Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964575 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 38065959 ~ 38066761 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051684.1 | False | 228 | mRNA | 0.37 | 2 | 38065959 | 38066605 |
| TU45842 | True | 272 | lncRNA | 0.42 | 1 | 38066490 | 38066761 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964577 | NA | coding | downstream | 4296 | 38061089 ~ 38061663 (-) |
| LOC118966689 | NA | coding | downstream | 372108 | 37688750 ~ 37693851 (-) |
| LOC118966688 | NA | coding | downstream | 378214 | 37682644 ~ 37687745 (-) |
| LOC118966685 | NA | coding | downstream | 384320 | 37676381 ~ 37681639 (-) |
| LOC118966683 | NA | coding | downstream | 390426 | 37670849 ~ 37675533 (-) |
| LOC110520456 | NA | coding | upstream | 948470 | 39015075 ~ 39019091 (-) |
| LOC110522389 | LOC106573347 | coding | upstream | 1014398 | 39081003 ~ 39084318 (-) |
| LOC118966691 | LOC106573346 | coding | upstream | 1034220 | 39100825 ~ 39115097 (-) |
| man2a2 | man2a2 | coding | upstream | 1248447 | 39315052 ~ 39336325 (-) |
| kip1 | kip1 | coding | upstream | 1290528 | 39357133 ~ 39359660 (-) |
| G40680 | NA | non-coding | downstream | 7605 | 38058130 ~ 38058354 (-) |
| G40679 | NA | non-coding | downstream | 8175 | 38057553 ~ 38057784 (-) |
| G40531 | NA | non-coding | downstream | 40959 | 38024756 ~ 38025000 (-) |
| G40530 | NA | non-coding | downstream | 41213 | 38024185 ~ 38024746 (-) |
| G40518 | NA | non-coding | downstream | 49121 | 38016579 ~ 38016838 (-) |
| G40769 | NA | non-coding | upstream | 125495 | 38192100 ~ 38192367 (-) |
| G40770 | NA | non-coding | upstream | 126057 | 38192662 ~ 38193071 (-) |
| G40767 | NA | non-coding | upstream | 127600 | 38194205 ~ 38195330 (-) |
| G40771 | NA | non-coding | upstream | 129835 | 38196440 ~ 38196678 (-) |
| G40776 | NA | non-coding | upstream | 136208 | 38202813 ~ 38203070 (-) |
| G40079 | NA | other | downstream | 348926 | 37716540 ~ 37717033 (-) |
| G38855 | NA | other | downstream | 1555130 | 36508538 ~ 36510829 (-) |
| LOC110522187 | LOC106573361 | other | downstream | 1656940 | 36370091 ~ 36409064 (-) |
| G38045 | LOC106573386 | other | downstream | 2343903 | 35721440 ~ 35722056 (-) |
| G37976 | NA | other | downstream | 2482351 | 35583292 ~ 35583608 (-) |
| G40732 | NA | other | upstream | 58675 | 38125280 ~ 38125725 (-) |
| G40768 | LOC106573348 | other | upstream | 120883 | 38187488 ~ 38191736 (-) |
| G41868 | NA | other | upstream | 955200 | 39021805 ~ 39022025 (-) |
| tspan9a | LOC106573177 | other | upstream | 4972123 | 42852829 ~ 43129052 (-) |
| G49774 | NA | other | upstream | 7654200 | 45720805 ~ 45721124 (-) |
| G40683 | NA | non-coding | downstream | 191 | 38061165 ~ 38066299 (-) |
