nudt4a (LOC106573306)


Basic Information

Item Value
gene id nudt4a
gene name LOC106573306
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 40849516 ~ 40879189 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601223.2
TTATGACAACCGAGGGCGTTTCATGTATGTTTCAGTTTGGGAAACTGCAAGTTATTGAACGTCTAATCGTGGCATGTAACGTCGCAGGGGCTGGCGCTGATATGTGGTCGCTGCGTTGTAGTGAGGTCAGCAAGATGCGGTGCTCACGGACCACAGATGGTGCTAGTTGGCGTAGGGAACATGCAGTTTGACAGCGGCAACTAGACAGGATGTTATGCAGAATCATCAACACACCGGGGATATGGGGTGCTTAATTGCTGTGAATGAATAGATGAACGACGTTGAAGTTTGATTGCCTGAAGGTTTATTTTGAGATTCAGTGCGTAGTTTCTTGCTCCTCTCTTGACCAAGTAGGCACTTGACTTGATCTGGTTGGATCCTTATGCACTCCACCTTTCGGATATCCTTGGAGCACGAAGGTTGTGAATATATGATGAAGTTTAAACCCAACCAGACGAGGATTTATGATGGCGAAGGTTTCAAGAGAAGAGCGGCATGTTTATGTTTCAAAAATGAAAAAGAGGACGAGGTGTTGCTGGTGAGCAGCAGTCGGCACCCAGACCAGTggattgtcccaggaggagggaTGGAGCCTGAGGAGGAGCCGTGTGGAGCAGCAGTCAGAGAGGTGTATGAAGAGGCTGGTGTAAAAGGAAAGCTTGGCAGGCTACTGGGGGTTTTCGAACACAAccaggacaggaaacacaggacGTACGTCTATGTCCTGACTGTGACAGAGACCTTGGAGGACTGGGAGGATTCTGTCAACATCGGTAGGAAACGGAAGTGGTTCAAGATCGACGAGGCTATCCAGGTGTTGCAGTGCCACAAGCCTGTCCATGCGGAGTACCTGCGCCGACTCACAGTCACCTGTAACCCCACCTGCAGCTCTACCTGTTGTGACCCCACCAATGGCAACACCTGGGTCTCCCCCCTGACGGACGACAAAGCCCCTCACTACGTCACCTCCACACAGGGGACAGATAGAGGACCACCCTTGGTCAACAGATAGGAAAGACATCGCAATCAAAGGAACCAGCATCATAAGAGGACCTAGCctaggtgccagtctgtttctgccaTCTTGCCAACTCCTTGTGGTCATGTTTGGCTTTCTATCATCAGAATGACATCAACCTCCGAGTCAGAGGTCTTTTGTTTCAAGTTATTCTTATTCTACATTTTGATTCCATAAAGTCAGTCTACTATGTTCTTTGGTCAATGCAGCCCTTTGGTGAACTGCTTTCTACGGGAAGTAGCTCTGGTAGGCCAATAGAAGGTAGTGTTCGCTCTAGAAAGGCTCATGTCCTTTATGTCAAAACCCCAATTGCTGCTTAGTGAGTCTCATAACTTTAAGTCTTCACTGCCAAAGTACATTTCATAGAGATCTCCGGTTGAACAAGTAAATAACTTATTTGGTAAAGTGATATCTAATTTTTAGTTACCCATTTCCTACTGCTTATAGTTGTATAAGTAGCACCATTTCCATGTCCTTACGAGCTGTTTTCTAGTTTACATAGTGAGTTTGAAAGAGCAGCTTTGGCCTAGAAACTGGATCATTTAAAAGACTGTTTGCTTATCTACAACCACACAGTATTGCGCAAGAACAAAAGATTTGTACATATTTATTTTTAGAATATATGGAATACAGCCCAATAATTGTTTTAACAAATATTTTTTGAGTGGGAAAATGTTTTAAGTGGGAACATATTCCAAGTTACATCGATATTTTTCTGTGAGGGCTATAATATAACTTACAGGGATATTTTTCTGTGTCGGCCTGCATGATTGACTAGTGAAAGCATAAAGGCCTGTGACTGACATGTCTTTCAAACGGAACACAGAACAGAGTCCTATCAAGTGTCTTAACAGCCATAGTAACCTGTGTAATGTGTGTCAAATTCATAAGATGTGAATGTGGGCACTGGAAGGGAAAACAGATCATTTTAGCACAGATACTTTTACTAGCCTGGTGAAACCTGCCTGATTGTGTGATAGCTCACATTTTGTTTCACTTgacaattgaaaaaaaaaactaaatgtgaGTACATCGGTCAGTCTGCTTGACCAGGCTATTTTTTTGCTGGAGGAGAAATAGATTGTCATAGAACGGTTTGAGAGGGCTTGTGCCCTGAGCTGATTGTCAAGGAGACTATGATGCTTTTGCATTGTATTTAGAATGTATGTGAGGATTTAGCAAGTGTTGCCAAAATGACTCCATTTTGTTAATGGTACATGTTTTGATATGTACATTATTATTGAGaaatatgatttgtttttcaaggggactccccccccccccccccccccctataatcATTAGAATTTGGAGGAATTAAACAGGACAGAGCATACACAAGAACATCtgctctggcagctctggctttGACATGTAACTGAAAGGATCAAAAACGGATGCTATTATATAAAGTCTAGTAAAGACATTAAAATAGCATGTGTTAGTTATTTTATCTTTCCAATCAAAGTGATTGAGGGTTACGCAACTGCATGTGTACACAAATGTGTACCCATAATGTGTTCTCTGCTCTTCACTCTCGTTCTTAAATAAAGATACTGTGTTTAAATATCTAAA
>TU49518
CCTCCTGAAGCGTCTTACCCAGTCGCGCACAGAAAAGCTAGCTATGCTGCAGcgcaagtggggacacttcaggctgtGGAGCTGGTGTAAAAGGAAAGCTTGGCAGGCTACTGGGGGTTTTCGAACACAAccaggacaggaaacacaggacGTACGTCTATGTCCTGACTGTGACAGAGACCTTGGAGGACTGGGAGGATTCTGTCAACATCGGTAGGAAACGGAAGTGGTTCAAGATCGACGAGGCTATCCAGGTGTTGCAGTGCCACAAGCCTGTCCATGCGGAGTACCTGCGCCGACTCACAGTCACCTGTAACCCCACCTGCAGCTCTACCTGTTGTGACCCCACCAATGGCAACACCTGGGTCTCCCCCCTGACGGACGACAAAGCCCCTCACTACGTCACCTCCACACAGGGGACAGATAGAGGACCACCCTTGGTCAACAGATAGGAAAGACATCGCAATCAAAGGAACCAGCATCATAAGAGGACCTAGCctaggtgccagtctgtttctgccaTCTTGCCAACTCCTTGTGGTCATGTTTGGCTTTCTATCATCAGAATGACATCAACCTCCGAGTCAGAGGTCTTTTGTTTCAAGTTATTCTTATTCTACATTTTGATTCCATAAAGTCAGTCTACTATGTTCTTTGGTCAATGCAGCCCTTTGGTGAACTGCTTTCTACGGGAAGTAGCTCTGGTAGGCCAATAGAAGGTAGTGTTCGCTCTAGAAAGGCTCATGTCCTTTATGTCAAAACCCCAATTGCTGCTTAGTGAGTCTCATAACTTTAAGTCTTCACTGCCAAAGTACATTTCATAGAGATCTCCGGTTGAACAAGTAAATAACTTATTTGGTAAAGTGATATCTAATTTTTAGTTACCCATTTCCTACTGCTTATAGTTGTATAAGTAGCACCATTTCCATGTCCTTACGAGCTGTTTTCTAGTTTACATAGTGAGTTTGAAAGAGCAGCTTTGGCCTAGAAACTGGATCATTTAAAAGACTGTTTGCTTATCTACAACCACACAGTATTGCGCAAGAACAAAAGATTTGTACATATTTATTTTTAGAATATATGGAATACAGCCCAATAATTGTTTTAACAAATATTTTTTGAGTGGGAAAATGTTTTAAGTGGGAACATATTCCAAGTTACATCGATATTTTTCTGTGAGGGCTATAATATAACTTACAGGGATATTTTTCTGTGTCGGCCTGCATGATTGACTAGTGAAAGCATAAAGGCCTGTGACTGACATGTCTTTCAAACGGAACACAGAACAGAGTCCTATCAAGTGTCTTAACAGCCATAGTAACCTGTGTAATGTGTGTCAAATTCATAAGATGTGAATGTGGGCACTGGAAGGGAAAACAGATCATTTTAGCACAGATACTTTTACTAGCCTGGTGAAACCTGCCTGATTGTGTGATAGCTCACATTTTGTTTCACTTgacaattgaaaaaaaaaactaaatgtgaGTACATCGGTCAGTCTGCTTGACCAGGCTATTTTTTTGCTGGAGGAGAAATAGATTGTCATAGAACGGTTTGAGAGGGCTTGTGCCCTGAGCTGATTGTCAAGGAGACTATGATGCTTTTGCATTGTATTTAGAATGTATGTGAGGATTTAGCAAGTGTTGCCAAAATGACTCCATTTTGTTAATGGTACATGTTTTGATATGTACATTATTATTGAGaaatatgatttgtttttcaaggggactccccccccccccccccccccctataatcATTAGAATTTGGAGGAATTAAACAGGACAGAGCATACACAAGAACATCtgctctggcagctctggctttGACATGTAACTGAAAGGATC

Function

NR:

description
PREDICTED: diphosphoinositol polyphosphate phosphohydrolase 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601223.2 False 2593 mRNA 0.43 5 40849516 40879189
TU49518 True 1847 lncRNA 0.43 4 40849702 40858845

Neighbor

gene id symbol gene type direction distance location
eea1 LOC106573307 coding downstream 16060 40790070 ~ 40833456 (-)
LOC110522681 LOC106573309 coding downstream 98726 40590092 ~ 40750790 (-)
bhlhe41 LOC106573310 coding downstream 280786 40565319 ~ 40568730 (-)
kras rask coding downstream 335631 40497381 ~ 40513885 (-)
trnar-ucg NA coding downstream 1108031 39741413 ~ 39741485 (-)
ube2na ube2n coding upstream 1292 40880481 ~ 40904825 (-)
LOC110522782 LOC106573302 coding upstream 41750 40920939 ~ 40943817 (-)
LOC110522804 LOC106561421 coding upstream 69150 40948339 ~ 40984857 (-)
LOC110522807 NA coding upstream 207402 41086591 ~ 41097332 (-)
LOC110522809 LOC106573298 coding upstream 253506 41132695 ~ 41160829 (-)
G44160 NA non-coding downstream 62139 40786721 ~ 40787377 (-)
G44076 NA non-coding downstream 203001 40605111 ~ 40646515 (-)
G44006 NA non-coding downstream 355001 40494284 ~ 40494515 (-)
G43685 NA non-coding downstream 365996 40483284 ~ 40483520 (-)
G43673 NA non-coding downstream 375819 40473481 ~ 40473697 (-)
G44269 NA non-coding upstream 117956 40997145 ~ 40997407 (-)
G44724 NA non-coding upstream 129349 41008538 ~ 41009071 (-)
G44729 NA non-coding upstream 135605 41014794 ~ 41015020 (-)
G44787 NA non-coding upstream 200865 41080054 ~ 41080383 (-)
G41868 NA other downstream 1827491 39021805 ~ 39022025 (-)
G40768 LOC106573348 other downstream 2657780 38187488 ~ 38191736 (-)
G40732 NA other downstream 2723791 38125280 ~ 38125725 (-)
G40079 NA other downstream 3132483 37716540 ~ 37717033 (-)
G38855 NA other downstream 4338687 36508538 ~ 36510829 (-)
tspan9a LOC106573177 other upstream 2159539 42852829 ~ 43129052 (-)
G49774 NA other upstream 4841616 45720805 ~ 45721124 (-)
G49962 NA other upstream 5069769 45948958 ~ 45949951 (-)
G51214 NA other upstream 6185585 47064774 ~ 47236625 (-)
G51285 LOC106561952 other upstream 6409750 47288939 ~ 47289681 (-)
G44204 NA non-coding upstream 408 40859253 ~ 40859577 (-)
G44212 NA non-coding upstream 10710 40869555 ~ 40869767 (-)
G44220 NA non-coding upstream 17330 40876175 ~ 40876529 (-)

Expression


Co-expression Network