Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110523755 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 45325909 ~ 45414664 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| F-actin-methionine sulfoxide oxidase MICAL2-like isoform X11 |
| id | description |
|---|---|
| K19947 | MICAL; F-actin monooxygenase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021602806.2 | False | 4989 | mRNA | 0.54 | 30 | 45325909 | 45414654 |
| XM_021602799.2 | False | 5483 | mRNA | 0.53 | 35 | 45325909 | 45414659 |
| XM_021602733.2 | False | 5983 | mRNA | 0.53 | 38 | 45325909 | 45414661 |
| XM_021602744.2 | False | 5968 | mRNA | 0.53 | 38 | 45325909 | 45414661 |
| XM_021602753.2 | False | 5965 | mRNA | 0.53 | 38 | 45325909 | 45414661 |
| XM_021602763.2 | False | 5896 | mRNA | 0.53 | 37 | 45325909 | 45414661 |
| XM_021602772.2 | False | 5890 | mRNA | 0.53 | 37 | 45325909 | 45414661 |
| XM_021602780.2 | False | 5854 | mRNA | 0.53 | 37 | 45325909 | 45414661 |
| XM_021602790.2 | False | 5803 | mRNA | 0.53 | 36 | 45325909 | 45414661 |
| XM_036978376.1 | False | 5980 | mRNA | 0.53 | 38 | 45325909 | 45414661 |
| XM_036978367.1 | False | 6137 | mRNA | 0.53 | 39 | 45325909 | 45414664 |
| XM_021602813.2 | False | 4157 | mRNA | 0.52 | 28 | 45341062 | 45414647 |
| XM_021602822.2 | True | 3554 | mRNA | 0.52 | 22 | 45346670 | 45414646 |
45,240,000
45,250,000
45,260,000
45,270,000
45,280,000
45,290,000
45,300,000
45,310,000
45,320,000
45,330,000
45,340,000
45,350,000
45,360,000
45,370,000
45,380,000
45,390,000
45,400,000
45,410,000
45,420,000
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| parvaa | LOC106573218 | coding | downstream | 4238 | 45304638 ~ 45321671 (-) |
| LOC110523724 | LOC106573217 | coding | downstream | 26038 | 45257236 ~ 45299871 (-) |
| LOC110523718 | LOC106573216 | coding | downstream | 69860 | 45250014 ~ 45256049 (-) |
| LOC110523666 | LOC106573213 | coding | downstream | 183594 | 45115903 ~ 45142315 (-) |
| LOC110520774 | NA | coding | downstream | 424298 | 44900676 ~ 44901611 (-) |
| LOC118964648 | NA | coding | upstream | 61989 | 45476653 ~ 45477841 (-) |
| LOC110523834 | LOC106573224 | coding | upstream | 61989 | 45476653 ~ 45587081 (-) |
| LOC110523892 | LOC106573278 | coding | upstream | 217507 | 45632171 ~ 45680658 (-) |
| LOC110523903 | LOC106573225 | coding | upstream | 315571 | 45730235 ~ 45867098 (-) |
| LOC110523913 | LOC106573227 | coding | upstream | 573282 | 45987946 ~ 46025205 (-) |
| G49456 | NA | non-coding | downstream | 1337 | 45323205 ~ 45324572 (-) |
| G49524 | NA | non-coding | downstream | 81916 | 45243773 ~ 45243993 (-) |
| G49510 | NA | non-coding | downstream | 104990 | 45220667 ~ 45220919 (-) |
| G49489 | NA | non-coding | downstream | 126968 | 45198606 ~ 45198941 (-) |
| G49459 | LOC108441480 | non-coding | upstream | 21008 | 45435672 ~ 45451731 (-) |
| G49619 | NA | non-coding | upstream | 61899 | 45476563 ~ 45479422 (-) |
| G49759 | NA | non-coding | upstream | 284492 | 45699156 ~ 45699878 (-) |
| G49777 | NA | non-coding | upstream | 309495 | 45724159 ~ 45724388 (-) |
| G49817 | NA | non-coding | upstream | 377488 | 45792152 ~ 45793197 (-) |
| tspan9a | LOC106573177 | other | downstream | 2196880 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 6303884 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 7134173 | 38187488 ~ 38191736 (-) |
| G40732 | NA | other | downstream | 7200184 | 38125280 ~ 38125725 (-) |
| G40079 | NA | other | downstream | 7608876 | 37716540 ~ 37717033 (-) |
| G49774 | NA | other | upstream | 306141 | 45720805 ~ 45721124 (-) |
| G49962 | NA | other | upstream | 534294 | 45948958 ~ 45949951 (-) |
| G51214 | NA | other | upstream | 1650110 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 1874275 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 1962977 | 47377641 ~ 47378543 (-) |
