pdhx (pdhx)


Basic Information

Item Value
gene id pdhx
gene name pdhx
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 37287556 ~ 37347643 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036977062.1
aACAAACGCACACACTCAATTACACATTGgcttcccctgcctgttcggATTAAGAGAGTGAGGGTTATGAATGGGAGGTTTCAGCGGGTGTGCTTTCAGGGCATTGTTGTGCAGATATGTGCTCATCCAGGCCTGAGTTCTTCACACATGACATGCAGAGCAGAAGGAGACCTTCGTACATGAACGGCAAAAACAACACATGAACAACAACACGAGCACCAGAACATGAGGTTCCCTCTGTTCACACACAGCCATGGCTCATCACCATGTATCATTCGGGCCTTGCAAGCCATTTTTAATCCGCTAGTTCTATCTAAAGGTCTGTATTCTAGCATTTGTCATTCTAAGGCAGCAAAACATTGTAATACTCAGTATTACAAGGAGGTGACTTAGTTGGGCATTAGCATGGCCAGCCCAATGCCTACATGACCCTGAGCCAGCTGAACTGTTGTCTTCTGAGTGGCTCTAGCTGCTGTGGATGGCTAGGTCCCAGGCTGTGGTGGCCCAGTGGGTGACAGGGCTACCAGCCCGAGGTGCTGCACCAGTCAAAGTGGAGatgcctgctctctctcccaccatggAGGAGGGAAACATTGTCAAATGGTTGAAGAAAGAAGGTGATGCGGTAGCGGCTGGCGATGCGCTCTGTGAGATCGAGACGGACAAGGCCGTGGTTACCCTGGAGTCCAGTGATGAcggcgtcctggccaagatactGATGGAGGAGGGCAGTCGTGCCGTGCGTCTGGGGACTCTCATTGCCCTCAtggtggaggaaggggaggactggAAGACAGTGGAGATCCCGCCACCTGTGGCAGCCACCCAAGCAACTCCCGCTCCGGCAGCCCCCACTGCACCCCCACCACATCCCCCCAGAGCAGCCTCCACAGGACCGTTGCGGTTGAGCCCGGCAGCCAGACACATCCTGGACACACACGGTCTGGACCCCCAGCTGGCCACCCCCACCGGACACAGGGGCATCATCACCAAGGAAGATGCCCTTAATCTCCTGAAAAAGTTCCCTGATTCCAAGACAACTCCAGTTACAGCAGCCCCAGTGGCAGCAGCCCCCAGTCCTGTCGCCACCCCAGCAGCTGCCCCACTTCCCCCAGGCAGCAGGCCCATGTACCCCCCTCAATCCATACCTGGCAAGCCTGGAGCTccggGCACCTTCACAGAGGTCCCGGCCTCTAATGTGCGGCGTGTCATCGCCCAGAGGCTGACGCAGTCCAAGACCACCATCCCTCACGCCTACGCCACCATCGACTGTGACCTGGGCGCTGTCATGCAGCTCCGCAAGGAGATGGCCAAAGCGGAAATCAAAGTGTCCGTCAATGATTTTATCATCAAGGCCGCTGCTGCTACGCTTAGAGAGCTGCCGGAGGTCAACGTGACCTGGTCGGGGGAGGGACCTCAGGCGCTGGACTCCATTAGCATCTCCATCGCTGTGGCGACCCCAAAGGGCCTCATCACCCCCATCATCACGAACGCTGCTGACAAGGGGGTGCAGGAGATCTCAGCTAATGCCAAGGCACTGGCCCAGAAGGCTCGAAATGGGAAGCTGCTTCCTCATGAGTACCAGGGAGGCTCCTTCAGTATTTCTAACCTGGGAATGTTTGGCATCAGTGAGTTCAGTGCGGTGATCAACCCTCCCCAGGCGTGTATCCTGGCTGTGGGAACATCAAGGGCTGTGCTGCATCTGACCGAGGAGACCGGTGCCCTGAGCACCCAGCAGCTGATGACCGTCACCCTGTCCAGCGATGGGCGCCTTGTGGACGACGAGCTGGCATCACGCTTCCTGGACAAGTTCCGTGCCAACCTGGAGCGGCCACAGCGCATGACACTGAACtgagagggggatgaagaggaAGTGAAGGAGAGCAAGGGAAACACTTCCATCATGAAGCCTATTTCATGCTTGTAAGAGAAGCGGTCAGACAGTTAATTTAAGTTAATTTTAACTAAATGACCATTGTCAATGCACATTTCAATATTAGGTGTGCTATTGGCCTGTACATAGTATATAGTCGTTTTGACTGTTTATGACCTATGCTATGTCCGGATCATCACTCCTAAGGCTTTGGGATGGAGGTGTGTAAGTGTACTATTGCTGCAGAGGTCTATGTTCTGTAGTGGAGCCCCAGACAAATGTTACCATAACAGGGTACGTCTCAGTTAACCTGAGGGAGGTTGGAGCTGCATGGGAGCTATTCTAACACACCATGTTGGTATCTAAAGTGGCTATTCCAGTCCCATATATCAAGTCCCAATGCAACGACCCATGTCACAATTAGTTCTCATTCTTTCACCTGGATAATTCTAACATGTTTTTGTACATTTCTTTTGTGTTTATTATGGGCCATCAAAGCACTGCATTTCTTCTGTGCAACTCATTCTACCCCTGACAGAGTGAGTGGCACTTTGAAATTCCTCTGAACATTCTGACTGTTGTGATTTTTGGGTCTCCTGATAGGTTGAGGAAAGCAAACAAGTCCACTGATATCTCTCACGATTGTGCGTATGAAAGGTTTTAACTTATTTAAATACAAATGTAGTCTATCATAACCATCCCCAAAACAGATATATATATTGACAAAGCAAACCAATAAATTGCATTCAACTCACAAAA
>XM_021600666.2
AACTACAAGTTCATGACAGAGGAAGACTACAAAGAAGGACCTCAAAGATCCAAGAAGGACGTCTTTGGCATTTAGTTTTATAGGAGAGTTGCAGTCAAATAGTAATCTTGATGAATGTATATCTGTCTAGTCACATGGCTCATTTTACATCGTATATAAACTATTCCACGTAATGGCTTTGTGTTGTACCACTTTACGGTTTATTTTCTTTACTCTTATCACCTGTCAGGCATAAACTTGGGCAGCTCTTACCGACTGAGGACGAAAACATGGCGGCCTCCTTGCGTTTGGGTCGTCAAGGAATTCTATTTGGCCTGAGATTTGCAAAgcttaaaaaaaaatcctggacTTCATATTCGTTTCAGGACAATGTCAGGCAGTTCTTTCAATCGCCATATTTCTTTGGTGCTGCACCAGTCAAAGTGGAGatgcctgctctctctcccaccatggAGGAGGGAAACATTGTCAAATGGTTGAAGAAAGAAGGTGATGCGGTAGCGGCTGGCGATGCGCTCTGTGAGATCGAGACGGACAAGGCCGTGGTTACCCTGGAGTCCAGTGATGAcggcgtcctggccaagatactGATGGAGGAGGGCAGTCGTGCCGTGCGTCTGGGGACTCTCATTGCCCTCAtggtggaggaaggggaggactggAAGACAGTGGAGATCCCGCCACCTGTGGCAGCCACCCAAGCAACTCCCGCTCCGGCAGCCCCCACTGCACCCCCACCACATCCCCCCAGAGCAGCCTCCACAGGACCGTTGCGGTTGAGCCCGGCAGCCAGACACATCCTGGACACACACGGTCTGGACCCCCAGCTGGCCACCCCCACCGGACACAGGGGCATCATCACCAAGGAAGATGCCCTTAATCTCCTGAAAAAGTTCCCTGATTCCAAGACAACTCCAGTTACAGCAGCCCCAGTGGCAGCAGCCCCCAGTCCTGTCGCCACCCCAGCAGCTGCCCCACTTCCCCCAGGCAGCAGGCCCATGTACCCCCCTCAATCCATACCTGGCAAGCCTGGAGCTccggGCACCTTCACAGAGGTCCCGGCCTCTAATGTGCGGCGTGTCATCGCCCAGAGGCTGACGCAGTCCAAGACCACCATCCCTCACGCCTACGCCACCATCGACTGTGACCTGGGCGCTGTCATGCAGCTCCGCAAGGAGATGGCCAAAGCGGAAATCAAAGTGTCCGTCAATGATTTTATCATCAAGGCCGCTGCTGCTACGCTTAGAGAGCTGCCGGAGGTCAACGTGACCTGGTCGGGGGAGGGACCTCAGGCGCTGGACTCCATTAGCATCTCCATCGCTGTGGCGACCCCAAAGGGCCTCATCACCCCCATCATCACGAACGCTGCTGACAAGGGGGTGCAGGAGATCTCAGCTAATGCCAAGGCACTGGCCCAGAAGGCTCGAAATGGGAAGCTGCTTCCTCATGAGTACCAGGGAGGCTCCTTCAGTATTTCTAACCTGGGAATGTTTGGCATCAGTGAGTTCAGTGCGGTGATCAACCCTCCCCAGGCGTGTATCCTGGCTGTGGGAACATCAAGGGCTGTGCTGCATCTGACCGAGGAGACCGGTGCCCTGAGCACCCAGCAGCTGATGACCGTCACCCTGTCCAGCGATGGGCGCCTTGTGGACGACGAGCTGGCATCACGCTTCCTGGACAAGTTCCGTGCCAACCTGGAGCGGCCACAGCGCATGACACTGAACtgagagggggatgaagaggaAGTGAAGGAGAGCAAGGGAAACACTTCCATCATGAAGCCTATTTCATGCTTGTAAGAGAAGCGGTCAGACAGTTAATTTAAGTTAATTTTAACTAAATGACCATTGTCAATGCACATTTCAATATTAGGTGTGCTATTGGCCTGTACATAGTATATAGTCGTTTTGACTGTTTATGACCTATGCTATGTCCGGATCATCACTCCTAAGGCTTTGGGATGGAGGTGTGTAAGTGTACTATTGCTGCAGAGGTCTATGTTCTGTAGTGGAGCCCCAGACAAATGTTACCATAACAGGGTACGTCTCAGTTAACCTGAGGGAGGTTGGAGCTGCATGGGAGCTATTCTAACACACCATGTTGGTATCTAAAGTGGCTATTCCAGTCCCATATATCAAGTCCCAATGCAACGACCCATGTCACAATTAGTTCTCATTCTTTCACCTGGATAATTCTAACATGTTTTTGTACATTTCTTTTGTGTTTATTATGGGCCATCAAAGCACTGCATTTCTTCTGTGCAACTCATTCTACCCCTGACAGAGTGAGTGGCACTTTGAAATTCCTCTGAACATTCTGACTGTTGTGATTTTTGGGTCTCCTGATAGGTTGAGGAAAGCAAACAAGTCCACTGATATCTCTCACGATTGTGCGTATGAAAGGTTTTAACTTATTTAAATACAAATGTAGTCTATCATAACCATCCCCAAAACAGATATATATATTGACAAAGCAAACCAATAAATTGCATTCAACTCACAAAA
>XM_021600676.2
AACTACAAGTTCATGACAGAGGAAGACTACAAAGAAGGACCTCAAAGATCCAAGAAGGACGTCTTTGGCATTTAGTTTTATAGGAGAGTTGCAGTCAAATAGTAATCTTGATGAATGTATATCTGTCTAGTCACATGGCTCATTTTACATCGTATATAAACTATTCCACGTAATGGCTTTGTGTTGTACCACTTTACGGTTTATTTTCTTTACTCTTATCACCTGTCAGGCATAAACTTGGGCAGCTCTTACCGACTGAGGACGAAAACATGGCGGCCTCCTTGCGTTTGGGTCGTCAAGGAATTCTATTTGGCCTGAGATTTGCAAAgcttaaaaaaaaatcctggacTTCATATTCGTTTCAGGACAATGTCAGGCAGTTCTTTCAATCGCCATATTTCTTTGGTGCTGCACCAGTCAAAGTGGAGatgcctgctctctctcccaccatggAGGAGGGAAACATTGTCAAATGGTTGAAGAAAGAAGGTGATGCGGTAGCGGCTGGCGATGCGCTCTGTGAGATCGAGACGGACAAGGCCGTGGTTACCCTGGAGTCCAGTGATGAcggcgtcctggccaagatactGATGGAGGAGGGCAGTCGTGCCGTGCGTCTGGGGACTCTCATTGCCCTCAtggtggaggaaggggaggactggAAGACAGTGGAGATCCCGCCACCTGTGGCAGCCACCCAAGCAACTCCCGCTCCGGCAGCCCCCACTGCACCCCCACCACATCCCCCCAGAGCAGCCTCCACAGGACCGTTGCGGTTGAGCCCGGCAGCCAGACACATCCTGGACACACACGGTCTGGACCCCCAGCTGGCCACCCCCACCGGACACAGGGGCATCATCACCAAGGAAGATGCCCTTAATCTCCTGAAAAAGTTCCCTGATTCCAAGACAACTCCAGTTACAGCAGCCCCAGTGGCAGCAGCCCCCAGTCCTGTCGCCACCCCAGCAGCTGCCCCACTTCCCCCAGGCAGCAGGCCCATGTACCCCCCTCAATCCATACCTGGCAAGCCTGGAGCTccggGCACCTTCACAGAGGTCCCGGCCTCTAATGTGCGGCGTGTCATCGCCCAGAGGCTGACGCAGTCCAAGACCACCATCCCTCACGCCTACGCCACCATCGACTGTGACCTGGGCGCTGTCATGCAGCTCCGCAAGGAGATGGCCAAAGCGGAAATCAAAGTGTCCGTCAATGATTTTATCATCAAGGCCGCTGCTGCTACGCTTAGAGAGCTGCCGGAGGTCAACGTGACCTGGTCGGGGGAGGGACCTCAGGCGCTGGACTCCATTAGCATCTCCATCGCTGTGGCGACCCCAAAGGGCCTCATCACCCCCATCATCACGAACGCTGCTGACAAGGGGGTGCAGGAGATCTCAGCTAATGCCAAGGCACTGGCCCAGAAGGCTCGAAATGGGAAGCTGCTTCCTCATGAGTACCAGGGAGGCTCCTTCAGTGAGTTCAGTGCGGTGATCAACCCTCCCCAGGCGTGTATCCTGGCTGTGGGAACATCAAGGGCTGTGCTGCATCTGACCGAGGAGACCGGTGCCCTGAGCACCCAGCAGCTGATGACCGTCACCCTGTCCAGCGATGGGCGCCTTGTGGACGACGAGCTGGCATCACGCTTCCTGGACAAGTTCCGTGCCAACCTGGAGCGGCCACAGCGCATGACACTGAACtgagagggggatgaagaggaAGTGAAGGAGAGCAAGGGAAACACTTCCATCATGAAGCCTATTTCATGCTTGTAAGAGAAGCGGTCAGACAGTTAATTTAAGTTAATTTTAACTAAATGACCATTGTCAATGCACATTTCAATATTAGGTGTGCTATTGGCCTGTACATAGTATATAGTCGTTTTGACTGTTTATGACCTATGCTATGTCCGGATCATCACTCCTAAGGCTTTGGGATGGAGGTGTGTAAGTGTACTATTGCTGCAGAGGTCTATGTTCTGTAGTGGAGCCCCAGACAAATGTTACCATAACAGGGTACGTCTCAGTTAACCTGAGGGAGGTTGGAGCTGCATGGGAGCTATTCTAACACACCATGTTGGTATCTAAAGTGGCTATTCCAGTCCCATATATCAAGTCCCAATGCAACGACCCATGTCACAATTAGTTCTCATTCTTTCACCTGGATAATTCTAACATGTTTTTGTACATTTCTTTTGTGTTTATTATGGGCCATCAAAGCACTGCATTTCTTCTGTGCAACTCATTCTACCCCTGACAGAGTGAGTGGCACTTTGAAATTCCTCTGAACATTCTGACTGTTGTGATTTTTGGGTCTCCTGATAGGTTGAGGAAAGCAAACAAGTCCACTGATATCTCTCACGATTGTGCGTATGAAAGGTTTTAACTTATTTAAATACAAATGTAGTCTATCATAACCATCCCCAAAACAGATATATATATTGACAAAGCAAACCAATAAATTGCATTCAACTCACAAAA

Function

symbol description
pdhx Predicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. Predicted to be part of pyruvate dehydrogenase complex. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in pyruvate decarboxylase deficiency. Orthologous to human PDHX (pyruvate dehydrogenase complex component X).

NR:

description
pyruvate dehydrogenase protein X component, mitochondrial isoform X2

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016746 transferase activity, transferring acyl groups molecular_function

KEGG:

id description
K13997 PDHX; dihydrolipoamide dehydrogenase-binding protein of pyruvate dehydrogenase complex

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036977062.1 False 2632 mRNA 0.52 11 37287556 37342075
XM_021600666.2 False 2504 mRNA 0.51 11 37287556 37347643
XM_021600676.2 True 2474 mRNA 0.51 11 37287556 37347643

Neighbor

gene id symbol gene type direction distance location
LOC110522333 NA coding downstream 38732 37212420 ~ 37248824 (-)
LOC110522309 LOC106573353 coding downstream 255903 37028885 ~ 37031653 (-)
trim44 LOC106573354 coding downstream 334585 36884472 ~ 36952971 (-)
ldlrad3 LOC106573355 coding downstream 460275 36712864 ~ 36827281 (-)
LOC118966750 NA coding downstream 646447 36641055 ~ 36641109 (-)
LOC110522348 LOC106573397 coding upstream 32925 37380568 ~ 37397634 (-)
LOC118966683 NA coding upstream 323206 37670849 ~ 37675533 (-)
LOC118966685 NA coding upstream 328738 37676381 ~ 37681639 (-)
LOC118966688 NA coding upstream 335001 37682644 ~ 37687745 (-)
LOC118966689 NA coding upstream 341107 37688750 ~ 37693851 (-)
G39618 NA non-coding downstream 11856 37275462 ~ 37275700 (-)
G39575 NA non-coding downstream 85199 37199485 ~ 37202357 (-)
G39572 NA non-coding downstream 90120 37197158 ~ 37197436 (-)
G39502 NA non-coding downstream 90908 37077411 ~ 37196648 (-)
G39495 NA non-coding downstream 215674 37071634 ~ 37071882 (-)
G39706 NA non-coding upstream 61559 37409202 ~ 37409826 (-)
G39711 NA non-coding upstream 71519 37419162 ~ 37419471 (-)
G39773 NA non-coding upstream 123671 37471314 ~ 37471527 (-)
G39812 NA non-coding upstream 151205 37498848 ~ 37499276 (-)
G39843 NA non-coding upstream 174819 37522462 ~ 37522710 (-)
G38855 NA other downstream 776727 36508538 ~ 36510829 (-)
LOC110522187 LOC106573361 other downstream 878537 36370091 ~ 36409064 (-)
G38045 LOC106573386 other downstream 1565500 35721440 ~ 35722056 (-)
G37976 NA other downstream 1703948 35583292 ~ 35583608 (-)
G37907 NA other downstream 1846228 35440918 ~ 35441328 (-)
G40079 NA other upstream 368897 37716540 ~ 37717033 (-)
G40732 NA other upstream 777637 38125280 ~ 38125725 (-)
G40768 LOC106573348 other upstream 839845 38187488 ~ 38191736 (-)
G41868 NA other upstream 1674162 39021805 ~ 39022025 (-)
tspan9a LOC106573177 other upstream 5691085 42852829 ~ 43129052 (-)

Expression


Co-expression Network