fam185a (fam185a)


Basic Information

Item Value
gene id fam185a
gene name fam185a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 36037537 ~ 36047583 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600264.2
TTCCCTCACCCGGAAGTACTTAGACGCTGACAGTGAATGACGAGAGGCTGGTTTATTTTTGGACAGGGGAAAAACACAGTGGTTCTAAACCTGTATTTGGTTAGAATATCACCTAAGGAACTTGTTTCATCATCCTTTGGCCAAAAGTATTGTCTTCCCGTAGGACGTGGAGCGTAACGCAACGGAGTTCCGCGCCGCAATAAAGGAGCCCTGGTGCAAATGTTTAAGTCTTTTCAAGACTGTTTATGATCTGTGACCGTGATGTTTTGTTGTTCCGCGAACCAACGTATAAGTCTCGGACTTCTATGCTGGAGGTCTCTGGCAGCGTGTCCAAATAacctccaagactcttccttgttGATTCTGAAGGCGTTCTCGACCTCGCCCCGCTCTTCAACCAAGAAAGAGGCGAGCAAACCCTTGAAGCAGTGGACTCTTGTTGTTAACCCCTTCAGCAAAGTACGGGTTCAGCTCCAATGTGACATCTCCGTACGACCTCTGGACCCGCACGCTTTCCCCGAGGCGAACCGGGCCTTCATCACCATTCATGGCACCAGCGCAGATCAAGCTGTCCAACTAGACAACTTCCAGGTGCACTATGATGACCAAAACAAGGAACTGTCCATCTTGTCCGAGGTCAAAAACAGCAACGTGTCAGTGGAGCTGACCGCTCCCATCAAAAGCGaccttTACATCACCACTCAAGGAGAGGGCAACGTGCATGTCCAGAAGATGGAGTGTGATACCTGCAGGgtgcagacagagagggggaattGTGTGCTGCACTCAGTCAAGGGTCACCAGGTGCAGGTCCAGTCCCAGGGGGGCAACGTCACTGGGGTGGGAACCATCCATGGCAATGTGGACATCAGCACATCTGGACACAGTGCGGTGAATGTGAAGAAGATCCAGGGTACTACTATGAACGTGTCGACAGAACATGGCCCTCTGAAGGTGAAAGCCATCTACGCTGAGTCCACCTCCATATCGTCCTCTTCAGGGAGGATACAGCTGGGACACATACATGGCGATGCCACAGTGCGGAATGAGACTGGAGATATAATTGTAGATGGTTCTAACAATGGCTACCTGAAGGTGTCGTCAAAGAGTGGAAACATTGATGCATATGTAGGAGACAATGGCAGTGCAGAACTCCACTCTCAGCAAGgtgCAGTGTCTGTGCGTGTCCCCTCCTCTATAAGAGCAGGAGTGCAGCTGTGTGGAATGTCAGTAGAGATCAGCCCAGAGATAGTCCTTCAGCAAGCAGAGAGAGATTCGAAAGATAGCATGACTACTGTCACTGGCCATATGAATGGGCAACTCCAGGGTGACCAGTGGATCAGGGCCCAGGCAGACAGAGGCTCCATCACCCTGAAGGCACAGAGCTGGTTTGAGTCTCTGAAGCTGGGCAGCTGAGGCTTCACTGCTACGCCCCATTCCAAAAATGtcctacctacagtgccttgcgaaagtattccgcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtattttttttt

Function

symbol description
fam185a Orthologous to human FAM185A (family with sequence similarity 185 member A).

NR:

description
protein FAM185A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600264.2 True 1552 mRNA 0.50 8 36037537 36047583

Neighbor

gene id symbol gene type direction distance location
LOC110522092 lrrc17 coding downstream 5358 36005053 ~ 36045196 (-)
armc10 armc10 coding downstream 54650 35971331 ~ 35982887 (-)
cax2 LOC106573379 coding downstream 76124 35939742 ~ 35961413 (-)
LOC110522154 LOC105022174 coding downstream 123025 35892507 ~ 35914512 (-)
LOC110521997 LOC100196677 coding downstream 284189 35750305 ~ 35753348 (-)
LOC110522040 LOC106573374 coding upstream 19363 36066946 ~ 36070858 (-)
LOC110532269 LOC106573375 coding upstream 27367 36074950 ~ 36080429 (-)
tmem60 LOC106573373 coding upstream 71688 36119271 ~ 36120989 (-)
LOC110522098 LOC106573370 coding upstream 74087 36121670 ~ 36131381 (-)
LOC110522050 LOC106573365 coding upstream 93468 36141051 ~ 36189706 (-)
G38119 NA non-coding downstream 94270 35942686 ~ 35943267 (-)
G38147 NA non-coding downstream 94933 35942360 ~ 35942604 (-)
G38139 LOC106573381 non-coding downstream 145878 35888587 ~ 35891659 (-)
G38126 NA non-coding downstream 174075 35862825 ~ 35863462 (-)
G38224 NA non-coding upstream 59021 36106604 ~ 36107897 (-)
G38229 NA non-coding upstream 60815 36108398 ~ 36108872 (-)
G38269 NA non-coding upstream 143580 36191163 ~ 36191567 (-)
G38223 NA non-coding upstream 179119 36226702 ~ 36231191 (-)
G38314 NA non-coding upstream 232765 36280348 ~ 36281267 (-)
G38045 LOC106573386 other downstream 315481 35721440 ~ 35722056 (-)
G37976 NA other downstream 453929 35583292 ~ 35583608 (-)
G37907 NA other downstream 596209 35440918 ~ 35441328 (-)
G37310 LOC106573403 other downstream 759532 35273709 ~ 35278005 (-)
G36196 NA other downstream 1656305 34341562 ~ 34381232 (-)
LOC110522187 LOC106573361 other upstream 322511 36370091 ~ 36409064 (-)
G38855 NA other upstream 460955 36508538 ~ 36510829 (-)
G40079 NA other upstream 1668957 37716540 ~ 37717033 (-)
G40732 NA other upstream 2077697 38125280 ~ 38125725 (-)
G40768 LOC106573348 other upstream 2139905 38187488 ~ 38191736 (-)

Expression


Co-expression Network