatctctccatgcCTCATTGTTTGAGCTTGTTATAAATGAAAAGTTGAGGTTCCTTTATTTCCAGTAAAATACGATGTGCAATCTATGCCCTCTAGTGTTGAAGCTGGTAAGTGGTTCAAAGCCAGCATATTATTATGGCACTGTCTGGGTTTCTCTGACCAAGAGGAAGGGGAAAGGTTTGTGAATGCTCCCCCCCACATAGCAAAATATTATTCATGTTTTCATTCTAATACAACTCTTTCCACAAA
>XM_021600283.2
agaacaacagatgtttagcttgtcagctcggggattcaacgttctaaccactaggctacctgcctccccaattATACCTGAAAATGTACAATTATTTGTATAAAACTAAGTGAAATACGACTCAGACTCATCCTCTGGCTTATAAACAGAAGTCCAAACTCTCGTGGTAAGGTGACATCATCTCTAGATCACCTGGAAGCCTGGAGCCACAACACCTGAAGATGCTCCTGTCACTTCTTCAGGGCAGCCCCAACCCCTCTGACAGAGCCCAGATCCTCATCACTTTAGGAAATACTGCTGCCTTCACTGTAAACCAGgaTCTCATCCGTGAGTTTGGGGGCCTTCACGTCATAGCTGGCTTCCTGTCAGATCCTGTGCCAGAAGTCAGAGTGCAGACTCTAAATGCCTTGAATAACCTGAGCATGAACCTTAGGAATCAAGAGCAACTGAAGGTGTACGTGGCCCAGGTGCTGGAACTAATCGAGATGTCTCCGGTGAACTCTGACCTCCAGATGGCTGCCCTCCGGCTGCTGACCAACCTGTCCGTCACAGATGACCACCACCAGCTACTCAGGGGGTCCAtcaccctcctcctttctctgctCGTTGTTAGCAATCAAGTGTTACAGATCCAAGTTTTAAAAGTGCTTGTGAATTTATCCTCCAATCCTGATATGATGGATGACATAGTGCAAGCTCAGGCTCCAGCCGCTGTGGTGCTGCTGTTTGACGTGCGGACCAGCTCGGCGGTTCTCCTGCGGCTGCTGATGTTTGCAGGGAACTTGAAGGCCTGGAGGCCTTCTGCCCAGGTGGCGGAGGctctgaggaggagacaggatgGCCTGTACCGGGTCCTGCTGGATGAGTCCTCCCAGCTGCAAAGCAAACTGATCCAGCTTCTCTCTCACCCCGACGGCGAGGTCCGAGCCCAGGTGGCCCGTGTCCTCTTGTAGACCCCCATACCGAACCTCAAATCCCGACACAACCTCTCTTACCTATATTATTAATTTAACCTCCAACTCCAACTTGATTTTTTCCCAACCTTGACTCCTTTAACCTCCTGTTCCTCCAATCTTCCCAATCCCCAGTTCTCCTTAATCATGCCACCAAACATACATCCTACTTTCAAACCTCCACCCTCTTACCTCCACAACCAGACTTAATCAATCTGCCCAGGCCTGCCCGTGC

Function

symbol description
armc10 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in head and otic vesicle. Orthologous to human ARMC10 (armadillo repeat containing 10).

NR:

description
armadillo repeat-containing protein 10

GO: NA

KEGG:

id description
K24167 ARMC10; armadillo repeat-containing protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600276.2 False 3589 mRNA 0.47 6 35971331 35982648
XM_021600283.2 True 1188 mRNA 0.51 6 35973403 35982887

Neighbor

gene id symbol gene type direction distance location
cax2 LOC106573379 coding downstream 9918 35939742 ~ 35961413 (-)
LOC110522154 LOC105022174 coding downstream 56819 35892507 ~ 35914512 (-)
LOC110521997 LOC100196677 coding downstream 217983 35750305 ~ 35753348 (-)
LOC110522006 LOC106573384 coding downstream 221732 35742650 ~ 35749599 (-)
LOC110532260 NA coding downstream 276555 35433794 ~ 35694776 (-)
LOC110522092 lrrc17 coding upstream 22615 36005053 ~ 36045196 (-)
fam185a fam185a coding upstream 54650 36037537 ~ 36047583 (-)
LOC110522040 LOC106573374 coding upstream 84059 36066946 ~ 36070858 (-)
LOC110532269 LOC106573375 coding upstream 92063 36074950 ~ 36080429 (-)
tmem60 LOC106573373 coding upstream 136384 36119271 ~ 36120989 (-)
G38119 NA non-coding downstream 28064 35942686 ~ 35943267 (-)
G38147 NA non-coding downstream 28727 35942360 ~ 35942604 (-)
G38139 LOC106573381 non-coding downstream 79672 35888587 ~ 35891659 (-)
G38126 NA non-coding downstream 107869 35862825 ~ 35863462 (-)
G38224 NA non-coding upstream 123717 36106604 ~ 36107897 (-)
G38229 NA non-coding upstream 125511 36108398 ~ 36108872 (-)
G38269 NA non-coding upstream 208276 36191163 ~ 36191567 (-)
G38223 NA non-coding upstream 243815 36226702 ~ 36231191 (-)
G38045 LOC106573386 other downstream 249275 35721440 ~ 35722056 (-)
G37976 NA other downstream 387723 35583292 ~ 35583608 (-)
G37907 NA other downstream 530003 35440918 ~ 35441328 (-)
G37310 LOC106573403 other downstream 693326 35273709 ~ 35278005 (-)
G36196 NA other downstream 1590099 34341562 ~ 34381232 (-)
LOC110522187 LOC106573361 other upstream 387207 36370091 ~ 36409064 (-)
G38855 NA other upstream 525651 36508538 ~ 36510829 (-)
G40079 NA other upstream 1733653 37716540 ~ 37717033 (-)
G40732 NA other upstream 2142393 38125280 ~ 38125725 (-)
G40768 LOC106573348 other upstream 2204601 38187488 ~ 38191736 (-)

Expression


Co-expression Network