tmem60 (LOC106573373)


Basic Information

Item Value
gene id tmem60
gene name LOC106573373
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 36119271 ~ 36120989 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600311.2
GATTGACAGAGAATGGCCAATCCTAGTGGATAATAGCATggtaaaaaacatgtttttaataaCGACAACCGGAAGATCCCCTAGACACCTTTCGTTTTTATCGTAACGGAAAGTGCAATAAAATACAAGCTTTTCGATAATATGGATTTTAAAGATACTTAGGTGACAAATCCTCCGATCCAGGTTCGTCTCACTCTTGACTTGCCAGTGCCACAGTGTTAACGTTCCCCCTCCAGGGCACCACCCCCATCCCTTAAATGAGAATGTCTCTGGCCCAAAGAGTCCTCCTGACCTGGATCTTCTCCCTCATCTTCCTCATCATGCTGGTCCTCAAACTGGATTCCAAGATCCCCTGGAACTGGTTCCTCATCTTCCTCCCCGTATGGATTTTTGACACCATCCTCATCCTCATGCTCGTGGTAAAGATGGCGGGTCGGTGCAAGCCCGGCTATGACCCGCGTGGAGGCCAGCAGAACCTGCGACGGAGGGTGTGGTACCTAGTGGCTATGTTGCTGAAGCTGGGCTTCTGTCTGACGCTGTGCGCCCGGCTGGAGAGGCTGATGGAAATCTggctcagtgtggtgtgtgtcccCCTCTGGGCCCTGCTGGTCGGGGCCATGGTGGAGCTGGGCTACAGTGTCTTTCACTACCGCAGAGagtgagaggatggagagggagaaagatggagattGATTTTATTTGCTCCGTCTAGGATATAAAGACTGCAAGTTAGTCTGTAGGGGAGATGAATGTGAGATTGTTGTAATCCACTGTAGGAGAAACTGAACTGAAGAATATGGAGATGAAAACATTTTCATTTTCACTACAGCAAAGACTGAAAGAATGGGGGGGAGATGGAAAAGGGAATTGATTTAGTTTACTCCACTAGTACAGTATGTAAAGACCACTACAAGAGAGACTACTACAAGAGCGAATAGTGATATGGCAATATATTTTATGGGTTTATGCTGCTTACAaatgtaatctttatttaaccctAGTGATACAGCAAGAAATGTTGCAGCCATGTTGGTCTTTGCCATGATGGACTCTGGATGAGAATTCAGGGTATTCATAAGCAGACTGGACCtcctgacagactgactgatctGTGCATGTGCCTTTGTTACTCTCAGATAACTGGGACCGTTAGGTCCAATGGGTTTATATGTGAACATTAATTATGTGTCTTTTGAAGTGGTAGGGATCTGTTTTTCTGTGGATacggagaaacacacacaaaaataaatatttacaaTTCCTCAACTTTGTTGGATTGGTG

Function

NR:

description
transmembrane protein 60-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600311.2 True 1282 mRNA 0.45 2 36119271 36120989

Neighbor

gene id symbol gene type direction distance location
LOC110532269 LOC106573375 coding downstream 38842 36074950 ~ 36080429 (-)
LOC110522040 LOC106573374 coding downstream 48413 36066946 ~ 36070858 (-)
fam185a fam185a coding downstream 71688 36037537 ~ 36047583 (-)
LOC110522092 lrrc17 coding downstream 87092 36005053 ~ 36045196 (-)
armc10 armc10 coding downstream 136384 35971331 ~ 35982887 (-)
LOC110522098 LOC106573370 coding upstream 681 36121670 ~ 36131381 (-)
LOC110522050 LOC106573365 coding upstream 20062 36141051 ~ 36189706 (-)
LOC110522124 fbxl14 coding upstream 110498 36231487 ~ 36234308 (-)
LOC110522087 NA coding upstream 140199 36261188 ~ 36264106 (-)
LOC110522167 LOC106573363 coding upstream 169717 36290706 ~ 36322277 (-)
G38229 NA non-coding downstream 10399 36108398 ~ 36108872 (-)
G38224 NA non-coding downstream 11374 36106604 ~ 36107897 (-)
G38119 NA non-coding downstream 176004 35942686 ~ 35943267 (-)
G38147 NA non-coding downstream 176667 35942360 ~ 35942604 (-)
G38269 NA non-coding upstream 70174 36191163 ~ 36191567 (-)
G38223 NA non-coding upstream 105713 36226702 ~ 36231191 (-)
G38314 NA non-coding upstream 159359 36280348 ~ 36281267 (-)
G38345 NA non-coding upstream 211170 36332159 ~ 36333002 (-)
G38045 LOC106573386 other downstream 397215 35721440 ~ 35722056 (-)
G37976 NA other downstream 535663 35583292 ~ 35583608 (-)
G37907 NA other downstream 677943 35440918 ~ 35441328 (-)
G37310 LOC106573403 other downstream 841266 35273709 ~ 35278005 (-)
G36196 NA other downstream 1738039 34341562 ~ 34381232 (-)
LOC110522187 LOC106573361 other upstream 249105 36370091 ~ 36409064 (-)
G38855 NA other upstream 387549 36508538 ~ 36510829 (-)
G40079 NA other upstream 1595551 37716540 ~ 37717033 (-)
G40732 NA other upstream 2004291 38125280 ~ 38125725 (-)
G40768 LOC106573348 other upstream 2066499 38187488 ~ 38191736 (-)

Expression


Co-expression Network