LOC118964691


Basic Information

Item Value
gene id LOC118964691
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 47091238 ~ 47093901 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051906.1
TGCTGAGATTTTGATAGTTTTCAGGTTTTGAAGGGAGTTTTCACTGGATTTACTAGAAATGTGAAATTGACCTGGCAAGCCTGTCTCTGCCTGAGCATGATCACAACAAAAGTAGCTGTGCAGCACGTTTTttaaggaagaggaggatggttgCAGACGTTCGCATTCATGCAAGAAGGAGAGATGTCAGCGATTCGGGCCAATGACCAAGGGAAAGCTGGGACAAAAGAGGGGTTCACACGGAGAGATGTCAGCGATTCGGGCCAAACAACCAATAACCAAGGGAAGACTGGGACAAAAGAGAGGCTCACACGGTGACAAAGGAACAAAAAGGTATTGGTCGACAATAGAGGTGGATGCAGTTGAAGATTCCTTGATGAACTTTATCCGAATGGGGAAAAATGCCTGGAAAACAAGACTGTGAGAAATGCATTGCTGCTTCTCCCCAAGCGCTTTTAAACAGGGACTGGAGAGCAGTACAGTTCTATAGACACAACAGAATAGTTGCAGATCAGAGAAAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC109140015 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051906.1 True 521 mRNA 0.45 4 47091238 47093901

Neighbor

gene id symbol gene type direction distance location
LOC118964693 NA coding downstream 52658 47037419 ~ 47038580 (-)
LOC118964694 NA coding downstream 116549 46972769 ~ 46974689 (-)
LOC118964697 NA coding downstream 143712 46946048 ~ 46947526 (-)
LOC118964698 NA coding downstream 188845 46901321 ~ 46902393 (-)
LOC110524028 LOC106561496 coding downstream 251685 46817056 ~ 46839553 (-)
LOC118964692 NA coding upstream 23953 47117854 ~ 47119664 (-)
LOC118964699 NA coding upstream 50521 47144422 ~ 47145496 (-)
LOC118964695 NA coding upstream 77513 47171414 ~ 47172690 (-)
LOC118964696 NA coding upstream 112602 47206503 ~ 47207921 (-)
LOC118964701 NA coding upstream 137002 47230903 ~ 47231586 (-)
G51193 NA non-coding downstream 23852 47015304 ~ 47067386 (-)
G51184 NA non-coding downstream 45886 46990948 ~ 47045352 (-)
G51181 NA non-coding downstream 108865 46977457 ~ 46982373 (-)
G51175 NA non-coding downstream 122093 46968445 ~ 46969145 (-)
G51165 NA non-coding downstream 123850 46924028 ~ 46967388 (-)
G51229 NA non-coding upstream 15234 47109135 ~ 47138083 (-)
G51236 NA non-coding upstream 35338 47129239 ~ 47163592 (-)
LOC110524061 LOC106573279 non-coding upstream 48623 47142524 ~ 47286344 (-)
G51246 NA non-coding upstream 95895 47189796 ~ 47219519 (-)
G51214 NA non-coding upstream 113482 47064774 ~ 47236625 (-)
G49962 NA other downstream 1141287 45948958 ~ 45949951 (-)
G49774 NA other downstream 1370114 45720805 ~ 45721124 (-)
tspan9a LOC106573177 other downstream 3962209 42852829 ~ 43129052 (-)
G41868 NA other downstream 8069213 39021805 ~ 39022025 (-)
G40768 LOC106573348 other downstream 8899502 38187488 ~ 38191736 (-)
G51285 LOC106561952 other upstream 195038 47288939 ~ 47289681 (-)
G51649 LOC106573246 other upstream 283740 47377641 ~ 47378543 (-)
LOC110524104 LOC106573248 other upstream 448475 47541224 ~ 47561223 (-)
LOC110524264 LOC106573263 other upstream 1200207 48291626 ~ 48304829 (-)
LOC110532382 LOC106573120 other upstream 1890284 48971580 ~ 49044257 (-)

Expression


Co-expression Network