LOC118964692



Basic Information


Item Value
gene id LOC118964692
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 47117854 ~ 47119664 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XR_005051907.1
TCACAACAAAAGTAGCTGTGCAGCACGTTTTttaaggaagaggaggatggttgCAGACGTTCGCATTCATGCAAGAAGGCACTGCAGAGTCTAAGAAGACGCATGGAAACTCTATAAGAAACATAATTCAATTTGTAGGCCagatttgaaaaggaaataataaaTCCTGAAGCTCAGATGTCAGACACCGAGGCTGCCAGTACCGTATACATAAGTTAGTGTCATTCAACACCAGCACATACTTTGGATACAAGACTGATGACTCAATAACTAGTATTGACAACAGTGAAGATGTTATGTCCCAGGGCCATCAGGTTCATCAGAGGAAGGCAATTTCTCTGAAAAAAATCTGACCGGTATGCCTATACCTTACATACACATGGACCTATTCTTATCTGATATGTCAGTGCATTTTCACTCTGtagtcaaataaaatgttattggtcacatgcacatggttagcagatgtttatacgagtgtagcgaaatgcttgtgtttctatttCTGATTTTGCAGTAATATcttacaagtaatctaacaatt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005051907.1 True 544 mRNA 0.39 4 47117854 47119664

Neighbor


gene id symbol gene type direction distance location
LOC118964691 NA coding downstream 23953 47091238 ~ 47093901 (-)
LOC118964693 NA coding downstream 79274 47037419 ~ 47038580 (-)
LOC118964694 NA coding downstream 143165 46972769 ~ 46974689 (-)
LOC118964697 NA coding downstream 170328 46946048 ~ 46947526 (-)
LOC118964698 NA coding downstream 215461 46901321 ~ 46902393 (-)
LOC118964699 NA coding upstream 24758 47144422 ~ 47145496 (-)
LOC118964695 NA coding upstream 51750 47171414 ~ 47172690 (-)
LOC118964696 NA coding upstream 86839 47206503 ~ 47207921 (-)
LOC118964701 NA coding upstream 111239 47230903 ~ 47231586 (-)
LOC110524061 LOC106573279 coding upstream 119468 47142524 ~ 47286344 (-)
G51209 NA non-coding downstream 21568 47046203 ~ 47096286 (-)
G51193 NA non-coding downstream 50468 47015304 ~ 47067386 (-)
G51184 NA non-coding downstream 72502 46990948 ~ 47045352 (-)
G51181 NA non-coding downstream 135481 46977457 ~ 46982373 (-)
G51175 NA non-coding downstream 148709 46968445 ~ 46969145 (-)
G51236 NA non-coding upstream 9575 47129239 ~ 47163592 (-)
G51246 NA non-coding upstream 70132 47189796 ~ 47219519 (-)
G51214 NA non-coding upstream 87719 47064774 ~ 47236625 (-)
G51261 NA non-coding upstream 133370 47253034 ~ 47254755 (-)
G49962 NA other downstream 1167903 45948958 ~ 45949951 (-)
G49774 NA other downstream 1396730 45720805 ~ 45721124 (-)
tspan9a LOC106573177 other downstream 3988825 42852829 ~ 43129052 (-)
G41868 NA other downstream 8095829 39021805 ~ 39022025 (-)
G40768 LOC106573348 other downstream 8926118 38187488 ~ 38191736 (-)
G51285 LOC106561952 other upstream 169275 47288939 ~ 47289681 (-)
G51649 LOC106573246 other upstream 257977 47377641 ~ 47378543 (-)
LOC110524104 LOC106573248 other upstream 422712 47541224 ~ 47561223 (-)
LOC110524264 LOC106573263 other upstream 1174444 48291626 ~ 48304829 (-)
LOC110532382 LOC106573120 other upstream 1864521 48971580 ~ 49044257 (-)

Expression



Co-expression Network