XLOC_019740



Basic Information


Item Value
gene id XLOC_019740
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 33145252 ~ 33146525 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00039676
ATGCCTTTGTTGCTGGCTGAGCTCATGTCTCCAGCTGTGAGAGTGGGATGGGGATTGGGCTTATGGCCTGCACGTACTGCTGCACTCATGAATGGAGAGGAACAGGTGTCCACCATCACCCAACAGAAGGAGCTTTGGTGACGCAAAACTGAACGGGTTCTGGATGGTTTTCCGGTCTGAACCTGCTTTGGGCAGTTTGATTGGACAAGTGTGTGCAGAAACACTTAAGGAATTGCTGGAAGACCCATTTCAAGATTACTTGACCAAAGCCCCCATGTGAAGCCCATGACTTGCACCTGCAGATGCTAGATAAAACCATAGTGTTCGCA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00039676 True 329 lncRNA 0.50 3 33145252 33146525

Neighbor


gene id symbol gene type direction distance location
XLOC_019739 CU019662.2 coding downstream 8169 33136948 ~ 33137083 (-)
XLOC_019738 CU019662.1 coding downstream 18555 33093331 ~ 33126697 (-)
XLOC_019737 zgc:194629 coding downstream 55048 33058625 ~ 33090204 (-)
XLOC_019736 slc34a1b coding downstream 112536 33006650 ~ 33032716 (-)
XLOC_019735 cnot6a coding downstream 363640 32757601 ~ 32781612 (-)
XLOC_019741 rbm22 coding upstream 64781 33211306 ~ 33229950 (-)
XLOC_019742 NA coding upstream 318750 33465275 ~ 33477963 (-)
XLOC_019743 NA coding upstream 490637 33637162 ~ 33646880 (-)
XLOC_019744 ebf1b coding upstream 578454 33724979 ~ 33995710 (-)
XLOC_019745 rnf145b coding upstream 855187 34001712 ~ 34032650 (-)
XLOC_019734 NA non-coding downstream 484812 32655957 ~ 32660440 (-)
XLOC_019727 NA non-coding downstream 866910 32126914 ~ 32278342 (-)
XLOC_019722 CR450753.1 non-coding downstream 1807467 31337670 ~ 31337785 (-)
XLOC_019755 NA non-coding upstream 2499013 35645538 ~ 35650096 (-)
XLOC_019757 NA non-coding upstream 2907959 36054484 ~ 36055407 (-)
XLOC_019765 BX649250.1 non-coding upstream 3926426 37072951 ~ 37073080 (-)

Expression



Co-expression Network