XLOC_019753 (ublcp1)


Basic Information

Item Value
gene id XLOC_019753
gene name ublcp1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 35304974 ~ 35325541 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00038883
tgtacATAGTTTGTGTGCAAATCACAATAAGCATGTAAGGAAAATCTGTTAAAtgagatcatttgaatcaaatatttgcaaaattatcatacattgcaatataaataattctgacttcaactgtaaatatcgATGCATGTATTGTGCACAAGGGTGGTTTGTGGTTTATGACATGCTGACGTGCAAATAACAGAAAACTGTCCTTCACAGCTCGTCCACCAGCATGTCAGTTTCGGTTATTATCAAGTGGGGAGGGCAGGAGTACTCCATTAATACGCTGTCCGAGGAAGACACTGTGCTGGATCTGAAACAGTCCATTAAATCGCTCACAGGAGTCCTGCCAGAAAGACAAAAGCTCCTGGGGTTGAAACTGAAAGGTAAACCAGCGGATGATAATGTCAAACTGGGTGACTTGAAGTTGAAGCCCAATACCAAAATTATGATGATGGGCACCCGAGAGGAAAGTCTGGAAGATGTGTTGGCGCCTCCACCAGAAAATGATGATGTTGTCAATGACTTTGACATTGAAGAGGAAGTGACTGAGGTTGAAAACAGAGAGGAGAATTTGGCCAAAATAGCTCGCCGGGTGAAAGATTATAAAGTTGAGGAGTTAAATCCCCCAAGGCCAGGAAAAAGATTGCTTGTTCTAGATATTGATTACACACTCTTTGATCATAAGTCATGTGCAGAGACAGGCCATGAGCTGATGAGACCATTCTTGCACGAGTTTCTTACATCGGCATATGAGGACTTTGATATTGTCATCTGGTCTGCAACAAGTATGAAGTGGATTGATGCTAAAATGAAAGAATTGGGGGTGACGGACAACCCTAACTACAAGATCACCTTCATGTTGGACAGTGCAGCTATGATCACTGTACACACACCTAAAAGAGGAGTCGTAGAGGTGAAGCCTTTGGGAGTCATATGGGGTAAATATAGTGAGTTCTACAACAGAAAGAACACAATCATGTTCGATGACATTGGAAGAAACTTCCTTATGAATCCACAGAATGGACTGAAGATCAGACCTTTCATGAAGGCACATTTAAACCGCGAGAAGGACAAAGAGCTCTACAAACTGTCTCAGTATCTGAAGGAAATCGCTAAACTTGATGACTTCTCAGGTCTTAACCACAAGCACTGGGAAAGGTACCTCTCAAAGAAGCAGAATCAATGACATCTTCAGCACTGAAGAGAAGTtgtgtctcaaaaaaaaaaaaggtttgagtTTGGAAACTCTTGTTCGCAGATCAGCTTCTCTTTGTTTTGCATCCATTATCTTACACGTCTTTATAGTGGGTCGTTACTGgaggatgaaaaaaaaagaaattctagCACTGCTCAAAAACAGTGGTTACCTCAACATGTCAGTAAAAAGCATTCAGGCAAGCATGACGATCCTCTTACCTCACTTCCTGCCTGATCACACTTCTTCCTATAAGTAAACTGGTAATATGGAAATTAGAATTTGTTGTTCATATCTAATTGGAATAGTAGTGCATATGATGTCGTTTTTGTTTTCCCAAATTTTCAGCTTGACGTTCAAAGCTCTTtagagcaatggtctcaaacccaattcctggagggccgcagctctgcatagtttagctccagccaCGTCCACCTGCCTAATAGCACgttgtagtcttgaacacctagattagttagatcagctgtgtttgattagggttggaacagaaccctgcagagctgtggctctccagAAATCAAATTTGAGACCTATGTTTGAGTGTCTTTGTGTTTATGGAAGTTTGGTTCTGCTTtggaatacaaaaataaaacattttttgtctaATTGTTTTATCACTTTGCAGAAAAAAAGCTTCCATACTTAATTATCAATTAATAAAGAGCTTTGAATGCTACAGAATGGTAAACccgtattttttttctcaaaaggaaaaaaaatccgAATTCCAAAGAGAAGTTATTTcaaactgcagaaaaaaaacgaGGTTTATAAGTGAACACGCTTTTTCAGCTTCGTTTCAAATCTCCAAAACGAACAATAAAGGACAGGAGTCATGTTTAcatgcatgttttgttttatcactaaCATAATATGCTAACTGGATGGTGTGATGTAAGTTTGTATGGTCACTTAAATGGTCACATGACTTAAGGGAGATAAATGTGTCATATCAAAGTAGCCtgaccaacttttttttttttatctgtctaGTCATAGCATTGAAGCTTGTCGATATTTCCACCCTCCAGTTTGTGTTTTTTGTCATTAACTCAGTAGATATTATTGTAACCGTATTGCATTTTGTGTAACTGCATTGCAGCCAGTGCTCAAATGTGGGCGTTGGGTTTACTGATGGAACCTTAAAAATGgacatttaaattaaatggttTTACAGTA
>TCONS_00038884
GAACAAAGCAAATCTTGTGGTACCCAAAGCAGTCAGCCTGAGCTTGAATGAACTGCCTATTATCTCGTCCACCAGCATGTCAGTTTCGGTTATTATCAAGTGGGGAGGGCAGGAGTACTCCATTAATACGCTGTCCGAGGAAGACACTGTGCTGGATCTGAAACAGTCCATTAAATCGCTCACAGGAGTCCTGCCAGAAAGACAAAAGCTCCTGGGGTTGAAACTGAAAGGTAAACCAGCGGATGATAATGTCAAACTGGGTGACTTGAAGTTGAAGCCCAATACCAAAATTATGATGATGGGCACCCGAGAGGAAAGTCTGGAAGATGTGTTGGCGCCTCCACCAGAAAATGATGATGTTGTCAATGACTTTGACATTGAAGAGGAAGTGACTGAGGTTGAAAACAGAGAGGAGAATTTGGCCAAAATAGCTCGCCGGGTGAAAGATTATAAAGTTGAGGAGTTAAATCCCCCAAGGCCAGGAAAAAGATTGCTTGTTCTAGATATTGATTACACACTCTTTGATCATAAGTCATGTGCAGAGACAGGCCATGAGCTGATGAGACCATTCTTGCACGAGTTTCTTACATCGGCATATGAGGACTTTGATATTGTCATCTGGTCTGCAACAAGTATGAAGTGGATTGATGCTAAAATGAAAGAATTGGGGGTGACGGACAACCCTAACTACAAGATCACCTTCATGTTGGACAGTGCAGCTATGATCACTGTACACACACCTAAAAGAGGAGTCGTAGAGGTGAAGCCTTTGGGAGTCATATGGGGTAAATATAGTGAGTTCTACAACAGAAAGAACACAATCATGTTCGATGACATTGGAAGAAACTTCCTTATGAATCCACAGAATGGACTGAAGATCAGACCTTTCATGAAGGCACATTTAAACCGCGAGAAGGACAAAGAGCTCTACAAACTGTCTCAGTATCTGAAGGAAATCGCTAAACTTGATGACTTCTCAGGTCTTAACCACAAGCACTGGGAAAGGTACCTCTCAAAGAAGCAGAATCAATGACATCTTCAGCACTGAAGAGAAGTtgtgtctcaaaaaaaaaaaaggtttgagtTTGGAAACTCTTGTTCGCAGATCAGCTTCTCTTTGTTTTGCATCCATTATCTTACACGTCTTTATAGTGGGTCGTTACTGgaggatgaaaaaaaaagaaattctagCACTGCTCAAAAACAGTGGTTACCTCAACATGTCAGTAAAAAGCATTCAGGCAAGCATGACGATCCTCTTACCTCACTTCCTGCCTGATCACACTTCTTCCTATAAGTAAACTGGTAATATGGAAATTAGAATTTGTTGTTCATATCTAATTGGAATAGTAGTGCATATGATGTCGTTTTTGTTTTCCCAAATTTTCAGCTTGACGTTCAAAGCTCTTtagagcaatggtctcaaacccaattcctggagggccgcagctctgcatagtttagctccagccaCGTCCACCTGCCTAATAGCACgttgtagtcttgaacacctagattagttagatcagctgtgtttgattagggttggaacagaaccctgcagagctgtggctctccagAAATCAAATTTGAGACCTATGTTTGAGTGTCTTTGTGTTTATGGAAGTTTGGTTCTGCTTtggaatacaaaaataaaacattttttgtctaATTGTTTTATCACTTTGCAGAAAAAAAGCTTCCATACTTAATTATCAATTAATAAAGAGCTTTGAATGCTACAGAATGGTAAACccgtattttttttctcaaaaggaaaaaaaatccgAATTCCAAAGAGAAGTTATTTcaaactgcagaaaaaaaacgaGGTTTATAAGTGAACACGCTTTTTCAGCTTCGTTTCAAATCTCCAAAACGAACAATAAAGGACAGGAGTCATGTTTAcatgcatgttttgttttatcactaaCATAATATGCTAACTGGATGGTGTGATGTAAGTTTGTATGGTCACTTAAATGGTCACATGACTTAAGGGAGATAAATGTGTCATATCAAAGTAGCCtgaccaacttttttttttttatctgtctaGTCATAGCATTGAAGCTTGTCGATATTTCCACCCTCCAGTTTGTGTTTTTTGTCATTAACTCAGTAGATATTATTGTAACCGTATTGCATTTTGTGTAACTGCATTGCAGCCAGTGCTCAAATGTGGGCGTTGGGTTTACTGATGGAACCTTAAAAATGgacatttaaattaaatggttTTACAGTA
>TCONS_00038885
AAAGCAAATCTTGTGGTACCCAAAGCAGTCAGCCTGAGCTTGAATGAACTGCCTATTATatATGTAGCACCTGACCCATTTGTCTTGTGTATTGACCACCAGTGGACCTCTACTGTTGCTTATGTTGGTGTAGTGTTGCCAAGCTCGTCCACCAGCATGTCAGTTTCGGTTATTATCAAGTGGGGAGGGCAGGAGTACTCCATTAATACGCTGTCCGAGGAAGACACTGTGCTGGATCTGAAACAGTCCATTAAATCGCTCACAGGAGTCCTGCCAGAAAGACAAAAGCTCCTGGGGTTGAAACTGAAAGGTAAACCAGCGGATGATAATGTCAAACTGGGTGACTTGAAGTTGAAGCCCAATACCAAAATTATGATGATGGGCACCCGAGAGGAAAGTCTGGAAGATGTGTTGGCGCCTCCACCAGAAAATGATGATGTTGTCAATGACTTTGACATTGAAGAGGAAGTGACTGAGGTTGAAAACAGAGAGGAGAATTTGGCCAAAATAGCTCGCCGGGTGAAAGATTATAAAGTTGAGGAGTTAAATCCCCCAAGGCCAGGAAAAAGATTGCTTGTTCTAGATATTGATTACACACTCTTTGATCATAAGTCATGTGCAGAGACAGGCCATGAGCTGATGAGACCATTCTTGCACGAGTTTCTTACATCGGCATATGAGGACTTTGATATTGTCATCTGGTCTGCAACAAGTATGAAGTGGATTGATGCTAAAATGAAAGAATTGGGGGTGACGGACAACCCTAACTACAAGATCACCTTCATGTTGGACAGTGCAGCTATGATCACTGTACACACACCTAAAAGAGGAGTCGTAGAGGTGAAGCCTTTGGGAGTCATATGGGGTAAATATAGTGAGTTCTACAACAGAAAGAACACAATCATGTTCGATGACATTGGAAGAAACTTCCTTATGAATCCACAGAATGGACTGAAGATCAGACCTTTCATGAAGGCACATTTAAACCGCGAGAAGGACAAAGAGCTCTACAAACTGTCTCAGTATCTGAAGGAAATCGCTAAACTTGATGACTTCTCAGGTCTTAACCACAAGCACTGGGAAAGGTACCTCTCAAAGAAGCAGAATCAATGACATCTTCAGCACTGAAGAGAAGTtgtgtctcaaaaaaaaaaaagTGGGTCGTTACTGgaggatgaaaaaaaaagaaattctagCACTGCTCAAAAACAGTGGTTACCTCAACATgaaaaaaaatccgAATTCCAAAGAGAAGTTATTTcaaactgcagaaaaaaaacgaGGTTTATAAGTGAACACGCTTTTTCAGCTTCGTTTCAAATCTCCAAAACGAACAATAAAGGACAGGAGTCATGTTTAcatgcatgttttgttttatcactaaCATAATATGCTAACTGGATGGTGTGATGTAAGTTTGTATGGTCACTTAAATGGTCACATGACTTAAGGGAGATAAATGTGTCATATCAAAGTAGCCtgaccaacttttttttttttatctgtctaGTCATAGCATTGAAGCTTGTCGATATTTCCACCCTCCAGTTTGTGTTTTTTGTCATTAACTCAGTAGATATTATTGTAACCGTATTGCATTTTGTGTAACTGCATTGCAGCCAGTGCTCAAATGTGGGCGTTGGGTTTACTGATGGAACCTTAAAAATGgacatttaaattaaatggttTTACAGT
>TCONS_00038886
AACAAAGCAAATCTTGTGGTACCCAAAGCAGTCAGCCTGAGCTTGAATGAACTGCCTATTATatATGTAGCACCTGACCCATTTGTCTTGTGTATTGACCACCAGTGGACCTCTACTGTTGCTTATGTTGGTGTAGTGTTGCCAAGCTCGTCCACCAGCATGTCAGTTTCGGTTATTATCAAGTGGGGAGGGCAGGAGTACTCCATTAATACGCTGTCCGAGGAAGACACTGTGCTGGATCTGAAACAGTCCATTAAATCGCTCACAGGAGTCCTGCCAGAAAGACAAAAGCTCCTGGGGTTGAAACTGAAAGGTAAACCAGCGGATGATAATGTCAAACTGGGTGACTTGAAGTTGAAGCCCAATACCAAAATTATGATGATGGGCACCCGAGAGGAAAGTCTGGAAGATGTGTTGGCGCCTCCACCAGAAAATGATGATGTTGTCAATGACTTTGACATTGAAGAGGAAGTGACTGAGGTTGAAAACAGAGAGGAGAATTTGGCCAAAATAGCTCGCCGGGTGAAAGATTATAAAGTTGAGGAGTTAAATCCCCCAAGGCCAGGAAAAAGATTGCTTGTTCTAGATATTGATTACACACTCTTTGATCATAAGTCATGTGCAGAGACAGGCCATGAGCTGATGAGACCATTCTTGCACGAGTTTCTTACATCGGCATATGAGGACTTTGATATTGTCATCTGGTCTGCAACAAGTATGAAGTGGATTGATGCTAAAATGAAAGAATTGGGGGTGACGGACAACCCTAACTACAAGATCACCTTCATGTTGGACAGTGCAGCTATGATCACTGTACACACACCTAAAAGAGGAGTCGTAGAGGTGAAGCCTTTGGGAGTCATATGGGGTAAATATAGTGAGTTCTACAACAGAAAGAACACAATCATGTTCGATGACATTGGAAGAAACTTCCTTATGAATCCACAGAATGGACTGAAGATCAGACCTTTCATGAAGGCACATTTAAACCGCGAGAAGGACAAAGAGCTCTACAAACTGTCTCAGTATCTGAAGGAAATCGCTAAACTTGATGACTTCTCAGGTCTTAACCACAAGCACTGGGAAAGGTACCTCTCAAAGAAGCAGAATCAATGACATCTTCAGCACTGAAGAGAAGTtgtgtctcaaaaaaaaaaaaggtttgagtTTGGAAACTCTTGTTCGCAGATCAGCTTCTCTTTGTTTTGCATCCATTATCTTACACGTCTTTATAGTGGGTCGTTACTGgaggatgaaaaaaaaagaaattctagCACTGCTCAAAAACAGTGGTTACCTCAACATGTCAGTAAAAAGCATTCAGGCAAGCATGACGATCCTCTTACCTCACTTCCTGCCTGATCACACTTCTTCCTATAAGTAAACTGGTAATATGGAAATTAGAATTTGTTGTTCATATCTAATTGGAATAGTAGTGCATATGATGTCGTTTTTGTTTTCCCAAATTTTCAGCTTGACGTTCAAAGCTCTTtagagcaatggtctcaaacccaattcctggagggccgcagctctgcatagtttagctccagccaCGTCCACCTGCCTAATAGCACgttgtagtcttgaacacctagattagttagatcagctgtgtttgattagggttggaacagaaccctgcagagctgtggctctccagAAATCAAATTTGAGACCTATGTTTGAGTGTCTTTGTGTTTATGGAAGTTTGGTTCTGCTTtggaatacaaaaataaaacattttttgtctaATTGTTTTATCACTTTGCAGAAAAAAAGCTTCCATACTTAATTATCAATTAATAAAGAGCTTTGAATGCTACAGAATGGTAAACccgtattttttttctcaaaaggaaaaaaaatccgAATTCCAAAGAGAAGTTATTTcaaactgcagaaaaaaaacgaGGTTTATAAGTGAACACGCTTTTTCAGCTTCGTTTCAAATCTCCAAAACGAACAATAAAGGACAGGAGTCATGTTTAcatgcatgttttgttttatcactaaCATAATATGCTAACTGGATGGTGTGATGTAAGTTTGTATGGTCACTTAAATGGTCACATGACTTAAGGGAGATAAATGTGTCATATCAAAGTAGCCtgaccaacttttttttttttatctgtctaGTCATAGCATTGAAGCTTGTCGATATTTCCACCCTCCAGTTTGTGTTTTTTGTCATTAACTCAGTAGATATTATTGTAACCGTATTGCATTTTGTGTAACTGCATTGCAGCCAGTGCTCAAATGTGGGCGTTGGGTTTACTGATGGAACCTTAAAAATGgacatttaaattaaatggttTTACA
>TCONS_00038887
GTGGTACCCAAAGCAGTCAGCCTGAGCTTGAATGAACTGCCTATTATCTCGTCCACCAGCATGTCAGTTTCGGTTATTATCAAGTGGGGAGGGCAGGAGTACTCCATTAATACGCTGTCCGAGGAAGACACTGTGCTGGATCTGAAACAGTCCATTAAATCGCTCACAGGAGTCCTGCCAGAAAGACAAAAGCTCCTGGGGTTGAAACTGAAAGGTAAACCAGCGGATGATAATGTCAAACTGGGTGACTTGAAGTTGAAGCCCAATACCAAAATTATGATGATGGGCACCCGAGAGGAAAGTCTGGAAGATGTGTTGGCGCCTCCACCAGAAAATGATGATGTTGTCAATGACTTTGACATTGAAGAGGAAGTGACTGAGGTTGAAAACAGAGAGGAGAATTTGGCCAAAATAGCTCGCCGGGTGAAAGATTATAAAGTTGAGGAGTTAAATCCCCCAAGGCCAGGAAAAAGATTGCTTGTTCTAGATATTGATTACACACTCTTTGATCATAAGTCATGTGCAGAGACAGGCCATGAGCTGATGAGACCATTCTTGCACGAGTTTCTTACATCGGCATATGAGGACTTTGATATTGTCATCTGGTCTGCAACAAGTATGAAGTGGATTGATGCTAAAATGAAAGAATTGGGGGTGACGGACAACCCTAACTACAAGATCACCTTCATGTTGGACAGTGCAGCTATGATCACTGTACACACACCTAAAAGAGGAGTCGTA
>TCONS_00038888
CCTTACCCTATTCTTCTTCTCAGCGTGGTTTAGATTGTTTCAGGATGAAATGATTAGAGAAATTAACAGCGTCGTTACGACAGCTAGATCACACCCAATTAATGCATTAAGCATGCAAAATAACTTAATGAGTTCAAAAAGCTAAGTAGCTAATACATACATGCTTGTTCAAGCATCAACATTCCACATCCATCCATCAAGATCTTTAACAAAATATGTTcgatATGTAGCACCTGACCCATTTGTCTTGTGTATTGACCACCAGTGGACCTCTACTGTTGCTTATGTTGGTGTAGTGTTGCCAAGCTCGTCCACCAGCATGTCAGTTTCGGTTATTATCAAGTGGGGAGGGCAGGAGTACTCCATTAATACGCTGTCCGAGGAAGACACT

Function

symbol description
ublcp1 Predicted to enable protein serine/threonine phosphatase activity. Predicted to be involved in protein dephosphorylation. Predicted to be active in nucleus. Orthologous to human UBLCP1 (ubiquitin like domain containing CTD phosphatase 1).

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0005634 nucleus cellular_component
GO:0016787 hydrolase activity molecular_function
GO:0004721 phosphoprotein phosphatase activity molecular_function
GO:0004722 protein serine/threonine phosphatase activity molecular_function

KEGG:

id description
ko01009 Protein phosphatases and associated proteins

ZFIN:

id description
ZDB-GENE-040718-3 Predicted to enable protein serine/threonine phosphatase activity. Predicted to be involved in protein dephosphorylation. Predicted to be active in nucleus. Orthologous to human UBLCP1 (ubiquitin like domain containing CTD phosphatase 1).

Ensembl:

ensembl_id ENSDARG00000044492

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00038883 False 2392 mRNA 0.39 10 35304974 35324091
TCONS_00038884 False 2245 mRNA 0.40 11 35304974 35325541
TCONS_00038885 False 1695 mRNA 0.41 14 35304975 35325537
TCONS_00038886 False 2325 mRNA 0.40 12 35304977 35325540
TCONS_00038887 False 741 mRNA 0.45 8 35312209 35325525
TCONS_00038888 True 391 mRNA 0.41 3 35323797 35325466

Neighbor

gene id symbol gene type direction distance location
XLOC_019752 adrb2b coding downstream 222259 35078766 ~ 35082715 (-)
XLOC_019751 lipia coding downstream 332102 34945033 ~ 34972872 (-)
XLOC_019750 kif20a coding downstream 378236 34879268 ~ 34926738 (-)
XLOC_019749 zgc:56585 coding downstream 460658 34835811 ~ 34844316 (-)
XLOC_019748 dacha coding downstream 646708 34364456 ~ 34658266 (-)
XLOC_019754 si:dkeyp-23e4.3 coding upstream 56902 35382443 ~ 35534401 (-)
XLOC_019755 NA coding upstream 319997 35645538 ~ 35650096 (-)
XLOC_019756 sgcd coding upstream 326643 35652184 ~ 35853245 (-)
XLOC_019757 NA coding upstream 728943 36054484 ~ 36055407 (-)
XLOC_019758 mrpl22 coding upstream 1056419 36381960 ~ 36396334 (-)
XLOC_019743 NA non-coding downstream 1658094 33637162 ~ 33646880 (-)
XLOC_019742 NA non-coding downstream 1827011 33465275 ~ 33477963 (-)
XLOC_019740 NA non-coding downstream 2158449 33145252 ~ 33146525 (-)
XLOC_019739 CU019662.2 non-coding downstream 2167891 33136948 ~ 33137083 (-)
XLOC_019737 zgc:194629 non-coding downstream 2214770 33058625 ~ 33090204 (-)
XLOC_019765 BX649250.1 non-coding upstream 1747410 37072951 ~ 37073080 (-)
XLOC_019768 NA non-coding upstream 2253205 37578746 ~ 37582114 (-)
XLOC_019769 NA non-coding upstream 2268810 37594351 ~ 37632708 (-)

Expression


Co-expression Network