LOC118966685


Basic Information

Item Value
gene id LOC118966685
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 37676381 ~ 37681639 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989498.1
ggactcattccctcccaaactaaaaggagaaaccaatgttttctctggtaggcacaacctacctggcacccctataaaaaataacctcaagtcaaaaccgttacataaAAAATGGCACCCCAGATGGGACAGCTCAACATTGAGAACTAACCAAAGCAAATATTTTGTGTGGAATTAAAACAATGGATTCACCCCAAGATAATGTGCTCATCCATTTCATACCTGTCAATGGGAATACACAGGGCCATTCTGACCATCAAGCTGACAACACAAATCATAATGGGAATGGAGATAATGGAGTTGATTTGGGCCAGAGCCCTGGGAATCTGAATGCTCGGTCTGGACCACAGGCCACAGGCGGTCTAACCAGTTACTCACTTATTGACATGGATCTGTGTGAAAGTACTGAGCCAGCCCTCCATCTGACACCCAACCTTCCTCCATTGTCTGGTTTATCTCCAGAGGTTGTAGTTTTACAACTTCAAGGTGACATCCTTGATATTCGTCGGACTCaacaacatctccaaactctTATCCACGATAAATTAAAATGTCTGAGGGAAGAGCAACAACAGAGTGCCATGGAATTCAGAAACTCACTGAGCACTCtaacccacacactgacagagctcagtGAGAGTGGAAGACGGGAAATTACTGGTGCCATGGACAGGCAGTTTCACTACCAACGAAACCAACTCACTGCCACTCTCCAATGGCGCCTGCAACATCATCACACTGAGGTCCTCAAGGACGTTAATTCTGTTTTTTCTCCCATGGTTAACACTGTAGACCACTTGCAAACAGAGCTCTCTAATTGTGTTAAAATGTTGGATGACGTGTCTGTGGACATGGCCGCCATTAGGCACAACTCCTTACACAGAGTTTCTCTGGTGTCCACTTCTGTTCAGACCACTGAGGGCCAAGCTGGCACCTCTGAAGAGCCAAGACAAGGCCATGCTACAGCCACCCCTTGCAGGATGCAATCCACCATGCATCCTGGTGTTCATTTTCATTGTCCGATAACGCCCTCCCCCTCTACTTCCTCAATCCCTCCTAGCTCGTTTGTTCATGGTGAATTGAGTAGATGTCATGTGGGGGCGATGCCCATTAAATTGCAATTTCCCACCTTTGGGAAAAAAGATGACAGTCCGGATCCGCTAATGTACCTAGAAAGATGTCGTGACTTTCTTGCCCTCAATCCCCTGGCTGACGAAGAACTCCTTGCCACATTGAGGAATGTGTTGCATGGGACAGCTCGAGACTGGTGGGATGTGGCACGTCTCACCACTACCTCCTGGGCTGACTTTGAGGCCAAGTTTTCCTCTGCATTTCTGTCTGAGGACTACACAGATGAGCTGGCAGACAGAGTCAGGAATCGAGTGCAAAGCGAGAAAGAGGGTATCCGTGACTTTGCATACGGTTACCACTCCCTGTGCAGAAGGTGGAAACCTGGcattgaggaggaagaggtcattaAATTGATTTTGAAGAACATCAACCCACTACTAGCCAGTCAACTCCGAGAACGAGTCACCACTGTCGATGGACTGGTTCGCTTGGGACAGCAGtttgagagggacagagaatgccaacagcaatatgaccaaagaAAGAAACAGACACCCAAACCGTTACCCAAGACAGACCATCAACAACAGCCAGAGTCTCAAGCCATGACCCCTCTCATGTTCTGTTGGAGATGTAGCCAAAAGGGACATTCTTCAGCTACATGTCCAAGACCGTATCACGAAAACCCTTCCAGAAACCACAAATCACAACAGgccaacacacctaactctcttcGCAGGAATGACCATCCTTCTCTGGGTGCTTTAACCAGAGCTGAAATCCCAAGAGTCACTGCCTACGCCCCCCCATCGACATCCCCTTCCTTTCAGTTCATACCGCACCAACTGGTGTTACCCCTGTCCATAGGCCCATGGACAGGAAGAGCCATCCTGGACACCGGGTCATCCTACACACTGCTCAATGAGAAACTGTGGAAGGAGGTTAAAGGTCCGCAATACAACTTGAAGCCGTGGACAGAAGGTCCACTCTATCTGGCTGATGGTGAGGCTAAACGACCACTTGGATGGAGTGAGGTAGAGTTCCGCCTGTGTAACCGCTCCTATATGATTCCTTCGGTTATCCTACAAACCAAGAACCTTGCTTTTCCTGTCGTGTTGGGAATTGATTTCATGTACTTCAGTGGTGTCCAGATTGATATCGCACACAATTGCTACTGGTTTCCATACAATCCGAGCAAGAAGCATTTCTTCCAATCAGAAGCTACGAAGTTCCATGATTGGGGTTCAAATGTAGCAGTCTTCTCTGCCGTTGCTCCGTTACCACTAACCCTTGATAATCCTTCTGACGATCTCCTTTTACAGGCTGTAAGAAGAGCTCAGCTGGAACATCCAGAGGAGTTAAGGCTGTTGGAACAGCTGCAGAATAATGCTGATGTATGTACTTCAAGGCTAGGACGCACCGGGCTCCTGAAGCACAAAATATTCCTTACACAGGAAATGCCGATCAAGCAAAAGCCATATCGTTTGTCCCCAGCAACGCTAATCATCCAAAAGGGACTCATTAATGATATGTTAACACAAGATATAATAGAACGTTCCTCCTCtccttgggctgctcctgttgtcctCATCCCAAAAAAGACTGGTGGTCTCAGATTTTGTGTGGACTATAGGAAGACCAACAATGTTTTCCAGACTGATGCCTATCCTCTTCCTACCATCCACGAGATCCTGGAGTCATTGTCTGGCGCTGTTGTGTTCACTACCCTTGACCTCAATAGTGGTTATTGGCAAGTTGAGATGGACCAGGAAAGCAAGGACAAGACTGCTTTTGTCTGTGCTGAGGGCTTGTTTTCCTTTAAGGtgatgccttttggattaaagaATGCACCTGCCACTTTCCAAAGACTGATGGAGATTGCGTTAGGTGAGCTCAAAGGGAAGATCTGTTTCGTCTACCTGGACGATATAATTATCTACTCCCAGAACAGAGAACAACACTTTCAAGATCTTCAAGCAGTGTTGGACAAGCTAAGAGAAGCTGGTCTGACCGTGAATATGAAGAAGAGCAACTTCTGCCAAACTTCCCTGAAGTTCCTTGGCCATATTGTGTCTTTCGACGGCATTCATGTGGATCCTGAAAAGACCAAGGCGGTACAAGATTTTCCTGTGCCAACCACACTCAAGGCCCTTCAACGGTTCCTTGGGATGGCTGGATGGTACCATCGGTTTGTGTCAAACTTCTCCCAGGTGGCAGAACCCCTCAACGCGTTGAAGCGAAAAGGAGTGAAATTCCTATGGACGGCAGAGTGCCAGACATCCTTTGAAACCCTGAAACGACACCTCGTCACACCTCCCATTTTAGGTCATCCCAACTTTGATTCCCCTTTTGTTGTTTACACTGATGCAAGTGATGTTGGACTTGGTGCTGTCCTAGTCCAACAGACTGGACTTGGCACTGAAGAAGTGCTAGCGTTCGCCAGTCGGACATTGAATGGAGCAGAATGGAACTACTCCACAACCGAGCAAGAGTGCCTTGCAGTTGTCTGGGCTTTGGAAAAGTGGAGGTACTACCTGGAGGGAAGACACTTCACTGTGGTCACTGACCATTCCTCCCTTGTGTGGGTGTTCAAGACCAACAAACCAAGCACCAGACTCATAAGATGGGCTCTACGGTTGCAAGAGTTCACCTTTGCAGTAGAATACAGGAAAGGAAAATACAACACTGTTCCAGATGCCTTATCCAGGGCTCCTGCTTGTGATAACGGTGGCCCTCATTTTACATGTGCTACTGTCCTGTCAAGCAGTCGAGACTCGCCCAAAACAGACTTTCCCATCTCTGAGACCATATGGAAAGCCCAACAGGATGATCCAGAAGTACAGGCTTTGTACCAGACTATCCTGGAAGATGGAGAAAAGATGGTCAATCCTACCACAAAGCTGACCATCATGGAAGACAAAGTCTACCGTGTTTGGGTGGAACTCTTTTCCCTGCGTCAGGCCACAGCAAGGACCGTCTCTAACATCCTTACGAAAGAGATCCTGACTCGCTGGGGAGTGCCTGATTACATCCTGTCTGATCGAGGTTCCCAATTTGTCTCTGATCTCTTTGAGGAGACCTGCcaaagatggaacctgagacagAAGTTGACCACGGCCTATCACCCACAGACCAATCTCACTGAGAGAGTAAATCGAACCTTGAAGACAATGATTGCTTCCTATGTAGGGACCCAGCACAAACACTGGGACAAGCACCTTCACGAGTTTCGATTTGCCCTGAATTCTGCTGTGCAAGAGTCCACTGGAGTCACACCTGCAGAGCTGAACCTAAGTCGTCCCCTCCGAGGACCCTTGGATATGGTGCTACAGCCCCAGCAGATTACTCCAGACGCTGCTTGCTATGACCAGGTAGTCCATCTCCATGACTTGAGAGCTCTTGTCTCAAAGAACATGACCCAGGCTCGACTCAAGCAGAAGAGAAATTATGATAAGAACAGACGAGACATGCAGTTTCAGCTTCGTGATCGGCTGAGGAGTGTGAGCTCCAGAAAGTGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC109094915

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989498.1 True 4589 mRNA 0.48 3 37676381 37681639

Neighbor

gene id symbol gene type direction distance location
LOC118966683 NA coding downstream 848 37670849 ~ 37675533 (-)
LOC110522348 LOC106573397 coding downstream 278747 37380568 ~ 37397634 (-)
pdhx pdhx coding downstream 328738 37287556 ~ 37347643 (-)
LOC110522333 NA coding downstream 427557 37212420 ~ 37248824 (-)
LOC110522309 LOC106573353 coding downstream 644728 37028885 ~ 37031653 (-)
LOC118966688 NA coding upstream 1005 37682644 ~ 37687745 (-)
LOC118966689 NA coding upstream 7111 37688750 ~ 37693851 (-)
LOC118964577 NA coding upstream 379450 38061089 ~ 38061663 (-)
LOC118964575 NA coding upstream 384320 38065959 ~ 38066761 (-)
LOC110520456 NA coding upstream 1333436 39015075 ~ 39019091 (-)
G39904 NA non-coding downstream 104521 37571522 ~ 37571860 (-)
G39857 NA non-coding downstream 142323 37533836 ~ 37534058 (-)
G39856 NA non-coding downstream 143384 37532552 ~ 37532997 (-)
G39849 NA non-coding downstream 149978 37525861 ~ 37526403 (-)
G40049 NA non-coding upstream 3915 37685554 ~ 37691937 (-)
G40063 NA non-coding upstream 22140 37703779 ~ 37704012 (-)
G40086 NA non-coding upstream 40308 37721947 ~ 37722176 (-)
G40133 NA non-coding upstream 75557 37757196 ~ 37757454 (-)
G40151 NA non-coding upstream 89346 37770985 ~ 37771257 (-)
G38855 NA other downstream 1165552 36508538 ~ 36510829 (-)
LOC110522187 LOC106573361 other downstream 1267362 36370091 ~ 36409064 (-)
G38045 LOC106573386 other downstream 1954325 35721440 ~ 35722056 (-)
G37976 NA other downstream 2092773 35583292 ~ 35583608 (-)
G37907 NA other downstream 2235053 35440918 ~ 35441328 (-)
G40079 NA other upstream 34901 37716540 ~ 37717033 (-)
G40732 NA other upstream 443641 38125280 ~ 38125725 (-)
G40768 LOC106573348 other upstream 505849 38187488 ~ 38191736 (-)
G41868 NA other upstream 1340166 39021805 ~ 39022025 (-)
tspan9a LOC106573177 other upstream 5357089 42852829 ~ 43129052 (-)

Expression


Co-expression Network