Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964698 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 46901321 ~ 46902393 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051918.1 | False | 258 | mRNA | 0.48 | 3 | 46901321 | 46902393 |
| TU57171 | True | 203 | lncRNA | 0.38 | 2 | 46901662 | 46902038 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110524028 | LOC106561496 | coding | downstream | 61768 | 46817056 ~ 46839553 (-) |
| LOC110524015 | LOC106573241 | coding | downstream | 158288 | 46737435 ~ 46743033 (-) |
| tcp11l1 | tcp11l1 | coding | downstream | 804214 | 46085582 ~ 46097107 (-) |
| LOC110523921 | LOC106573228 | coding | downstream | 824580 | 46025778 ~ 46076741 (-) |
| LOC110523913 | LOC106573227 | coding | downstream | 876116 | 45987946 ~ 46025205 (-) |
| LOC118964697 | NA | coding | upstream | 43655 | 46946048 ~ 46947526 (-) |
| LOC118964694 | NA | coding | upstream | 70376 | 46972769 ~ 46974689 (-) |
| LOC118964693 | NA | coding | upstream | 135026 | 47037419 ~ 47038580 (-) |
| LOC118964691 | NA | coding | upstream | 188845 | 47091238 ~ 47093901 (-) |
| LOC118964692 | NA | coding | upstream | 215461 | 47117854 ~ 47119664 (-) |
| G51149 | NA | non-coding | downstream | 43623 | 46853827 ~ 46857698 (-) |
| G51123 | NA | non-coding | downstream | 86496 | 46814594 ~ 46814825 (-) |
| G51122 | NA | non-coding | downstream | 86946 | 46813954 ~ 46814375 (-) |
| G51078 | NA | non-coding | downstream | 87744 | 46781766 ~ 46813577 (-) |
| G51038 | NA | non-coding | downstream | 96268 | 46798561 ~ 46805053 (-) |
| G51165 | NA | non-coding | upstream | 21635 | 46924028 ~ 46967388 (-) |
| G51175 | NA | non-coding | upstream | 66052 | 46968445 ~ 46969145 (-) |
| G51181 | NA | non-coding | upstream | 75064 | 46977457 ~ 46982373 (-) |
| G51184 | NA | non-coding | upstream | 88555 | 46990948 ~ 47045352 (-) |
| G51193 | NA | non-coding | upstream | 112911 | 47015304 ~ 47067386 (-) |
| G49962 | NA | other | downstream | 951370 | 45948958 ~ 45949951 (-) |
| G49774 | NA | other | downstream | 1180197 | 45720805 ~ 45721124 (-) |
| tspan9a | LOC106573177 | other | downstream | 3772292 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 7879296 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 8709585 | 38187488 ~ 38191736 (-) |
| G51214 | NA | other | upstream | 162381 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 386546 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 475248 | 47377641 ~ 47378543 (-) |
| LOC110524104 | LOC106573248 | other | upstream | 639983 | 47541224 ~ 47561223 (-) |
| LOC110524264 | LOC106573263 | other | upstream | 1391715 | 48291626 ~ 48304829 (-) |
