LOC118964694


Basic Information

Item Value
gene id LOC118964694
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46972769 ~ 46974689 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051909.1
gatactacgaaattggggaggaaaaggggtaaaattccccccccaaaaaccccccaaaaatactgcatagtttcctatgaacgcgaagcgaggcgaccatctctgtcagtTAGTGTATTTCCAACCATGCCAGCACAGAACGGTTCCGTTTGGATTGTACAGAAAAAGGTTAGGATccaccctgatggagtctgcctTCATTTCAGCATGGTATTGCGCGTTCCCCTCTCACTACATGGCTGTATCTGTAGGGTTTGTGTGGCTGTAGCCGTCCCTCTCATACCATATTCAATAGGCTTGAATAACATccaccctgatggagtctgcctTAATTTCAGCATGGTATTGCGTGTTCCCCTCTCACTACATGGCTGTATCTGTAGGGTTTGTGTGGCTGTAGCCGTCCCTCTCATACCATATTCAACAGCACAGCTGTTATAAACCTGCATTTTTAGTTGCTCCAACAGTTATCGCTTATGGATTGGTTCATAGGTTGGATTGGGTGAAACTGACATGATTCCCACTGATGTTTTCCAGGAGAGATGTCAGCGATTCGGGCCAATGACCAAGGGAAAGCTGGGACAAAAGAGAGAAATGGATGCTGCGGCCACTGATTGCGCATCAGAGAATGACTCTGAGAAAGAGGAGTCATCTGAAGAATCCTATGAAGAAAATCTGACCGGTATGCCTATACCTTACATACACATGGAcctattcttaattacaatgtcCTTTTCAACATGTTTTCCAGGAGAGATGTCAGCGATTCGGGCCAAACAACCACTGACCAAGGGAAGACTGGGACAAAAGAGAGGCTCACACGGTGACAAAGGAACAAAAAGGTATTGGTCGACAATAGAGGTGGATGCAGTTGAAGATTCCTTGATGAACTTTATCCGAATGGGGAAAAATGCCTGGAAAACAAGACTGTGAGAAATGCATTGCTGCTTCTCCCCAAGCGCTAGTAAACAGGGACTGGAGAGCAGTACAGTTCTATAGACACAACAGAATAGTTGCAGATCAGAGAAAATAAGTGTATGAGATGCTTCTGGCTATCTCATAGGCAGATGACAAATGTCCTCTATCTCACTGTTCAGGGGAAGTTTTTCCTGGTGGATGGttcacgaggtgagatcttgcatggagccccagatcgagggtgattgaccgtcatcttgaacttcttccattttcttttaattgcgccaacagttgttgccttctcaccaagctgattgcata

Function

NR:

description
PREDICTED: uncharacterized protein LOC109140015 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051909.1 True 1242 mRNA 0.46 3 46972769 46974689

Neighbor

gene id symbol gene type direction distance location
LOC118964697 NA coding downstream 25243 46946048 ~ 46947526 (-)
LOC118964698 NA coding downstream 70376 46901321 ~ 46902393 (-)
LOC110524028 LOC106561496 coding downstream 133216 46817056 ~ 46839553 (-)
LOC110524015 LOC106573241 coding downstream 229736 46737435 ~ 46743033 (-)
tcp11l1 tcp11l1 coding downstream 875662 46085582 ~ 46097107 (-)
LOC118964693 NA coding upstream 62730 47037419 ~ 47038580 (-)
LOC118964691 NA coding upstream 116549 47091238 ~ 47093901 (-)
LOC118964692 NA coding upstream 143165 47117854 ~ 47119664 (-)
LOC118964699 NA coding upstream 169733 47144422 ~ 47145496 (-)
LOC118964695 NA coding upstream 196725 47171414 ~ 47172690 (-)
G51175 NA non-coding downstream 3624 46968445 ~ 46969145 (-)
G51165 NA non-coding downstream 5381 46924028 ~ 46967388 (-)
G51160 NA non-coding downstream 60810 46900164 ~ 46911959 (-)
G51149 NA non-coding downstream 115071 46853827 ~ 46857698 (-)
G51181 NA non-coding upstream 2768 46977457 ~ 46982373 (-)
G51184 NA non-coding upstream 16259 46990948 ~ 47045352 (-)
G51193 NA non-coding upstream 40615 47015304 ~ 47067386 (-)
G51209 NA non-coding upstream 71514 47046203 ~ 47096286 (-)
G51137 NA non-coding upstream 99859 47074548 ~ 47123334 (-)
G49962 NA other downstream 1022818 45948958 ~ 45949951 (-)
G49774 NA other downstream 1251645 45720805 ~ 45721124 (-)
tspan9a LOC106573177 other downstream 3843740 42852829 ~ 43129052 (-)
G41868 NA other downstream 7950744 39021805 ~ 39022025 (-)
G40768 LOC106573348 other downstream 8781033 38187488 ~ 38191736 (-)
G51214 NA other upstream 90085 47064774 ~ 47236625 (-)
G51285 LOC106561952 other upstream 314250 47288939 ~ 47289681 (-)
G51649 LOC106573246 other upstream 402952 47377641 ~ 47378543 (-)
LOC110524104 LOC106573248 other upstream 567687 47541224 ~ 47561223 (-)
LOC110524264 LOC106573263 other upstream 1319419 48291626 ~ 48304829 (-)

Expression


Co-expression Network