LOC110523666 (LOC106573213)


Basic Information

Item Value
gene id LOC110523666
gene name LOC106573213
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 45115903 ~ 45142315 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021602577.2
GAAAAAGGACATGGTGTAGTCCTCCTATACAATTGGTTTAGAAAAACTAGGTTAGTAGTGCGGCAGTCATGACAGAGGGGAGAAAGTAGGTCACAGACTGAGTACCGAATATCCCAGTTTTTGAAACAGAGGATTCTATCATTGAATGGAGATGGCCTAGCTGATTTATCTCATGTAGAGCACCTAGCTCAGTGTCTCAGAGAAGGAGTACCAGACCAACCAACCAGGAGGTGCACATAGATACTGTGACATGATCCTggggcccattgttgtgccattcatccgccgccatcacctcatgttttcagcatgataatgcacggccccatgtcgcaaggatctgtacacaattcctggaagctaaaaatcCCAGTTGGTGCATTGTCCAAATACTcacgtcacccattgagcatgtttgggatgcttgacgtgtacgacagcgttttCCATTTCCCGCCAATaaccagcaacttcgcacagccattgaagagggatgggacaacattccacaggccacaatcaacagcctgatcaactctgaaGCATTgctctcaacctttgcctctcccgagtcccatcgctgcaactcccctacggacaaGACAAAGTTCAAATTGGATATCCCGAGAttggggaggaaaaagggAGCAATTGCAAATGGATGGAAGGAAATTCCAGAAGCTGGAATGAACATTTGTGATTGTCTAATGGCAGACCAAAGAATGGACATTACCTCTACAATGAATGAGTTCATGTCCCCCAGCTCCAGCGACCTGATCAGCAGCTCCGTCAACACCCCAGGCATGGACTACACCCGCAAGAGAAAGAGCAGCACCTCCGACTACCAAATTGATGGATTTTCTTTCGAGGAGTGTGGTGATCACCAGGGACGGATAAAAAATGCCAGGGAGGCACACAGTCAGATTGAGAAGCGGCGCAGGGACAAGATGAACAGCTTCATAGACGAGCTGGCTGCACTAGTCCCTACCTGCAACGCTATGTCCCGCAAGCTGGACAAACTCACGGTCCTACGCATGGCTGTCCAGCATATGAAGACATTAAGAGGAGCAGCAAACCCTTACACAGAGGCGAACTACAAGCCGTCTTTCCTGACCGATGATGAACTGAAGCACTTAATATTGAGGGCTGCTGACGGCTTTCTGTTTGTTGTTGGATGTGATCGTGGGAAGATCCTTTTTGTCTCGGAGTCAGTTTACAAGATCCTCAACTATTGCCAGAATGACCTAATTGGACAGAGTCTGTTTGATTACCTGCATCCTAAAgacattgccaaagtcaaggAGCAACTGTCGTCATCGGATACAGCACCTCGGGAGCGGCTAATTGATGCCAAAACCGGTCTACCAGTTAAGACAGACATCACCCCTGGGCCATCTCGACTGTGCTCCGGGGCCAGACGCTCGTTCTTCTGCCGAATGAAGTGTAACCGGCCCTACGTCAAAACAGAGGATAAGGACTTCCCCTCCACCTGCTCCAAAAAGAAAGCCGACCGCAAGAGCTTCTGCACGATCCACAGTACTGGCTACCTGAAGAGCTGGCCGCCCACCCAGATGGGCCTGGACGATGACAACGAGCCCGACAATGAGGGCTGTAACCTCAGCTGCCTAGTGGCCATCGGCCGGCTGCATCCCCACATCGTCCCCCAGCCCTCCTACGAGGACATCCGCGTCAAACCCACCGACTACGTCTCCCGCCACGCCATCGATGGGAAGTTTGTCTTTGTTGACCAGAGGGCCACAGCCATTCTTGCATACTTACCCCAGGAGCTTCTTGGCACCTCTTTCTACGAGTATTTCCATCAGGATGATATCGGCCACCTGGCAAAATGTCACAGACAAGTGCTTCAGATGAGAGAAAAGATCAACACAAACTGTTATAAGTTCAAGATTAAAGATGGCTCCTTCATCACTCTGCGAAGTCGCTGGTTCAGTTTCATGAATCCTTGGACCAAAGAGGTGGAGTACATCGTCTCCACAAACACAGTGGTCTCGTGCAGTATGCTGGATGGTGCAGACTCCAGCTATCCTCAGTCTGCTGTGTCTCCCACTGCCTCTATGGACGGTGTGCTGACATCAGAAGGTGGAGGGAGACGGGCCCTTCAGACGGTGCCAGGCATCCCCGGGGGAACACGTGCAGGTGCCGGTAAGATCGGTCGCATGATCGCAGAGGAGGTGATGGAGActcagagGACCCGAGGCTCGACCCCCTCCAGCTGTGGCTCCAGCCCCCTGAACATCAGCACCCCTCCTCCAGACTGCTCTCCAGGGGGCAAGAGAATTCAAAATGGAACGCCAGACCTTCCGTCGGCAGGGACGCTACCAGGAGGACCCGACACCATTGGATACCCATACTCCAACCAGTCTATTATGAGTGACAACTCGCACCTCAGCATTGACGAACCAGGCTCCAGCAGCCCCAGTAATGACGAGGCAGCCATGGCTGTGATCATGAGTCTCCTGGAGGCTGATGCAGGCCTCGGTGGCCCTGTAGACTTCAGTGACTTACCCTGGCCCTTGTGAGGACAGCCCCAGCAGGGCTGTTGGAATCCTTGGCCCAGAGAACCCTGAATTGACCATGCAGTCATATCAATAGGAACCATGCTAGCGAACTACAGCTACTGTAGACTCATTGGAGCCAAGAGCAGGACAAGACCCCTGTGTCTGCATACAGGCCCTCCCTTGCCTGCTGATTGGCACTCTTCCATTGACATTCCCCACAGGATGATTCAGTTAGCATTTTTATTGTATATTTTCCTGCATTATCCTACCAGGGATTTCTATATTGAAAACATGTCTTTAGTGTTTTGATGCTTTTACACTACAATGGTTGGATATCCCCATTGACAAATGTAATGAATACATGGTATCAGCAGTAAAATATTTTTGAAATTGAA
>XM_021602586.2
GAAAAAGGACATGGTGTAGTCCTCCTATACAATTGGTTTAGAAAAACTAGGTTAGTAGTGCGGCAGTCATGACAGAGGGGAGAAAGTAGGTCACAGACTGAGTACCGAATATCCCAGTTTTTGAAACAGAGGATTCTATCATTGAATGGAGATGGCCTAGCTGATTTATCTCATGTAGAGCACCTAGCTCAGTGTCTCAGAGAAGGAGTACCAGACCAACCAACCAGGAGGTGCACATAGATACTGTGACATGATCCTggggcccattgttgtgccattcatccgccgccatcacctcatgttttcagcatgataatgcacggccccatgtcgcaaggatctgtacacaattcctggaagctaaaaatcCCAGTTGGTGCATTGTCCAAATACTcacgtcacccattgagcatgtttgggatgcttgacgtgtacgacagcgttttCCATTTCCCGCCAATaaccagcaacttcgcacagccattgaagagggatgggacaacattccacaggccacaatcaacagcctgatcaactctgaaGCATTgctctcaacctttgcctctcccgagtcccatcgctgcaactcccctacggacaaGACAAAGTTCAAATTGGATATCCCGAGAttggggaggaaaaaggggtaaaaaAGCAATTGCAAATGGATGGAAGGAAATTCCAGAAGCTGGAATGAACATTTGTGATTGTCTAATGGCAGACCAAAGAATGGACATTACCTCTACAATGAATGAGTTCATGTCCCCCAGCTCCAGCGACCTGATCAGCAGCTCCGTCAACACCCCAGGCATGGACTACACCCGCAAGAGAAAGAGCAGCACCTCCGACTACCAAATTGATGGATTTTCTTTCGAGGAGTGTGGTGATCACCAGGGACGGATAAAAAATGCCAGGGAGGCACACAGTCAGATTGAGAAGCGGCGCAGGGACAAGATGAACAGCTTCATAGACGAGCTGGCTGCACTAGTCCCTACCTGCAACGCTATGTCCCGCAAGCTGGACAAACTCACGGTCCTACGCATGGCTGTCCAGCATATGAAGACATTAAGAGGAGCAGCAAACCCTTACACAGAGGCGAACTACAAGCCGTCTTTCCTGACCGATGATGAACTGAAGCACTTAATATTGAGGGCTGCTGACGGCTTTCTGTTTGTTGTTGGATGTGATCGTGGGAAGATCCTTTTTGTCTCGGAGTCAGTTTACAAGATCCTCAACTATTGCCAGAATGACCTAATTGGACAGAGTCTGTTTGATTACCTGCATCCTAAAgacattgccaaagtcaaggAGCAACTGTCGTCATCGGATACAGCACCTCGGGAGCGGCTAATTGATGCCAAAACCGGTCTACCAGTTAAGACAGACATCACCCCTGGGCCATCTCGACTGTGCTCCGGGGCCAGACGCTCGTTCTTCTGCCGAATGAAGTGTAACCGGCCCTACGTCAAAACAGAGGATAAGGACTTCCCCTCCACCTGCTCCAAAAAGAAAGCCGACCGCAAGAGCTTCTGCACGATCCACAGTACTGGCTACCTGAAGAGCTGGCCGCCCACCCAGATGGGCCTGGACGATGACAACGAGCCCGACAATGAGGGCTGTAACCTCAGCTGCCTAGTGGCCATCGGCCGGCTGCATCCCCACATCGTCCCCCAGCCCTCCTACGAGGACATCCGCGTCAAACCCACCGACTACGTCTCCCGCCACGCCATCGATGGGAAGTTTGTCTTTGTTGACCAGAGGGCCACAGCCATTCTTGCATACTTACCCCAGGAGCTTCTTGGCACCTCTTTCTACGAGTATTTCCATCAGGATGATATCGGCCACCTGGCAAAATGTCACAGACAAGTGCTTCAGATGAGAGAAAAGATCAACACAAACTGTTATAAGTTCAAGATTAAAGATGGCTCCTTCATCACTCTGCGAAGTCGCTGGTTCAGTTTCATGAATCCTTGGACCAAAGAGGTGGAGTACATCGTCTCCACAAACACAGTGGTCTCGTGCAGTATGCTGGATGGTGCAGACTCCAGCTATCCTCAGTCTGCTGTGTCTCCCACTGCCTCTATGGACGGTGTGCTGACATCAGAAGGTGGAGGGAGACGGGCCCTTCAGACGGTGCCAGGCATCCCCGGGGGAACACGTGCAGGTGCCGGTAAGATCGGTCGCATGATCGCAGAGGAGGTGATGGAGActcagagGACCCGAGGCTCGACCCCCTCCAGCTGTGGCTCCAGCCCCCTGAACATCAGCACCCCTCCTCCAGACTGCTCTCCAGGGGGCAAGAGAATTCAAAATGGAACGCCAGACCTTCCGTCGGCAGGGACGCTACCAGGAGGACCCGACACCATTGGATACCCATACTCCAACCAGTCTATTATGAGTGACAACTCGCACCTCAGCATTGACGAACCAGGCTCCAGCAGCCCCAGTAATGACGAGGCAGCCATGGCTGTGATCATGAGTCTCCTGGAGGCTGATGCAGGCCTCGGTGGCCCTGTAGACTTCAGTGACTTACCCTGGCCCTTGTGAGGACAGCCCCAGCAGGGCTGTTGGAATCCTTGGCCCAGAGAACCCTGAATTGACCATGCAGTCATATCAATAGGAACCATGCTAGCGAACTACAGCTACTGTAGACTCATTGGAGCCAAGAGCAGGACAAGACCCCTGTGTCTGCATACAGGCCCTCCCTTGCCTGCTGATTGGCACTCTTCCATTGACATTCCCCACAGGATGATTCAGTTAGCATTTTTATTGTATATTTTCCTGCATTATCCTACCAGGGATTTCTATATTGAAAACATGTCTTTAGTGTTTTGATGCTTTTACACTACAATGGTTGGATATCCCCATTGACAAATGTAATGAATACATGGTATCAGCAGTAAAATATTTTTGAAATTGAA
>XM_021602595.2
GAAAAAGGACATGGTGTAGTCCTCCTATACAATTGGTTTAGAAAAACTAGGTTAGTAGTGCGGCAGTCATGACAGAGGGGAGAAAGTAGGTCACAGACTGAGTACCGAATATCCCAGTTTTTGAAACAGAGGATTCTATCATTGAATGGAGATGGCCTAGCTGATTTATCTCATGTAAAGCAATTGCAAATGGATGGAAGGAAATTCCAGAAGCTGGAATGAACATTTGTGATTGTCTAATGGCAGACCAAAGAATGGACATTACCTCTACAATGAATGAGTTCATGTCCCCCAGCTCCAGCGACCTGATCAGCAGCTCCGTCAACACCCCAGGCATGGACTACACCCGCAAGAGAAAGAGCAGCACCTCCGACTACCAAATTGATGGATTTTCTTTCGAGGAGTGTGGTGATCACCAGGGACGGATAAAAAATGCCAGGGAGGCACACAGTCAGATTGAGAAGCGGCGCAGGGACAAGATGAACAGCTTCATAGACGAGCTGGCTGCACTAGTCCCTACCTGCAACGCTATGTCCCGCAAGCTGGACAAACTCACGGTCCTACGCATGGCTGTCCAGCATATGAAGACATTAAGAGGAGCAGCAAACCCTTACACAGAGGCGAACTACAAGCCGTCTTTCCTGACCGATGATGAACTGAAGCACTTAATATTGAGGGCTGCTGACGGCTTTCTGTTTGTTGTTGGATGTGATCGTGGGAAGATCCTTTTTGTCTCGGAGTCAGTTTACAAGATCCTCAACTATTGCCAGAATGACCTAATTGGACAGAGTCTGTTTGATTACCTGCATCCTAAAgacattgccaaagtcaaggAGCAACTGTCGTCATCGGATACAGCACCTCGGGAGCGGCTAATTGATGCCAAAACCGGTCTACCAGTTAAGACAGACATCACCCCTGGGCCATCTCGACTGTGCTCCGGGGCCAGACGCTCGTTCTTCTGCCGAATGAAGTGTAACCGGCCCTACGTCAAAACAGAGGATAAGGACTTCCCCTCCACCTGCTCCAAAAAGAAAGCCGACCGCAAGAGCTTCTGCACGATCCACAGTACTGGCTACCTGAAGAGCTGGCCGCCCACCCAGATGGGCCTGGACGATGACAACGAGCCCGACAATGAGGGCTGTAACCTCAGCTGCCTAGTGGCCATCGGCCGGCTGCATCCCCACATCGTCCCCCAGCCCTCCTACGAGGACATCCGCGTCAAACCCACCGACTACGTCTCCCGCCACGCCATCGATGGGAAGTTTGTCTTTGTTGACCAGAGGGCCACAGCCATTCTTGCATACTTACCCCAGGAGCTTCTTGGCACCTCTTTCTACGAGTATTTCCATCAGGATGATATCGGCCACCTGGCAAAATGTCACAGACAAGTGCTTCAGATGAGAGAAAAGATCAACACAAACTGTTATAAGTTCAAGATTAAAGATGGCTCCTTCATCACTCTGCGAAGTCGCTGGTTCAGTTTCATGAATCCTTGGACCAAAGAGGTGGAGTACATCGTCTCCACAAACACAGTGGTCTCGTGCAGTATGCTGGATGGTGCAGACTCCAGCTATCCTCAGTCTGCTGTGTCTCCCACTGCCTCTATGGACGGTGTGCTGACATCAGAAGGTGGAGGGAGACGGGCCCTTCAGACGGTGCCAGGCATCCCCGGGGGAACACGTGCAGGTGCCGGTAAGATCGGTCGCATGATCGCAGAGGAGGTGATGGAGActcagagGACCCGAGGCTCGACCCCCTCCAGCTGTGGCTCCAGCCCCCTGAACATCAGCACCCCTCCTCCAGACTGCTCTCCAGGGGGCAAGAGAATTCAAAATGGAACGCCAGACCTTCCGTCGGCAGGGACGCTACCAGGAGGACCCGACACCATTGGATACCCATACTCCAACCAGTCTATTATGAGTGACAACTCGCACCTCAGCATTGACGAACCAGGCTCCAGCAGCCCCAGTAATGACGAGGCAGCCATGGCTGTGATCATGAGTCTCCTGGAGGCTGATGCAGGCCTCGGTGGCCCTGTAGACTTCAGTGACTTACCCTGGCCCTTGTGAGGACAGCCCCAGCAGGGCTGTTGGAATCCTTGGCCCAGAGAACCCTGAATTGACCATGCAGTCATATCAATAGGAACCATGCTAGCGAACTACAGCTACTGTAGACTCATTGGAGCCAAGAGCAGGACAAGACCCCTGTGTCTGCATACAGGCCCTCCCTTGCCTGCTGATTGGCACTCTTCCATTGACATTCCCCACAGGATGATTCAGTTAGCATTTTTATTGTATATTTTCCTGCATTATCCTACCAGGGATTTCTATATTGAAAACATGTCTTTAGTGTTTTGATGCTTTTACACTACAATGGTTGGATATCCCCATTGACAAATGTAATGAATACATGGTATCAGCAGTAAAATATTTTTGAAATTGAA
>XM_036978291.1
GAAAAAGGACATGGTGTAGTCCTCCTATACAATTGGTTTAGAAAAACTAGGTTAGTAGTGCGGCAGTCATGACAGAGGGGAGAAAGTAGGTCACAGACTGAGTACCGAATATCCCAGTTTTTGAAACAGAGGATTCTATCATTGAATGGAGATGGCCTAGCTGATTTATCTCATAGCACCTAGCTCAGTGTCTCAGAGAAGGAGTACCAGACCAACCAACCAGGAGGTGCACATAGATACTGTGACATGATCCTggggcccattgttgtgccattcatccgccgccatcacctcatgttttcagcatgataatgcacggccccatgtcgcaaggatctgtacacaattcctggaagctaaaaatcCCAGTTGGTGCATTGTCCAAATACTcacgtcacccattgagcatgtttgggatgcttgacgtgtacgacagcgttttCCATTTCCCGCCAATaaccagcaacttcgcacagccattgaagagggatgggacaacattccacaggccacaatcaacagcctgatcaactctgaaGCATTgctctcaacctttgcctctcccgagtcccatcgctgcaactcccctacggacaaGACAAAGTTCAAATTGGATATCCCGAGAttggggaggaaaaagggAGCAATTGCAAATGGATGGAAGGAAATTCCAGAAGCTGGAATGAACATTTGTGATTGTCTAATGGCAGACCAAAGAATGGACATTACCTCTACAATGAATGAGTTCATGTCCCCCAGCTCCAGCGACCTGATCAGCAGCTCCGTCAACACCCCAGGCATGGACTACACCCGCAAGAGAAAGAGCAGCACCTCCGACTACCAAATTGATGGATTTTCTTTCGAGGAGTGTGGTGATCACCAGGGACGGATAAAAAATGCCAGGGAGGCACACAGTCAGATTGAGAAGCGGCGCAGGGACAAGATGAACAGCTTCATAGACGAGCTGGCTGCACTAGTCCCTACCTGCAACGCTATGTCCCGCAAGCTGGACAAACTCACGGTCCTACGCATGGCTGTCCAGCATATGAAGACATTAAGAGGAGCAGCAAACCCTTACACAGAGGCGAACTACAAGCCGTCTTTCCTGACCGATGATGAACTGAAGCACTTAATATTGAGGGCTGCTGACGGCTTTCTGTTTGTTGTTGGATGTGATCGTGGGAAGATCCTTTTTGTCTCGGAGTCAGTTTACAAGATCCTCAACTATTGCCAGAATGACCTAATTGGACAGAGTCTGTTTGATTACCTGCATCCTAAAgacattgccaaagtcaaggAGCAACTGTCGTCATCGGATACAGCACCTCGGGAGCGGCTAATTGATGCCAAAACCGGTCTACCAGTTAAGACAGACATCACCCCTGGGCCATCTCGACTGTGCTCCGGGGCCAGACGCTCGTTCTTCTGCCGAATGAAGTGTAACCGGCCCTACGTCAAAACAGAGGATAAGGACTTCCCCTCCACCTGCTCCAAAAAGAAAGCCGACCGCAAGAGCTTCTGCACGATCCACAGTACTGGCTACCTGAAGAGCTGGCCGCCCACCCAGATGGGCCTGGACGATGACAACGAGCCCGACAATGAGGGCTGTAACCTCAGCTGCCTAGTGGCCATCGGCCGGCTGCATCCCCACATCGTCCCCCAGCCCTCCTACGAGGACATCCGCGTCAAACCCACCGACTACGTCTCCCGCCACGCCATCGATGGGAAGTTTGTCTTTGTTGACCAGAGGGCCACAGCCATTCTTGCATACTTACCCCAGGAGCTTCTTGGCACCTCTTTCTACGAGTATTTCCATCAGGATGATATCGGCCACCTGGCAAAATGTCACAGACAAGTGCTTCAGATGAGAGAAAAGATCAACACAAACTGTTATAAGTTCAAGATTAAAGATGGCTCCTTCATCACTCTGCGAAGTCGCTGGTTCAGTTTCATGAATCCTTGGACCAAAGAGGTGGAGTACATCGTCTCCACAAACACAGTGGTCTCGTGCAGTATGCTGGATGGTGCAGACTCCAGCTATCCTCAGTCTGCTGTGTCTCCCACTGCCTCTATGGACGGTGTGCTGACATCAGAAGGTGGAGGGAGACGGGCCCTTCAGACGGTGCCAGGCATCCCCGGGGGAACACGTGCAGGTGCCGGTAAGATCGGTCGCATGATCGCAGAGGAGGTGATGGAGActcagagGACCCGAGGCTCGACCCCCTCCAGCTGTGGCTCCAGCCCCCTGAACATCAGCACCCCTCCTCCAGACTGCTCTCCAGGGGGCAAGAGAATTCAAAATGGAACGCCAGACCTTCCGTCGGCAGGGACGCTACCAGGAGGACCCGACACCATTGGATACCCATACTCCAACCAGTCTATTATGAGTGACAACTCGCACCTCAGCATTGACGAACCAGGCTCCAGCAGCCCCAGTAATGACGAGGCAGCCATGGCTGTGATCATGAGTCTCCTGGAGGCTGATGCAGGCCTCGGTGGCCCTGTAGACTTCAGTGACTTACCCTGGCCCTTGTGAGGACAGCCCCAGCAGGGCTGTTGGAATCCTTGGCCCAGAGAACCCTGAATTGACCATGCAGTCATATCAATAGGAACCATGCTAGCGAACTACAGCTACTGTAGACTCATTGGAGCCAAGAGCAGGACAAGACCCCTGTGTCTGCATACAGGCCCTCCCTTGCCTGCTGATTGGCACTCTTCCATTGACATTCCCCACAGGATGATTCAGTTAGCATTTTTATTGTATATTTTCCTGCATTATCCTACCAGGGATTTCTATATTGAAAACATGTCTTTAGTGTTTTGATGCTTTTACACTACAATGGTTGGATATCCCCATTGACAAATGTAATGAATACATGGTATCAGCAGTAAAATATTTTTGAAATTGAA
>XM_021602567.2
GATTGATGAGAAAAAGGACATGGTGTAGTCCTCCTATACAATTGGTTTAGAAAAACTAGGTTAGTAGTGCGGCAGTCATGACAGAGGGGAGAAAGTAGGTCACAGACTGAGTACCGAATATCCCAGTTTTTGAAACAGAGGATTCTATCATTGAATGGAGATGGCCTAGCTGATTTATCTCATAGCAATTGCAAATGGATGGAAGGAAATTCCAGAAGCTGGAATGAACATTTGTGATTGTCTAATGGCAGACCAAAGAATGGACATTACCTCTACAATGAATGAGTTCATGTCCCCCAGCTCCAGCGACCTGATCAGCAGCTCCGTCAACACCCCAGGCATGGACTACACCCGCAAGAGAAAGAGCAGCACCTCCGACTACCAAATTGATGGATTTTCTTTCGAGGAGTGTGGTGATCACCAGGGACGGATAAAAAATGCCAGGGAGGCACACAGTCAGATTGAGAAGCGGCGCAGGGACAAGATGAACAGCTTCATAGACGAGCTGGCTGCACTAGTCCCTACCTGCAACGCTATGTCCCGCAAGCTGGACAAACTCACGGTCCTACGCATGGCTGTCCAGCATATGAAGACATTAAGAGGAGCAGCAAACCCTTACACAGAGGCGAACTACAAGCCGTCTTTCCTGACCGATGATGAACTGAAGCACTTAATATTGAGGGCTGCTGACGGCTTTCTGTTTGTTGTTGGATGTGATCGTGGGAAGATCCTTTTTGTCTCGGAGTCAGTTTACAAGATCCTCAACTATTGCCAGAATGACCTAATTGGACAGAGTCTGTTTGATTACCTGCATCCTAAAgacattgccaaagtcaaggAGCAACTGTCGTCATCGGATACAGCACCTCGGGAGCGGCTAATTGATGCCAAAACCGGTCTACCAGTTAAGACAGACATCACCCCTGGGCCATCTCGACTGTGCTCCGGGGCCAGACGCTCGTTCTTCTGCCGAATGAAGTGTAACCGGCCCTACGTCAAAACAGAGGATAAGGACTTCCCCTCCACCTGCTCCAAAAAGAAAGCCGACCGCAAGAGCTTCTGCACGATCCACAGTACTGGCTACCTGAAGAGCTGGCCGCCCACCCAGATGGGCCTGGACGATGACAACGAGCCCGACAATGAGGGCTGTAACCTCAGCTGCCTAGTGGCCATCGGCCGGCTGCATCCCCACATCGTCCCCCAGCCCTCCTACGAGGACATCCGCGTCAAACCCACCGACTACGTCTCCCGCCACGCCATCGATGGGAAGTTTGTCTTTGTTGACCAGAGGGCCACAGCCATTCTTGCATACTTACCCCAGGAGCTTCTTGGCACCTCTTTCTACGAGTATTTCCATCAGGATGATATCGGCCACCTGGCAAAATGTCACAGACAAGTGCTTCAGATGAGAGAAAAGATCAACACAAACTGTTATAAGTTCAAGATTAAAGATGGCTCCTTCATCACTCTGCGAAGTCGCTGGTTCAGTTTCATGAATCCTTGGACCAAAGAGGTGGAGTACATCGTCTCCACAAACACAGTGGTCTCGTGCAGTATGCTGGATGGTGCAGACTCCAGCTATCCTCAGTCTGCTGTGTCTCCCACTGCCTCTATGGACGGTGTGCTGACATCAGAAGGTGGAGGGAGACGGGCCCTTCAGACGGTGCCAGGCATCCCCGGGGGAACACGTGCAGGTGCCGGTAAGATCGGTCGCATGATCGCAGAGGAGGTGATGGAGActcagagGACCCGAGGCTCGACCCCCTCCAGCTGTGGCTCCAGCCCCCTGAACATCAGCACCCCTCCTCCAGACTGCTCTCCAGGGGGCAAGAGAATTCAAAATGGAACGCCAGACCTTCCGTCGGCAGGGACGCTACCAGGAGGACCCGACACCATTGGATACCCATACTCCAACCAGTCTATTATGAGTGACAACTCGCACCTCAGCATTGACGAACCAGGCTCCAGCAGCCCCAGTAATGACGAGGCAGCCATGGCTGTGATCATGAGTCTCCTGGAGGCTGATGCAGGCCTCGGTGGCCCTGTAGACTTCAGTGACTTACCCTGGCCCTTGTGAGGACAGCCCCAGCAGGGCTGTTGGAATCCTTGGCCCAGAGAACCCTGAATTGACCATGCAGTCATATCAATAGGAACCATGCTAGCGAACTACAGCTACTGTAGACTCATTGGAGCCAAGAGCAGGACAAGACCCCTGTGTCTGCATACAGGCCCTCCCTTGCCTGCTGATTGGCACTCTTCCATTGACATTCCCCACAGGATGATTCAGTTAGCATTTTTATTGTATATTTTCCTGCATTATCCTACCAGGGATTTCTATATTGAAAACATGTCTTTAGTGTTTTGATGCTTTTACACTACAATGGTTGGATATCCCCATTGACAAATGTAATGAATACATGGTATCAGCAGTAAAATATTTTTGAAATTGAA
>TU55212
GTCATGACAGAGGGGAGAAAGTAGGTCACAGACTGAGTACCGAATATCCCAGTTTTTGAAACAGAGGATTCTATCATTGAATGGAGATGGCCTAGCTGATTTATCTCATGTAGAGCACCTAGCTCAGTGTCTCAGAGAAGGAGTACCAGACCAACCAACCAGGAGGTGCACATAGATACTGTGACATGATCCTggggcccattgttgtgccattcatccgccgccatcacctcatgttttcagcatgataatgcacggccccatgtcgcaaggatctgtacacaattcctggaagctaaaaatcCCAGTTGGTGCATTGTCCAAATACTcacgtcacccattgagcatgtttgggatgcttgacgtgtacgacagcgttttCCATTTCCCGCCAATaaccagcaacttcgcacagccattgaagagggatgggacaacattccacaggccacaatcaacagcctgatcaactctgaaGCATTgctctcaacctttgcctctcccgagtcccatcgctgcaactcccctacggacaaGACAAAGTTCAAATTGGATATCCCGAGAttggggaggaaaaaggggtaaaaagtacaaaaaaataaaatatgtcaaagagatgttgcgctgcatgagactggttttctgatccacgccc

Function

NR:

description
Transposable element Tcb1 transposase, partial

GO:

id name namespace
GO:0009648 photoperiodism biological_process
GO:0007623 circadian rhythm biological_process
GO:0045892 negative regulation of transcription, DNA-templated biological_process
GO:0045893 positive regulation of transcription, DNA-templated biological_process
GO:0007165 signal transduction biological_process
GO:0005634 nucleus cellular_component
GO:0005667 transcription regulator complex cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003677 DNA binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021602577.2 False 2914 mRNA 0.51 19 45115903 45142306
XM_021602586.2 False 2921 mRNA 0.51 19 45115903 45142306
XM_021602595.2 False 2446 mRNA 0.51 18 45115903 45142306
XM_036978291.1 False 2910 mRNA 0.51 19 45115903 45142306
XM_021602567.2 False 2451 mRNA 0.51 18 45115903 45142315
TU55212 True 655 lncRNA 0.50 2 45127089 45142241

Neighbor

gene id symbol gene type direction distance location
LOC110520774 NA coding downstream 214292 44900676 ~ 44901611 (-)
mmp15a LOC106573210 coding downstream 280417 44821497 ~ 44835486 (-)
LOC118960022 LOC106573206 coding downstream 298362 44816985 ~ 44817541 (-)
LOC110523630 LOC106561447 coding downstream 305523 44793384 ~ 44810380 (-)
lrrc29 LOC106573211 coding downstream 323071 44787137 ~ 44792832 (-)
LOC110523718 LOC106573216 coding upstream 107699 45250014 ~ 45256049 (-)
LOC110523724 LOC106573217 coding upstream 114921 45257236 ~ 45299871 (-)
parvaa LOC106573218 coding upstream 162323 45304638 ~ 45321671 (-)
LOC110523755 NA coding upstream 183594 45325909 ~ 45414664 (-)
LOC118964648 NA coding upstream 334338 45476653 ~ 45477841 (-)
G48907 NA non-coding downstream 46224 45069424 ~ 45069679 (-)
G48894 NA non-coding downstream 53027 45062655 ~ 45062876 (-)
G48779 NA non-coding downstream 212798 44902783 ~ 44903105 (-)
G48746 NA non-coding downstream 255913 44859721 ~ 44859990 (-)
G48738 NA non-coding downstream 275349 44840228 ~ 44840554 (-)
G49489 NA non-coding upstream 56291 45198606 ~ 45198941 (-)
G49510 NA non-coding upstream 78352 45220667 ~ 45220919 (-)
G49524 NA non-coding upstream 101458 45243773 ~ 45243993 (-)
G49456 NA non-coding upstream 180890 45323205 ~ 45324572 (-)
tspan9a LOC106573177 other downstream 1986874 42852829 ~ 43129052 (-)
G41868 NA other downstream 6093878 39021805 ~ 39022025 (-)
G40768 LOC106573348 other downstream 6924167 38187488 ~ 38191736 (-)
G40732 NA other downstream 6990178 38125280 ~ 38125725 (-)
G40079 NA other downstream 7398870 37716540 ~ 37717033 (-)
G49774 NA other upstream 578490 45720805 ~ 45721124 (-)
G49962 NA other upstream 806643 45948958 ~ 45949951 (-)
G51214 NA other upstream 1922459 47064774 ~ 47236625 (-)
G51285 LOC106561952 other upstream 2146624 47288939 ~ 47289681 (-)
G51649 LOC106573246 other upstream 2235326 47377641 ~ 47378543 (-)

Expression


Co-expression Network