LOC118964710


Basic Information

Item Value
gene id LOC118964710
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 47596704 ~ 47604280 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051934.1
CTGAATAACGGGGCGTGGCTTTGGCCTAACTGCGTTGGCAAAAAGAAAGACGCGGTATTGCCTGGGGTAAACATTTGGGCGTCTACATGCTCATCCCTTGAACTGAACAATGCTAGCAAAAACAACCAGACACTACTGCACCTCAAATAATTTTCCAAGTTGGAATAATGTAAAGAGTCGTTTGGTGGGTTCGAAGAGTGGAACGTAAACTATAATGAAAGTTTAGACCAGACAGAGTCAGCATACAGGAGCTCTACAAGACATTACTTTATTCATGACAGGCAAGATAGCCACCATCTCCCATACTGCTACAGTAGCTGTCAGGAAGGCTAAGTACTGGACTGTCCACTTGTCTGAAACGTCATTACCAATTAATACTTTTTACCCAGACTTTTACACTCATTTACTTTGGCTGTGTGGACGTAGTGGGAATGGGGCTTCTCCCGCCACTCAAAACGGGCCCGAGCCTTGGTTTCTACAAGATAGATGCGACTAAATACACTACAACAATTCTAAGTGCATGGTTGCATGGGGTTGCACTGGCGTGGGATTATTCTGCTCTCTGGCCGCCTGGATGCCCTAATGGATGGAGCTGCCTACATGTGTGCTGCATGGGATAACTTTGCTACTagctactgtttgtgtgtgtgactttttGTGTCACTATGAAAATGGAACCAAAAGAGATCTCGGGATGGTGGGCCTGCTGTGTGTATGCAGAATAAAATAATTGACATAGGGTTCTGCTGTGACTTCAACAATGCTGACACTGAGAGGTTTACCCTTAAGGACAGAAGAATGGACTTCATTTAATAGAAGgcttcttcttctttggactttatatgacGGTTGgaaaccaactttaaggtgcattaccactaccaactggactggagtgtggacctcagctcatctttcaatcacccacgtgggtatatgctcctaaaaaacaATGAGGACATGGCATGGACATGGATATGCTCCTAAAACCCAatgagaagatgagagaggcgggacttgcagcgcatCAAGGATCACAAATATAAGTTTTATTTTAGCACCTGGCTACGCAGACGGTTGTTGAAGCGCGCAAACTGTGttggtgcaatgattgaataacatgtatgtatccatttattttgtgacgcgagcggtgtggtcagcatgtaatcgACGTATATCatgtgtacagtatatgactAATAAACAAACTTGAACTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051934.1 True 1221 mRNA 0.44 2 47596704 47604280

Neighbor

gene id symbol gene type direction distance location
LOC110524104 LOC106573248 coding downstream 35481 47541224 ~ 47561223 (-)
LOC110524061 LOC106573279 coding downstream 353498 47142524 ~ 47286344 (-)
LOC118964701 NA coding downstream 365118 47230903 ~ 47231586 (-)
LOC118964696 NA coding downstream 388783 47206503 ~ 47207921 (-)
LOC118964695 NA coding downstream 424014 47171414 ~ 47172690 (-)
LOC110524125 LOC106573250 coding upstream 29600 47633880 ~ 47689066 (-)
LOC110524148 LOC106573251 coding upstream 90902 47695182 ~ 47722400 (-)
LOC110532355 faap24 coding upstream 121333 47725613 ~ 47733539 (-)
LOC110524174 LOC106573254 coding upstream 181358 47785638 ~ 47788293 (-)
LOC110524205 LOC106573257 coding upstream 439212 48043492 ~ 48049196 (-)
G51652 NA non-coding downstream 212216 47383658 ~ 47384488 (-)
G51277 NA non-coding downstream 320356 47275397 ~ 47276348 (-)
G51261 NA non-coding downstream 341949 47253034 ~ 47254755 (-)
G51214 NA non-coding downstream 360079 47064774 ~ 47236625 (-)
G51246 NA non-coding downstream 377185 47189796 ~ 47219519 (-)
G51802 NA non-coding upstream 84840 47689120 ~ 47690770 (-)
G51899 LOC106573253 non-coding upstream 202274 47806554 ~ 47806900 (-)
G51914 NA non-coding upstream 222688 47826968 ~ 47830052 (-)
G51977 NA non-coding upstream 287198 47891478 ~ 47891884 (-)
G51993 NA non-coding upstream 296949 47901229 ~ 47901581 (-)
G51649 LOC106573246 other downstream 218161 47377641 ~ 47378543 (-)
G51285 LOC106561952 other downstream 307023 47288939 ~ 47289681 (-)
G49962 NA other downstream 1646753 45948958 ~ 45949951 (-)
LOC110524264 LOC106573263 other upstream 689828 48291626 ~ 48304829 (-)
LOC110532382 LOC106573120 other upstream 1379905 48971580 ~ 49044257 (-)
G55408 NA other upstream 2807354 50411634 ~ 50412128 (-)
G55627 NA other upstream 3161083 50765363 ~ 50767431 (-)
LOC110524514 borcs5 other upstream 3173467 50777716 ~ 50792069 (-)

Expression


Co-expression Network